RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
PCCB-204ENST00000462637 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
PCCB-204ENST00000462637 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
PCCB-204ENST00000462637 ABCC9O60706 1549 aa29.24■■■□□ 2.27
PCCB-204ENST00000462637 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
PCCB-204ENST00000462637 DCAF1Q9Y4B6 1507 aa28.85■■■□□ 2.21
PCCB-204ENST00000462637 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
PCCB-204ENST00000462637 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
PCCB-204ENST00000462637 NACADO15069 1562 aa28.49■■■□□ 2.15
PCCB-204ENST00000462637 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.13
PCCB-204ENST00000462637 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
PCCB-204ENST00000462637 UNC13AQ9UPW8 1703 aa27.63■■■□□ 2.01
PCCB-204ENST00000462637 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
PCCB-204ENST00000462637 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
PCCB-204ENST00000462637 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
PCCB-204ENST00000462637 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
PCCB-204ENST00000462637 CECR2Q9BXF3 1484 aa27.08■■□□□ 1.93
PCCB-204ENST00000462637 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
PCCB-204ENST00000462637 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
PCCB-204ENST00000462637 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
PCCB-204ENST00000462637 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
PCCB-204ENST00000462637 WIZO95785 1651 aa26.66■■□□□ 1.86
PCCB-204ENST00000462637 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
PCCB-204ENST00000462637 ATAD2BQ9ULI0 1458 aa26.5■■□□□ 1.83
PCCB-204ENST00000462637 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
PCCB-204ENST00000462637 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
PCCB-204ENST00000462637 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
PCCB-204ENST00000462637 CC2D2AQ9P2K1 1620 aa26.4■■□□□ 1.82
PCCB-204ENST00000462637 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
PCCB-204ENST00000462637 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PCCB-204ENST00000462637 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
PCCB-204ENST00000462637 HMGXB3Q12766 1538 aa26.2■■□□□ 1.78
PCCB-204ENST00000462637 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
PCCB-204ENST00000462637 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
PCCB-204ENST00000462637 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
PCCB-204ENST00000462637 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
PCCB-204ENST00000462637 CFTRP13569 1480 aa25.64■■□□□ 1.69
PCCB-204ENST00000462637 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
PCCB-204ENST00000462637 NESP48681 1621 aa25.54■■□□□ 1.68
PCCB-204ENST00000462637 LOC105371045A0A1W2PR82 267 aa25.51■■□□□ 1.67
PCCB-204ENST00000462637 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
PCCB-204ENST00000462637 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.67
PCCB-204ENST00000462637 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
PCCB-204ENST00000462637 EEA1Q15075 1411 aa25.36■■□□□ 1.65
PCCB-204ENST00000462637 FANCD2Q9BXW9 1451 aa25.35■■□□□ 1.65
PCCB-204ENST00000462637 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
PCCB-204ENST00000462637 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
PCCB-204ENST00000462637 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
PCCB-204ENST00000462637 SOGA1O94964 1423 aa25.25■■□□□ 1.63
PCCB-204ENST00000462637 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
PCCB-204ENST00000462637 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
PCCB-204ENST00000462637 CSRNP3Q8WYN3 585 aa25.15■■□□□ 1.62
PCCB-204ENST00000462637 CUX1P39880 1505 aa25.14■■□□□ 1.62
PCCB-204ENST00000462637 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
PCCB-204ENST00000462637 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
PCCB-204ENST00000462637 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
PCCB-204ENST00000462637 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
PCCB-204ENST00000462637 URB2Q14146 1524 aaKnown RBP25.04■■□□□ 1.6
PCCB-204ENST00000462637 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
PCCB-204ENST00000462637 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
PCCB-204ENST00000462637 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
PCCB-204ENST00000462637 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
PCCB-204ENST00000462637 KIF21BO75037 1637 aa24.95■■□□□ 1.58
PCCB-204ENST00000462637 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.58
PCCB-204ENST00000462637 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
PCCB-204ENST00000462637 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
PCCB-204ENST00000462637 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
PCCB-204ENST00000462637 WDR62O43379 1518 aa24.85■■□□□ 1.57
PCCB-204ENST00000462637 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
PCCB-204ENST00000462637 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
PCCB-204ENST00000462637 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
PCCB-204ENST00000462637 CEP162Q5TB80 1403 aa24.81■■□□□ 1.56
PCCB-204ENST00000462637 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
PCCB-204ENST00000462637 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
PCCB-204ENST00000462637 CUX2O14529 1486 aa24.75■■□□□ 1.55
PCCB-204ENST00000462637 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
PCCB-204ENST00000462637 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
PCCB-204ENST00000462637 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
PCCB-204ENST00000462637 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
PCCB-204ENST00000462637 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
PCCB-204ENST00000462637 TRIM26Q12899 539 aaPredicted RBP24.62■■□□□ 1.53
PCCB-204ENST00000462637 IGF1RP08069 1367 aa24.62■■□□□ 1.53
PCCB-204ENST00000462637 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
PCCB-204ENST00000462637 CLIP1P30622 1438 aa24.57■■□□□ 1.52
PCCB-204ENST00000462637 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.522e-6■■■■□ 22.2
PCCB-204ENST00000462637 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
PCCB-204ENST00000462637 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
PCCB-204ENST00000462637 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
PCCB-204ENST00000462637 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.51
PCCB-204ENST00000462637 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
PCCB-204ENST00000462637 CUL7Q14999 1698 aa24.41■■□□□ 1.5
PCCB-204ENST00000462637 VPS8Q8N3P4 1428 aa24.4■■□□□ 1.5
PCCB-204ENST00000462637 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
PCCB-204ENST00000462637 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
PCCB-204ENST00000462637 RANGAP1P46060 587 aaPredicted RBP24.3■■□□□ 1.48
PCCB-204ENST00000462637 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
PCCB-204ENST00000462637 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
PCCB-204ENST00000462637 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
PCCB-204ENST00000462637 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
PCCB-204ENST00000462637 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms