RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
RTL6-201ENST00000341255 NISCHQ9Y2I1 1504 aa26.65■■□□□ 1.86
RTL6-201ENST00000341255 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
RTL6-201ENST00000341255 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
RTL6-201ENST00000341255 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
RTL6-201ENST00000341255 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
RTL6-201ENST00000341255 APLP2Q06481 763 aa25.39■■□□□ 1.66
RTL6-201ENST00000341255 PCGF6Q9BYE7 350 aa25.3■■□□□ 1.64
RTL6-201ENST00000341255 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
RTL6-201ENST00000341255 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
RTL6-201ENST00000341255 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
RTL6-201ENST00000341255 ZEB1P37275 1124 aaPredicted RBP24.82■■□□□ 1.56
RTL6-201ENST00000341255 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
RTL6-201ENST00000341255 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
RTL6-201ENST00000341255 ERICH6Q7L0X2 663 aa24.65■■□□□ 1.54
RTL6-201ENST00000341255 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
RTL6-201ENST00000341255 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
RTL6-201ENST00000341255 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
RTL6-201ENST00000341255 YTHDC1Q96MU7 727 aaKnown RBP24.39■■□□□ 1.49
RTL6-201ENST00000341255 MYT1Q01538 1121 aa24.32■■□□□ 1.48
RTL6-201ENST00000341255 NEFLP07196 543 aa24.22■■□□□ 1.47
RTL6-201ENST00000341255 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
RTL6-201ENST00000341255 HRCP23327 699 aa24.14■■□□□ 1.45
RTL6-201ENST00000341255 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
RTL6-201ENST00000341255 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
RTL6-201ENST00000341255 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
RTL6-201ENST00000341255 ITGAEP38570 1179 aa23.61■■□□□ 1.37
RTL6-201ENST00000341255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.36
RTL6-201ENST00000341255 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.36
RTL6-201ENST00000341255 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
RTL6-201ENST00000341255 DAXXQ9UER7 740 aaPredicted RBP23.48■■□□□ 1.35
RTL6-201ENST00000341255 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
RTL6-201ENST00000341255 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
RTL6-201ENST00000341255 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
RTL6-201ENST00000341255 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
RTL6-201ENST00000341255 RTL5Q5HYW3 569 aaPredicted RBP23.11■■□□□ 1.29
RTL6-201ENST00000341255 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
RTL6-201ENST00000341255 BCANQ96GW7 911 aa23■■□□□ 1.27
RTL6-201ENST00000341255 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
RTL6-201ENST00000341255 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
RTL6-201ENST00000341255 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
RTL6-201ENST00000341255 ABCC9O60706 1549 aa22.96■■□□□ 1.27
RTL6-201ENST00000341255 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
RTL6-201ENST00000341255 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
RTL6-201ENST00000341255 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
RTL6-201ENST00000341255 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
RTL6-201ENST00000341255 ANP32CO43423 234 aa22.76■■□□□ 1.23
RTL6-201ENST00000341255 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
RTL6-201ENST00000341255 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
RTL6-201ENST00000341255 FBLN2P98095 1184 aa22.59■■□□□ 1.21
RTL6-201ENST00000341255 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
RTL6-201ENST00000341255 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
RTL6-201ENST00000341255 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
RTL6-201ENST00000341255 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
RTL6-201ENST00000341255 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
RTL6-201ENST00000341255 FKBP8Q14318 412 aa22.33■■□□□ 1.16
RTL6-201ENST00000341255 CANXP27824 592 aaKnown RBP22.31■■□□□ 1.16
RTL6-201ENST00000341255 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
RTL6-201ENST00000341255 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
RTL6-201ENST00000341255 NEFMP07197 916 aa22.27■■□□□ 1.16
RTL6-201ENST00000341255 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
RTL6-201ENST00000341255 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
RTL6-201ENST00000341255 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
RTL6-201ENST00000341255 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.14
RTL6-201ENST00000341255 SCRIBQ14160 1630 aa22.14■■□□□ 1.14
RTL6-201ENST00000341255 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
RTL6-201ENST00000341255 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
RTL6-201ENST00000341255 DDX10Q13206 875 aaKnown RBP22.11■■□□□ 1.13
RTL6-201ENST00000341255 EIF5BO60841 1220 aaKnown RBP22.08■■□□□ 1.13
RTL6-201ENST00000341255 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
RTL6-201ENST00000341255 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
RTL6-201ENST00000341255 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
RTL6-201ENST00000341255 MIER1Q8N108 512 aa21.96■■□□□ 1.11
RTL6-201ENST00000341255 NBR1Q14596 966 aa21.94■■□□□ 1.1
RTL6-201ENST00000341255 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
RTL6-201ENST00000341255 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
RTL6-201ENST00000341255 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
RTL6-201ENST00000341255 SALL2Q9Y467 1007 aaPredicted RBP21.9■■□□□ 1.1
RTL6-201ENST00000341255 ANP32BQ92688 251 aaKnown RBP21.89■■□□□ 1.09
RTL6-201ENST00000341255 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
RTL6-201ENST00000341255 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
RTL6-201ENST00000341255 HSP90AA1P07900 732 aaKnown RBP21.86■■□□□ 1.09
RTL6-201ENST00000341255 UPF2Q9HAU5 1272 aaKnown RBP21.85■■□□□ 1.09
RTL6-201ENST00000341255 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
RTL6-201ENST00000341255 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
RTL6-201ENST00000341255 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
RTL6-201ENST00000341255 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
RTL6-201ENST00000341255 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
RTL6-201ENST00000341255 MRS2Q9HD23 443 aa21.78■■□□□ 1.08
RTL6-201ENST00000341255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
RTL6-201ENST00000341255 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
RTL6-201ENST00000341255 CLIP1P30622 1438 aa21.72■■□□□ 1.07
RTL6-201ENST00000341255 GLIPR1L2Q4G1C9 344 aa21.7■■□□□ 1.06
RTL6-201ENST00000341255 ARXQ96QS3 562 aa21.7■■□□□ 1.06
RTL6-201ENST00000341255 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
RTL6-201ENST00000341255 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
RTL6-201ENST00000341255 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
RTL6-201ENST00000341255 WDR43Q15061 677 aaKnown RBP eCLIP21.67■■□□□ 1.06
RTL6-201ENST00000341255 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
RTL6-201ENST00000341255 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms