RNA–Protein interactions for RNA: ENST00000599167.5

RPS11-204, Transcript of ribosomal protein S11, humanhuman

TSL 5

Gene RPS11, Length 1,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-204ENST00000599167 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
RPS11-204ENST00000599167 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
RPS11-204ENST00000599167 ABCC9O60706 1549 aa22.92■■□□□ 1.26
RPS11-204ENST00000599167 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
RPS11-204ENST00000599167 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
RPS11-204ENST00000599167 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
RPS11-204ENST00000599167 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
RPS11-204ENST00000599167 NACADO15069 1562 aa22.12■■□□□ 1.13
RPS11-204ENST00000599167 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
RPS11-204ENST00000599167 RB1CC1Q8TDY2 1594 aa21.94■■□□□ 1.1
RPS11-204ENST00000599167 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
RPS11-204ENST00000599167 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
RPS11-204ENST00000599167 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
RPS11-204ENST00000599167 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
RPS11-204ENST00000599167 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
RPS11-204ENST00000599167 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
RPS11-204ENST00000599167 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
RPS11-204ENST00000599167 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
RPS11-204ENST00000599167 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
RPS11-204ENST00000599167 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
RPS11-204ENST00000599167 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
RPS11-204ENST00000599167 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
RPS11-204ENST00000599167 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
RPS11-204ENST00000599167 WIZO95785 1651 aa20.64■□□□□ 0.9
RPS11-204ENST00000599167 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
RPS11-204ENST00000599167 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
RPS11-204ENST00000599167 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
RPS11-204ENST00000599167 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
RPS11-204ENST00000599167 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
RPS11-204ENST00000599167 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
RPS11-204ENST00000599167 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
RPS11-204ENST00000599167 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
RPS11-204ENST00000599167 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
RPS11-204ENST00000599167 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
RPS11-204ENST00000599167 CUX2O14529 1486 aa19.95■□□□□ 0.78
RPS11-204ENST00000599167 CFTRP13569 1480 aa19.91■□□□□ 0.78
RPS11-204ENST00000599167 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
RPS11-204ENST00000599167 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
RPS11-204ENST00000599167 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
RPS11-204ENST00000599167 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
RPS11-204ENST00000599167 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
RPS11-204ENST00000599167 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
RPS11-204ENST00000599167 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
RPS11-204ENST00000599167 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
RPS11-204ENST00000599167 NESP48681 1621 aa19.6■□□□□ 0.73
RPS11-204ENST00000599167 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
RPS11-204ENST00000599167 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
RPS11-204ENST00000599167 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
RPS11-204ENST00000599167 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
RPS11-204ENST00000599167 CUX1P39880 1505 aa19.53■□□□□ 0.72
RPS11-204ENST00000599167 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
RPS11-204ENST00000599167 EEA1Q15075 1411 aa19.49■□□□□ 0.71
RPS11-204ENST00000599167 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
RPS11-204ENST00000599167 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
RPS11-204ENST00000599167 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
RPS11-204ENST00000599167 KIF21AQ7Z4S6 1674 aa19.37■□□□□ 0.69
RPS11-204ENST00000599167 SOGA1O94964 1423 aa19.36■□□□□ 0.69
RPS11-204ENST00000599167 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
RPS11-204ENST00000599167 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
RPS11-204ENST00000599167 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
RPS11-204ENST00000599167 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
RPS11-204ENST00000599167 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
RPS11-204ENST00000599167 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
RPS11-204ENST00000599167 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
RPS11-204ENST00000599167 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
RPS11-204ENST00000599167 WDR62O43379 1518 aa19.23■□□□□ 0.67
RPS11-204ENST00000599167 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
RPS11-204ENST00000599167 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
RPS11-204ENST00000599167 KIF21BO75037 1637 aa19.17■□□□□ 0.66
RPS11-204ENST00000599167 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
RPS11-204ENST00000599167 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
RPS11-204ENST00000599167 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
RPS11-204ENST00000599167 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
RPS11-204ENST00000599167 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
RPS11-204ENST00000599167 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
RPS11-204ENST00000599167 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
RPS11-204ENST00000599167 IGF1RP08069 1367 aa19.06■□□□□ 0.64
RPS11-204ENST00000599167 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
RPS11-204ENST00000599167 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
RPS11-204ENST00000599167 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
RPS11-204ENST00000599167 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
RPS11-204ENST00000599167 CUL7Q14999 1698 aa18.98■□□□□ 0.63
RPS11-204ENST00000599167 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
RPS11-204ENST00000599167 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
RPS11-204ENST00000599167 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
RPS11-204ENST00000599167 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
RPS11-204ENST00000599167 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
RPS11-204ENST00000599167 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
RPS11-204ENST00000599167 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
RPS11-204ENST00000599167 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61not detected■■■■■ 69
RPS11-204ENST00000599167 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
RPS11-204ENST00000599167 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
RPS11-204ENST00000599167 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
RPS11-204ENST00000599167 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.61
RPS11-204ENST00000599167 ADAMTS12P58397 1594 aa18.82■□□□□ 0.6
RPS11-204ENST00000599167 MAGI1Q96QZ7 1491 aaPredicted RBP18.79■□□□□ 0.6
RPS11-204ENST00000599167 CLIP1P30622 1438 aa18.79■□□□□ 0.6
RPS11-204ENST00000599167 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
RPS11-204ENST00000599167 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
RPS11-204ENST00000599167 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms