RNA–Protein interactions for RNA: ENST00000332245.9

KLHDC3-203, Transcript of kelch domain containing 3, humanhuman

TSL 2 BASIC

Gene KLHDC3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-203ENST00000332245 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
KLHDC3-203ENST00000332245 ABCC9O60706 1549 aa32.76■■■□□ 2.83
KLHDC3-203ENST00000332245 CCDC180Q9P1Z9 1646 aa32.71■■■□□ 2.83
KLHDC3-203ENST00000332245 RB1CC1Q8TDY2 1594 aa31.2■■■□□ 2.59
KLHDC3-203ENST00000332245 NACADO15069 1562 aa31.01■■■□□ 2.56
KLHDC3-203ENST00000332245 DNAJC5BQ9UF47 199 aa30.89■■■□□ 2.54
KLHDC3-203ENST00000332245 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.53
KLHDC3-203ENST00000332245 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
KLHDC3-203ENST00000332245 MYO15BQ96JP2 1530 aa30.64■■■□□ 2.5
KLHDC3-203ENST00000332245 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
KLHDC3-203ENST00000332245 DCAF1Q9Y4B6 1507 aa30.43■■■□□ 2.46
KLHDC3-203ENST00000332245 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
KLHDC3-203ENST00000332245 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
KLHDC3-203ENST00000332245 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
KLHDC3-203ENST00000332245 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
KLHDC3-203ENST00000332245 CC2D2AQ9P2K1 1620 aa29.59■■■□□ 2.33
KLHDC3-203ENST00000332245 CECR2Q9BXF3 1484 aa29.57■■■□□ 2.32
KLHDC3-203ENST00000332245 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
KLHDC3-203ENST00000332245 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
KLHDC3-203ENST00000332245 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
KLHDC3-203ENST00000332245 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
KLHDC3-203ENST00000332245 DNAJC5Q9H3Z4 198 aa28.49■■■□□ 2.15
KLHDC3-203ENST00000332245 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
KLHDC3-203ENST00000332245 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
KLHDC3-203ENST00000332245 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
KLHDC3-203ENST00000332245 HMGXB3Q12766 1538 aa28.38■■■□□ 2.13
KLHDC3-203ENST00000332245 CUX2O14529 1486 aa28.33■■■□□ 2.13
KLHDC3-203ENST00000332245 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
KLHDC3-203ENST00000332245 PEG3Q9GZU2 1588 aa28.21■■■□□ 2.11
KLHDC3-203ENST00000332245 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
KLHDC3-203ENST00000332245 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
KLHDC3-203ENST00000332245 WIZO95785 1651 aa28.14■■■□□ 2.09
KLHDC3-203ENST00000332245 NESP48681 1621 aa28.13■■■□□ 2.09
KLHDC3-203ENST00000332245 LAMC3Q9Y6N6 1575 aa27.96■■■□□ 2.07
KLHDC3-203ENST00000332245 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
KLHDC3-203ENST00000332245 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
KLHDC3-203ENST00000332245 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
KLHDC3-203ENST00000332245 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
KLHDC3-203ENST00000332245 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
KLHDC3-203ENST00000332245 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
KLHDC3-203ENST00000332245 MRC2Q9UBG0 1479 aa27.56■■■□□ 2
KLHDC3-203ENST00000332245 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
KLHDC3-203ENST00000332245 WDR62O43379 1518 aa27.49■■□□□ 1.99
KLHDC3-203ENST00000332245 CFTRP13569 1480 aa27.45■■□□□ 1.99
KLHDC3-203ENST00000332245 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
KLHDC3-203ENST00000332245 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
KLHDC3-203ENST00000332245 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
KLHDC3-203ENST00000332245 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
KLHDC3-203ENST00000332245 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
KLHDC3-203ENST00000332245 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
KLHDC3-203ENST00000332245 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
KLHDC3-203ENST00000332245 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
KLHDC3-203ENST00000332245 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
KLHDC3-203ENST00000332245 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
KLHDC3-203ENST00000332245 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
KLHDC3-203ENST00000332245 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
KLHDC3-203ENST00000332245 CUX1P39880 1505 aa26.63■■□□□ 1.85
KLHDC3-203ENST00000332245 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
KLHDC3-203ENST00000332245 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.853e-8■■■■■ 30.9
KLHDC3-203ENST00000332245 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
KLHDC3-203ENST00000332245 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
KLHDC3-203ENST00000332245 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
KLHDC3-203ENST00000332245 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
KLHDC3-203ENST00000332245 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
KLHDC3-203ENST00000332245 SOGA1O94964 1423 aa26.54■■□□□ 1.84
KLHDC3-203ENST00000332245 WRNQ14191 1432 aaPredicted RBP eCLIP26.51■■□□□ 1.838e-8■■■■■ 71
KLHDC3-203ENST00000332245 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
KLHDC3-203ENST00000332245 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
KLHDC3-203ENST00000332245 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
KLHDC3-203ENST00000332245 FBLN2P98095 1184 aa26.47■■□□□ 1.83
KLHDC3-203ENST00000332245 TOP2BQ02880 1626 aa26.45■■□□□ 1.82
KLHDC3-203ENST00000332245 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
KLHDC3-203ENST00000332245 BIVM-ERCC5R4GMW8 1640 aa26.45■■□□□ 1.82
KLHDC3-203ENST00000332245 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
KLHDC3-203ENST00000332245 CHD1O14646 1710 aa26.41■■□□□ 1.82
KLHDC3-203ENST00000332245 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
KLHDC3-203ENST00000332245 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
KLHDC3-203ENST00000332245 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
KLHDC3-203ENST00000332245 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
KLHDC3-203ENST00000332245 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
KLHDC3-203ENST00000332245 ARAP1Q96P48 1450 aa26.28■■□□□ 1.8
KLHDC3-203ENST00000332245 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
KLHDC3-203ENST00000332245 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.78
KLHDC3-203ENST00000332245 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.78
KLHDC3-203ENST00000332245 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
KLHDC3-203ENST00000332245 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
KLHDC3-203ENST00000332245 ABCA5Q8WWZ7 1642 aa26.08■■□□□ 1.77
KLHDC3-203ENST00000332245 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
KLHDC3-203ENST00000332245 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
KLHDC3-203ENST00000332245 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
KLHDC3-203ENST00000332245 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
KLHDC3-203ENST00000332245 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
KLHDC3-203ENST00000332245 NUP160Q12769 1436 aa25.88■■□□□ 1.73
KLHDC3-203ENST00000332245 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
KLHDC3-203ENST00000332245 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
KLHDC3-203ENST00000332245 IGF1RP08069 1367 aa25.84■■□□□ 1.73
KLHDC3-203ENST00000332245 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
KLHDC3-203ENST00000332245 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
KLHDC3-203ENST00000332245 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
KLHDC3-203ENST00000332245 SHROOM2Q13796 1616 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms