RNA–Protein interactions for RNA: ENST00000594493.1

RPS11-202, Transcript of ribosomal protein S11, humanhuman

TSL 3 BASIC

Gene RPS11, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-202ENST00000594493 NISCHQ9Y2I1 1504 aa17.17■□□□□ 0.34
RPS11-202ENST00000594493 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
RPS11-202ENST00000594493 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
RPS11-202ENST00000594493 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
RPS11-202ENST00000594493 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.13
RPS11-202ENST00000594493 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
RPS11-202ENST00000594493 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
RPS11-202ENST00000594493 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
RPS11-202ENST00000594493 ABCC9O60706 1549 aa13.81□□□□□ -0.2
RPS11-202ENST00000594493 SCRIBQ14160 1630 aa13.77□□□□□ -0.21
RPS11-202ENST00000594493 NACADO15069 1562 aa13.7□□□□□ -0.22
RPS11-202ENST00000594493 RB1CC1Q8TDY2 1594 aa13.51□□□□□ -0.25
RPS11-202ENST00000594493 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
RPS11-202ENST00000594493 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
RPS11-202ENST00000594493 UNC13AQ9UPW8 1703 aa13.41□□□□□ -0.26
RPS11-202ENST00000594493 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
RPS11-202ENST00000594493 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
RPS11-202ENST00000594493 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
RPS11-202ENST00000594493 WIZO95785 1651 aa13.28□□□□□ -0.28
RPS11-202ENST00000594493 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
RPS11-202ENST00000594493 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
RPS11-202ENST00000594493 TOP2AP11388 1531 aaKnown RBP13.14□□□□□ -0.31
RPS11-202ENST00000594493 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
RPS11-202ENST00000594493 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
RPS11-202ENST00000594493 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
RPS11-202ENST00000594493 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
RPS11-202ENST00000594493 LOC105371045A0A1W2PR82 267 aa12.93□□□□□ -0.34
RPS11-202ENST00000594493 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
RPS11-202ENST00000594493 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
RPS11-202ENST00000594493 HRCP23327 699 aa12.83□□□□□ -0.36
RPS11-202ENST00000594493 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
RPS11-202ENST00000594493 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
RPS11-202ENST00000594493 FAM9AQ8IZU1 332 aaPredicted RBP12.78□□□□□ -0.36
RPS11-202ENST00000594493 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
RPS11-202ENST00000594493 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
RPS11-202ENST00000594493 EEA1Q15075 1411 aa12.71□□□□□ -0.37
RPS11-202ENST00000594493 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
RPS11-202ENST00000594493 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
RPS11-202ENST00000594493 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
RPS11-202ENST00000594493 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
RPS11-202ENST00000594493 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
RPS11-202ENST00000594493 KIF21BO75037 1637 aa12.63□□□□□ -0.39
RPS11-202ENST00000594493 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
RPS11-202ENST00000594493 SOGA1O94964 1423 aa12.61□□□□□ -0.39
RPS11-202ENST00000594493 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
RPS11-202ENST00000594493 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
RPS11-202ENST00000594493 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
RPS11-202ENST00000594493 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
RPS11-202ENST00000594493 RUSC2Q8N2Y8 1516 aa12.55□□□□□ -0.4
RPS11-202ENST00000594493 TNIKQ9UKE5 1360 aa12.55□□□□□ -0.4
RPS11-202ENST00000594493 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
RPS11-202ENST00000594493 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
RPS11-202ENST00000594493 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
RPS11-202ENST00000594493 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
RPS11-202ENST00000594493 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
RPS11-202ENST00000594493 CUX1P39880 1505 aa12.44□□□□□ -0.42
RPS11-202ENST00000594493 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
RPS11-202ENST00000594493 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
RPS11-202ENST00000594493 CFTRP13569 1480 aa12.41□□□□□ -0.42
RPS11-202ENST00000594493 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
RPS11-202ENST00000594493 RAPGEF2Q9Y4G8 1499 aa12.38□□□□□ -0.43
RPS11-202ENST00000594493 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
RPS11-202ENST00000594493 CLIP1P30622 1438 aa12.37□□□□□ -0.43
RPS11-202ENST00000594493 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
RPS11-202ENST00000594493 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
RPS11-202ENST00000594493 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
RPS11-202ENST00000594493 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
RPS11-202ENST00000594493 CADPSQ9ULU8 1353 aa12.24□□□□□ -0.45
RPS11-202ENST00000594493 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
RPS11-202ENST00000594493 FGD5Q6ZNL6 1462 aa12.22□□□□□ -0.45
RPS11-202ENST00000594493 TTBK1Q5TCY1 1321 aaPredicted RBP12.21□□□□□ -0.45
RPS11-202ENST00000594493 CUX2O14529 1486 aa12.2□□□□□ -0.46
RPS11-202ENST00000594493 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
RPS11-202ENST00000594493 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
RPS11-202ENST00000594493 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
RPS11-202ENST00000594493 CUL7Q14999 1698 aa12.16□□□□□ -0.46
RPS11-202ENST00000594493 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
RPS11-202ENST00000594493 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
RPS11-202ENST00000594493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
RPS11-202ENST00000594493 CFAP43Q8NDM7 1665 aa12.13□□□□□ -0.47
RPS11-202ENST00000594493 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
RPS11-202ENST00000594493 APLP2Q06481 763 aa12.12□□□□□ -0.47
RPS11-202ENST00000594493 ARHGAP35Q9NRY4 1499 aa12.12□□□□□ -0.47
RPS11-202ENST00000594493 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
RPS11-202ENST00000594493 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
RPS11-202ENST00000594493 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.47
RPS11-202ENST00000594493 NESP48681 1621 aa12.08□□□□□ -0.48
RPS11-202ENST00000594493 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
RPS11-202ENST00000594493 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
RPS11-202ENST00000594493 PCF11O94913 1555 aaKnown RBP12.06□□□□□ -0.48
RPS11-202ENST00000594493 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
RPS11-202ENST00000594493 IGF1RP08069 1367 aa12.05□□□□□ -0.48
RPS11-202ENST00000594493 EFCAB5A4FU69 1503 aa12.05□□□□□ -0.48
RPS11-202ENST00000594493 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
RPS11-202ENST00000594493 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
RPS11-202ENST00000594493 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
RPS11-202ENST00000594493 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.48
RPS11-202ENST00000594493 RRBP1Q9P2E9 1410 aaKnown RBP12.02□□□□□ -0.49
RPS11-202ENST00000594493 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
RPS11-202ENST00000594493 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms