RNA–Protein interactions for RNA: ENST00000600027.5

RPS11-206, Transcript of ribosomal protein S11, humanhuman

TSL 5

Gene RPS11, Length 944 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-206ENST00000600027 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
RPS11-206ENST00000600027 ABCC9O60706 1549 aa23.89■■□□□ 1.41
RPS11-206ENST00000600027 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
RPS11-206ENST00000600027 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
RPS11-206ENST00000600027 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
RPS11-206ENST00000600027 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
RPS11-206ENST00000600027 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
RPS11-206ENST00000600027 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
RPS11-206ENST00000600027 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
RPS11-206ENST00000600027 NACADO15069 1562 aa22.13■■□□□ 1.13
RPS11-206ENST00000600027 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
RPS11-206ENST00000600027 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
RPS11-206ENST00000600027 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
RPS11-206ENST00000600027 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
RPS11-206ENST00000600027 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
RPS11-206ENST00000600027 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
RPS11-206ENST00000600027 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
RPS11-206ENST00000600027 CC2D2AQ9P2K1 1620 aa21.56■■□□□ 1.04
RPS11-206ENST00000600027 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
RPS11-206ENST00000600027 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
RPS11-206ENST00000600027 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
RPS11-206ENST00000600027 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
RPS11-206ENST00000600027 CUX2O14529 1486 aa20.9■□□□□ 0.94
RPS11-206ENST00000600027 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
RPS11-206ENST00000600027 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
RPS11-206ENST00000600027 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
RPS11-206ENST00000600027 WIZO95785 1651 aa20.64■□□□□ 0.9
RPS11-206ENST00000600027 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
RPS11-206ENST00000600027 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
RPS11-206ENST00000600027 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
RPS11-206ENST00000600027 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
RPS11-206ENST00000600027 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
RPS11-206ENST00000600027 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
RPS11-206ENST00000600027 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
RPS11-206ENST00000600027 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
RPS11-206ENST00000600027 NESP48681 1621 aa20.35■□□□□ 0.85
RPS11-206ENST00000600027 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
RPS11-206ENST00000600027 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
RPS11-206ENST00000600027 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
RPS11-206ENST00000600027 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
RPS11-206ENST00000600027 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
RPS11-206ENST00000600027 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
RPS11-206ENST00000600027 CFTRP13569 1480 aa19.91■□□□□ 0.78
RPS11-206ENST00000600027 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
RPS11-206ENST00000600027 WDR62O43379 1518 aa19.86■□□□□ 0.77
RPS11-206ENST00000600027 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
RPS11-206ENST00000600027 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
RPS11-206ENST00000600027 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
RPS11-206ENST00000600027 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
RPS11-206ENST00000600027 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
RPS11-206ENST00000600027 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.73
RPS11-206ENST00000600027 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.73
RPS11-206ENST00000600027 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.73
RPS11-206ENST00000600027 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
RPS11-206ENST00000600027 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
RPS11-206ENST00000600027 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
RPS11-206ENST00000600027 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
RPS11-206ENST00000600027 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
RPS11-206ENST00000600027 CUX1P39880 1505 aa19.53■□□□□ 0.72
RPS11-206ENST00000600027 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
RPS11-206ENST00000600027 EEA1Q15075 1411 aa19.49■□□□□ 0.71
RPS11-206ENST00000600027 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
RPS11-206ENST00000600027 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
RPS11-206ENST00000600027 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
RPS11-206ENST00000600027 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
RPS11-206ENST00000600027 SOGA1O94964 1423 aa19.36■□□□□ 0.69
RPS11-206ENST00000600027 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
RPS11-206ENST00000600027 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
RPS11-206ENST00000600027 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
RPS11-206ENST00000600027 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
RPS11-206ENST00000600027 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
RPS11-206ENST00000600027 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
RPS11-206ENST00000600027 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
RPS11-206ENST00000600027 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
RPS11-206ENST00000600027 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
RPS11-206ENST00000600027 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
RPS11-206ENST00000600027 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
RPS11-206ENST00000600027 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
RPS11-206ENST00000600027 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
RPS11-206ENST00000600027 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
RPS11-206ENST00000600027 KIF21BO75037 1637 aa19.17■□□□□ 0.66
RPS11-206ENST00000600027 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
RPS11-206ENST00000600027 CHD1O14646 1710 aa19.14■□□□□ 0.66
RPS11-206ENST00000600027 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
RPS11-206ENST00000600027 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
RPS11-206ENST00000600027 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
RPS11-206ENST00000600027 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
RPS11-206ENST00000600027 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
RPS11-206ENST00000600027 IGF1RP08069 1367 aa19.06■□□□□ 0.64
RPS11-206ENST00000600027 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.64not detected■■■■■ 69
RPS11-206ENST00000600027 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
RPS11-206ENST00000600027 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
RPS11-206ENST00000600027 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
RPS11-206ENST00000600027 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
RPS11-206ENST00000600027 FBLN2P98095 1184 aa18.99■□□□□ 0.63
RPS11-206ENST00000600027 CUL7Q14999 1698 aa18.98■□□□□ 0.63
RPS11-206ENST00000600027 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
RPS11-206ENST00000600027 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
RPS11-206ENST00000600027 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
RPS11-206ENST00000600027 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms