RNA–Protein interactions for RNA: ENST00000270625.6

RPS11-201, Transcript of ribosomal protein S11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS11, Length 614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-201ENST00000270625 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
RPS11-201ENST00000270625 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
RPS11-201ENST00000270625 ABCC9O60706 1549 aa20.88■□□□□ 0.93
RPS11-201ENST00000270625 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
RPS11-201ENST00000270625 NACADO15069 1562 aa19.82■□□□□ 0.76
RPS11-201ENST00000270625 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
RPS11-201ENST00000270625 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
RPS11-201ENST00000270625 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
RPS11-201ENST00000270625 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
RPS11-201ENST00000270625 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
RPS11-201ENST00000270625 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
RPS11-201ENST00000270625 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
RPS11-201ENST00000270625 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
RPS11-201ENST00000270625 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
RPS11-201ENST00000270625 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
RPS11-201ENST00000270625 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
RPS11-201ENST00000270625 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
RPS11-201ENST00000270625 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
RPS11-201ENST00000270625 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
RPS11-201ENST00000270625 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
RPS11-201ENST00000270625 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
RPS11-201ENST00000270625 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
RPS11-201ENST00000270625 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
RPS11-201ENST00000270625 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
RPS11-201ENST00000270625 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
RPS11-201ENST00000270625 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
RPS11-201ENST00000270625 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
RPS11-201ENST00000270625 NESP48681 1621 aa17.99■□□□□ 0.47
RPS11-201ENST00000270625 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
RPS11-201ENST00000270625 CUX2O14529 1486 aa17.95■□□□□ 0.46
RPS11-201ENST00000270625 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
RPS11-201ENST00000270625 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
RPS11-201ENST00000270625 WIZO95785 1651 aa17.86■□□□□ 0.45
RPS11-201ENST00000270625 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
RPS11-201ENST00000270625 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
RPS11-201ENST00000270625 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
RPS11-201ENST00000270625 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
RPS11-201ENST00000270625 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
RPS11-201ENST00000270625 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
RPS11-201ENST00000270625 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
RPS11-201ENST00000270625 CFTRP13569 1480 aa17.58■□□□□ 0.41
RPS11-201ENST00000270625 WDR62O43379 1518 aa17.56■□□□□ 0.4
RPS11-201ENST00000270625 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
RPS11-201ENST00000270625 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RPS11-201ENST00000270625 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
RPS11-201ENST00000270625 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
RPS11-201ENST00000270625 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
RPS11-201ENST00000270625 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
RPS11-201ENST00000270625 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
RPS11-201ENST00000270625 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
RPS11-201ENST00000270625 ZNF608Q9ULD9 1512 aaPredicted RBP17.17■□□□□ 0.34
RPS11-201ENST00000270625 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
RPS11-201ENST00000270625 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
RPS11-201ENST00000270625 TRIM41Q8WV44 630 aa17.08■□□□□ 0.32
RPS11-201ENST00000270625 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
RPS11-201ENST00000270625 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
RPS11-201ENST00000270625 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
RPS11-201ENST00000270625 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32not detected■■■■■ 69
RPS11-201ENST00000270625 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
RPS11-201ENST00000270625 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
RPS11-201ENST00000270625 SOGA1O94964 1423 aa16.98■□□□□ 0.31
RPS11-201ENST00000270625 CUX1P39880 1505 aa16.97■□□□□ 0.31
RPS11-201ENST00000270625 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
RPS11-201ENST00000270625 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
RPS11-201ENST00000270625 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
RPS11-201ENST00000270625 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
RPS11-201ENST00000270625 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
RPS11-201ENST00000270625 CHD1O14646 1710 aa16.91■□□□□ 0.3
RPS11-201ENST00000270625 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
RPS11-201ENST00000270625 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
RPS11-201ENST00000270625 FBLN2P98095 1184 aa16.87■□□□□ 0.29
RPS11-201ENST00000270625 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
RPS11-201ENST00000270625 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
RPS11-201ENST00000270625 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
RPS11-201ENST00000270625 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
RPS11-201ENST00000270625 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
RPS11-201ENST00000270625 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
RPS11-201ENST00000270625 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
RPS11-201ENST00000270625 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
RPS11-201ENST00000270625 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
RPS11-201ENST00000270625 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
RPS11-201ENST00000270625 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
RPS11-201ENST00000270625 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
RPS11-201ENST00000270625 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
RPS11-201ENST00000270625 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
RPS11-201ENST00000270625 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
RPS11-201ENST00000270625 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
RPS11-201ENST00000270625 GRIN2AQ12879 1464 aa16.6■□□□□ 0.25
RPS11-201ENST00000270625 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
RPS11-201ENST00000270625 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
RPS11-201ENST00000270625 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
RPS11-201ENST00000270625 NUP160Q12769 1436 aa16.56■□□□□ 0.24
RPS11-201ENST00000270625 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
RPS11-201ENST00000270625 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
RPS11-201ENST00000270625 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
RPS11-201ENST00000270625 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
RPS11-201ENST00000270625 IGF1RP08069 1367 aa16.42■□□□□ 0.22
RPS11-201ENST00000270625 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
RPS11-201ENST00000270625 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
RPS11-201ENST00000270625 PRG4Q92954 1404 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms