RNA–Protein interactions for RNA: ENST00000602252.5

RPS11-209, Transcript of ribosomal protein S11, humanhuman

TSL 2

Gene RPS11, Length 751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-209ENST00000602252 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
RPS11-209ENST00000602252 ABCC9O60706 1549 aa18.59■□□□□ 0.57
RPS11-209ENST00000602252 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
RPS11-209ENST00000602252 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
RPS11-209ENST00000602252 DNAJC5BQ9UF47 199 aa17.56■□□□□ 0.4
RPS11-209ENST00000602252 NACADO15069 1562 aa17.49■□□□□ 0.39
RPS11-209ENST00000602252 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
RPS11-209ENST00000602252 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
RPS11-209ENST00000602252 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
RPS11-209ENST00000602252 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
RPS11-209ENST00000602252 BICRAQ9NZM4 1560 aa17.18■□□□□ 0.34
RPS11-209ENST00000602252 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
RPS11-209ENST00000602252 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.32
RPS11-209ENST00000602252 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
RPS11-209ENST00000602252 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
RPS11-209ENST00000602252 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
RPS11-209ENST00000602252 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
RPS11-209ENST00000602252 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
RPS11-209ENST00000602252 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
RPS11-209ENST00000602252 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
RPS11-209ENST00000602252 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
RPS11-209ENST00000602252 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
RPS11-209ENST00000602252 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
RPS11-209ENST00000602252 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
RPS11-209ENST00000602252 CUX2O14529 1486 aa16■□□□□ 0.15
RPS11-209ENST00000602252 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
RPS11-209ENST00000602252 NESP48681 1621 aa15.98■□□□□ 0.15
RPS11-209ENST00000602252 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
RPS11-209ENST00000602252 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
RPS11-209ENST00000602252 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
RPS11-209ENST00000602252 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
RPS11-209ENST00000602252 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
RPS11-209ENST00000602252 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
RPS11-209ENST00000602252 PDS5BQ9NTI5 1447 aa15.7■□□□□ 0.1
RPS11-209ENST00000602252 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
RPS11-209ENST00000602252 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
RPS11-209ENST00000602252 WIZO95785 1651 aa15.69■□□□□ 0.1
RPS11-209ENST00000602252 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
RPS11-209ENST00000602252 RSF1Q96T23 1441 aaPredicted RBP15.59■□□□□ 0.09
RPS11-209ENST00000602252 WDR62O43379 1518 aa15.56■□□□□ 0.08
RPS11-209ENST00000602252 CFTRP13569 1480 aa15.52■□□□□ 0.07
RPS11-209ENST00000602252 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
RPS11-209ENST00000602252 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
RPS11-209ENST00000602252 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
RPS11-209ENST00000602252 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
RPS11-209ENST00000602252 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
RPS11-209ENST00000602252 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
RPS11-209ENST00000602252 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
RPS11-209ENST00000602252 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
RPS11-209ENST00000602252 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
RPS11-209ENST00000602252 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
RPS11-209ENST00000602252 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
RPS11-209ENST00000602252 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
RPS11-209ENST00000602252 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
RPS11-209ENST00000602252 EIF4G3O43432 1585 aaKnown RBP15.09■□□□□ 0.01
RPS11-209ENST00000602252 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.01not detected■■■■■ 69
RPS11-209ENST00000602252 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
RPS11-209ENST00000602252 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
RPS11-209ENST00000602252 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
RPS11-209ENST00000602252 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
RPS11-209ENST00000602252 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
RPS11-209ENST00000602252 ARHGEF11O15085 1522 aa15.04■□□□□ -0
RPS11-209ENST00000602252 RAD54L2Q9Y4B4 1467 aa15.03■□□□□ -0
RPS11-209ENST00000602252 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
RPS11-209ENST00000602252 SOGA1O94964 1423 aa14.98□□□□□ -0.01
RPS11-209ENST00000602252 CHD1O14646 1710 aa14.96□□□□□ -0.01
RPS11-209ENST00000602252 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
RPS11-209ENST00000602252 CUX1P39880 1505 aa14.95□□□□□ -0.02
RPS11-209ENST00000602252 FBLN2P98095 1184 aa14.94□□□□□ -0.02
RPS11-209ENST00000602252 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
RPS11-209ENST00000602252 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
RPS11-209ENST00000602252 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
RPS11-209ENST00000602252 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
RPS11-209ENST00000602252 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
RPS11-209ENST00000602252 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
RPS11-209ENST00000602252 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
RPS11-209ENST00000602252 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
RPS11-209ENST00000602252 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
RPS11-209ENST00000602252 SYNJ2O15056 1496 aa14.8□□□□□ -0.04
RPS11-209ENST00000602252 GAPVD1Q14C86 1478 aa14.79□□□□□ -0.04
RPS11-209ENST00000602252 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
RPS11-209ENST00000602252 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
RPS11-209ENST00000602252 ABCA5Q8WWZ7 1642 aa14.75□□□□□ -0.05
RPS11-209ENST00000602252 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
RPS11-209ENST00000602252 PBRM1Q86U86 1689 aa14.74□□□□□ -0.05
RPS11-209ENST00000602252 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
RPS11-209ENST00000602252 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
RPS11-209ENST00000602252 GRIN2AQ12879 1464 aa14.66□□□□□ -0.06
RPS11-209ENST00000602252 ERCC6L2Q5T890 1561 aa14.65□□□□□ -0.06
RPS11-209ENST00000602252 BIVM-ERCC5R4GMW8 1640 aa14.65□□□□□ -0.06
RPS11-209ENST00000602252 NUP160Q12769 1436 aa14.65□□□□□ -0.06
RPS11-209ENST00000602252 ADAMTS12P58397 1594 aa14.64□□□□□ -0.07
RPS11-209ENST00000602252 CEP170Q5SW79 1584 aa14.62□□□□□ -0.07
RPS11-209ENST00000602252 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
RPS11-209ENST00000602252 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
RPS11-209ENST00000602252 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
RPS11-209ENST00000602252 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
RPS11-209ENST00000602252 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
RPS11-209ENST00000602252 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
RPS11-209ENST00000602252 IGF1RP08069 1367 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms