Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SPDYE9P-201ENST00000570642 692 ntBASIC16.97■□□□□ 0.31
FAM228BP0C875 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.97■□□□□ 0.31
FAM228BP0C875 SPDYE10P-202ENST00000612005 668 ntBASIC16.97■□□□□ 0.31
FAM228BP0C875 SPDYE8P-202ENST00000612377 668 ntBASIC16.97■□□□□ 0.31
FAM228BP0C875 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.97■□□□□ 0.31
FAM228BP0C875 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.97■□□□□ 0.31
FAM228BP0C875 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.97■□□□□ 0.31
FAM228BP0C875 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FAM228BP0C875 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.97■□□□□ 0.31
FAM228BP0C875 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FAM228BP0C875 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.96■□□□□ 0.31
FAM228BP0C875 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.96■□□□□ 0.31
FAM228BP0C875 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.96■□□□□ 0.31
FAM228BP0C875 AC099063.4-201ENST00000641099 1602 ntBASIC16.96■□□□□ 0.31
FAM228BP0C875 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.96■□□□□ 0.31
FAM228BP0C875 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
FAM228BP0C875 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.96■□□□□ 0.31
FAM228BP0C875 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.96■□□□□ 0.31
FAM228BP0C875 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
FAM228BP0C875 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.96■□□□□ 0.31
FAM228BP0C875 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.96■□□□□ 0.31
FAM228BP0C875 AL139010.1-201ENST00000454878 894 ntBASIC16.96■□□□□ 0.31
FAM228BP0C875 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.96■□□□□ 0.31
FAM228BP0C875 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.96■□□□□ 0.31
FAM228BP0C875 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.96■□□□□ 0.31
FAM228BP0C875 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.96■□□□□ 0.31
FAM228BP0C875 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.96■□□□□ 0.31
FAM228BP0C875 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.96■□□□□ 0.31
FAM228BP0C875 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FAM228BP0C875 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
FAM228BP0C875 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
FAM228BP0C875 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.96■□□□□ 0.3
FAM228BP0C875 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FAM228BP0C875 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FAM228BP0C875 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
FAM228BP0C875 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
FAM228BP0C875 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.95■□□□□ 0.3
FAM228BP0C875 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
FAM228BP0C875 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 MCCD1P2-201ENST00000423228 335 ntBASIC16.95■□□□□ 0.3
FAM228BP0C875 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.95■□□□□ 0.3
FAM228BP0C875 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.95■□□□□ 0.3
FAM228BP0C875 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.95■□□□□ 0.3
FAM228BP0C875 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
FAM228BP0C875 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.95■□□□□ 0.3
FAM228BP0C875 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
FAM228BP0C875 AC097359.3-201ENST00000603982 1210 ntBASIC16.95■□□□□ 0.3
FAM228BP0C875 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.95■□□□□ 0.3
FAM228BP0C875 AC084121.4-201ENST00000641598 221 ntBASIC16.95■□□□□ 0.3
FAM228BP0C875 AF228730.8-201ENST00000642140 221 ntBASIC16.95■□□□□ 0.3
FAM228BP0C875 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FAM228BP0C875 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
FAM228BP0C875 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FAM228BP0C875 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FAM228BP0C875 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
FAM228BP0C875 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM228BP0C875 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms