RNA–Protein interactions for RNA: ENST00000272317.10

RPS27A-201, Transcript of ribosomal protein S27a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS27A, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-201ENST00000272317 NISCHQ9Y2I1 1504 aa40.47■■■■■ 4.07
RPS27A-201ENST00000272317 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
RPS27A-201ENST00000272317 ABCC9O60706 1549 aa35.53■■■■□ 3.28
RPS27A-201ENST00000272317 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
RPS27A-201ENST00000272317 RB1CC1Q8TDY2 1594 aa34.01■■■■□ 3.03
RPS27A-201ENST00000272317 NACADO15069 1562 aa33.94■■■■□ 3.02
RPS27A-201ENST00000272317 MYO15BQ96JP2 1530 aa33.69■■■□□ 2.98
RPS27A-201ENST00000272317 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
RPS27A-201ENST00000272317 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
RPS27A-201ENST00000272317 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
RPS27A-201ENST00000272317 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
RPS27A-201ENST00000272317 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
RPS27A-201ENST00000272317 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
RPS27A-201ENST00000272317 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
RPS27A-201ENST00000272317 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.82
RPS27A-201ENST00000272317 EIF4G1Q04637 1599 aaKnown RBP32.14■■■□□ 2.74
RPS27A-201ENST00000272317 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
RPS27A-201ENST00000272317 CECR2Q9BXF3 1484 aa31.97■■■□□ 2.71
RPS27A-201ENST00000272317 NCAPD3P42695 1498 aa31.42■■■□□ 2.62
RPS27A-201ENST00000272317 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
RPS27A-201ENST00000272317 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
RPS27A-201ENST00000272317 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
RPS27A-201ENST00000272317 SMARCA2P51531 1590 aa31.26■■■□□ 2.6
RPS27A-201ENST00000272317 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
RPS27A-201ENST00000272317 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
RPS27A-201ENST00000272317 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
RPS27A-201ENST00000272317 BAZ1BQ9UIG0 1483 aaKnown RBP31.07■■■□□ 2.56
RPS27A-201ENST00000272317 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
RPS27A-201ENST00000272317 WIZO95785 1651 aa30.74■■■□□ 2.51
RPS27A-201ENST00000272317 NESP48681 1621 aa30.65■■■□□ 2.5
RPS27A-201ENST00000272317 ERCC6Q03468 1493 aa30.64■■■□□ 2.5
RPS27A-201ENST00000272317 CADPSQ9ULU8 1353 aa30.52■■■□□ 2.48
RPS27A-201ENST00000272317 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
RPS27A-201ENST00000272317 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
RPS27A-201ENST00000272317 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
RPS27A-201ENST00000272317 CUX2O14529 1486 aa30.38■■■□□ 2.45
RPS27A-201ENST00000272317 CFTRP13569 1480 aa30.24■■■□□ 2.43
RPS27A-201ENST00000272317 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
RPS27A-201ENST00000272317 THOC2Q8NI27 1593 aaKnown RBP30.12■■■□□ 2.41
RPS27A-201ENST00000272317 KIF21AQ7Z4S6 1674 aa30.11■■■□□ 2.41
RPS27A-201ENST00000272317 FANCD2Q9BXW9 1451 aa30.1■■■□□ 2.41
RPS27A-201ENST00000272317 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
RPS27A-201ENST00000272317 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
RPS27A-201ENST00000272317 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
RPS27A-201ENST00000272317 WDR62O43379 1518 aa29.91■■■□□ 2.38
RPS27A-201ENST00000272317 DNAJC5Q9H3Z4 198 aa29.87■■■□□ 2.37
RPS27A-201ENST00000272317 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
RPS27A-201ENST00000272317 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
RPS27A-201ENST00000272317 ABCC8Q09428 1581 aa29.6■■■□□ 2.33
RPS27A-201ENST00000272317 TOPBP1Q92547 1522 aa29.56■■■□□ 2.32
RPS27A-201ENST00000272317 IFT140Q96RY7 1462 aa29.47■■■□□ 2.31
RPS27A-201ENST00000272317 DNMBPQ6XZF7 1577 aa29.46■■■□□ 2.31
RPS27A-201ENST00000272317 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
RPS27A-201ENST00000272317 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
RPS27A-201ENST00000272317 SOGA1O94964 1423 aa29.28■■■□□ 2.28
RPS27A-201ENST00000272317 OSCARQ8IYS5 282 aa29.25■■■□□ 2.27
RPS27A-201ENST00000272317 CUX1P39880 1505 aa29.25■■■□□ 2.27
RPS27A-201ENST00000272317 RAD54L2Q9Y4B4 1467 aa29.22■■■□□ 2.27
RPS27A-201ENST00000272317 AQRO60306 1485 aaKnown RBP eCLIP29.2■■■□□ 2.263e-8■■■■■ 53.2
RPS27A-201ENST00000272317 FGD5Q6ZNL6 1462 aa29.2■■■□□ 2.26
RPS27A-201ENST00000272317 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
RPS27A-201ENST00000272317 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
RPS27A-201ENST00000272317 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
RPS27A-201ENST00000272317 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.246e-18■□□□□ 8
RPS27A-201ENST00000272317 FBLN2P98095 1184 aa28.98■■■□□ 2.23
RPS27A-201ENST00000272317 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
RPS27A-201ENST00000272317 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
RPS27A-201ENST00000272317 GRIN2BQ13224 1484 aa28.9■■■□□ 2.22
RPS27A-201ENST00000272317 TOP2BQ02880 1626 aa28.89■■■□□ 2.22
RPS27A-201ENST00000272317 GAPVD1Q14C86 1478 aa28.88■■■□□ 2.21
RPS27A-201ENST00000272317 CHMP7Q8WUX9 453 aaPredicted RBP28.86■■■□□ 2.21
RPS27A-201ENST00000272317 SYNJ1O43426 1573 aa28.86■■■□□ 2.21
RPS27A-201ENST00000272317 SNAPC4Q5SXM2 1469 aa28.85■■■□□ 2.21
RPS27A-201ENST00000272317 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
RPS27A-201ENST00000272317 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
RPS27A-201ENST00000272317 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
RPS27A-201ENST00000272317 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
RPS27A-201ENST00000272317 ABCA5Q8WWZ7 1642 aa28.71■■■□□ 2.19
RPS27A-201ENST00000272317 CHD1O14646 1710 aa28.68■■■□□ 2.18
RPS27A-201ENST00000272317 ARHGEF11O15085 1522 aa28.59■■■□□ 2.17
RPS27A-201ENST00000272317 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
RPS27A-201ENST00000272317 FHAD1B1AJZ9 1412 aa28.55■■■□□ 2.16
RPS27A-201ENST00000272317 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
RPS27A-201ENST00000272317 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
RPS27A-201ENST00000272317 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
RPS27A-201ENST00000272317 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
RPS27A-201ENST00000272317 CYB5RLQ6IPT4 315 aa28.52■■■□□ 2.16
RPS27A-201ENST00000272317 CLASP1Q7Z460 1538 aa28.5■■■□□ 2.15
RPS27A-201ENST00000272317 GRIN2AQ12879 1464 aa28.5■■■□□ 2.15
RPS27A-201ENST00000272317 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
RPS27A-201ENST00000272317 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
RPS27A-201ENST00000272317 IGF1RP08069 1367 aa28.45■■■□□ 2.14
RPS27A-201ENST00000272317 NUP160Q12769 1436 aa28.4■■■□□ 2.14
RPS27A-201ENST00000272317 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
RPS27A-201ENST00000272317 CEP170Q5SW79 1584 aa28.29■■■□□ 2.12
RPS27A-201ENST00000272317 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
RPS27A-201ENST00000272317 JPH4Q96JJ6 628 aa28.25■■■□□ 2.11
RPS27A-201ENST00000272317 CUL7Q14999 1698 aa28.15■■■□□ 2.1
RPS27A-201ENST00000272317 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
RPS27A-201ENST00000272317 PRG4Q92954 1404 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms