RNA–Protein interactions for RNA: ENST00000436757.6

PITPNM1-202, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-202ENST00000436757 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
PITPNM1-202ENST00000436757 NISCHQ9Y2I1 1504 aa28.17■■■□□ 2.1
PITPNM1-202ENST00000436757 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
PITPNM1-202ENST00000436757 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
PITPNM1-202ENST00000436757 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
PITPNM1-202ENST00000436757 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.7
PITPNM1-202ENST00000436757 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
PITPNM1-202ENST00000436757 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
PITPNM1-202ENST00000436757 RANGAP1P46060 587 aaPredicted RBP25.07■■□□□ 1.6
PITPNM1-202ENST00000436757 TRIM41Q8WV44 630 aa24.9■■□□□ 1.58
PITPNM1-202ENST00000436757 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
PITPNM1-202ENST00000436757 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
PITPNM1-202ENST00000436757 APLP2Q06481 763 aa24.59■■□□□ 1.53
PITPNM1-202ENST00000436757 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
PITPNM1-202ENST00000436757 HRCP23327 699 aa24.49■■□□□ 1.51
PITPNM1-202ENST00000436757 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
PITPNM1-202ENST00000436757 ABCC9O60706 1549 aa24.42■■□□□ 1.5
PITPNM1-202ENST00000436757 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
PITPNM1-202ENST00000436757 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
PITPNM1-202ENST00000436757 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
PITPNM1-202ENST00000436757 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
PITPNM1-202ENST00000436757 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
PITPNM1-202ENST00000436757 ZEB1P37275 1124 aaPredicted RBP24.07■■□□□ 1.44
PITPNM1-202ENST00000436757 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
PITPNM1-202ENST00000436757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.86■■□□□ 1.41
PITPNM1-202ENST00000436757 ITGAEP38570 1179 aa23.83■■□□□ 1.41
PITPNM1-202ENST00000436757 PELP1Q8IZL8 1130 aaKnown RBP23.69■■□□□ 1.38
PITPNM1-202ENST00000436757 HNRNPUL2Q1KMD3 747 aaKnown RBP23.68■■□□□ 1.38
PITPNM1-202ENST00000436757 DIEXFQ68CQ4 756 aaKnown RBP23.38■■□□□ 1.33
PITPNM1-202ENST00000436757 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
PITPNM1-202ENST00000436757 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
PITPNM1-202ENST00000436757 CNGB1Q14028 1251 aaPredicted RBP23.26■■□□□ 1.31
PITPNM1-202ENST00000436757 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
PITPNM1-202ENST00000436757 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
PITPNM1-202ENST00000436757 P3H3Q8IVL6 736 aa23.15■■□□□ 1.3
PITPNM1-202ENST00000436757 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
PITPNM1-202ENST00000436757 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
PITPNM1-202ENST00000436757 MYT1LQ9UL68 1186 aa23.09■■□□□ 1.29
PITPNM1-202ENST00000436757 FBLN2P98095 1184 aa23.06■■□□□ 1.28
PITPNM1-202ENST00000436757 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
PITPNM1-202ENST00000436757 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
PITPNM1-202ENST00000436757 NEFLP07196 543 aa23.04■■□□□ 1.28
PITPNM1-202ENST00000436757 CSRNP3Q8WYN3 585 aa23.02■■□□□ 1.28
PITPNM1-202ENST00000436757 BCANQ96GW7 911 aa22.91■■□□□ 1.26
PITPNM1-202ENST00000436757 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
PITPNM1-202ENST00000436757 ACIN1Q9UKV3 1341 aaKnown RBP22.85■■□□□ 1.25
PITPNM1-202ENST00000436757 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
PITPNM1-202ENST00000436757 ZNF316A6NFI3 1004 aaPredicted RBP22.76■■□□□ 1.23
PITPNM1-202ENST00000436757 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
PITPNM1-202ENST00000436757 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
PITPNM1-202ENST00000436757 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
PITPNM1-202ENST00000436757 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
PITPNM1-202ENST00000436757 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
PITPNM1-202ENST00000436757 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
PITPNM1-202ENST00000436757 MYT1Q01538 1121 aa22.53■■□□□ 1.2
PITPNM1-202ENST00000436757 ZNF777Q9ULD5 760 aaPredicted RBP22.5■■□□□ 1.19
PITPNM1-202ENST00000436757 SLC4A1APQ9BWU0 796 aaKnown RBP22.44■■□□□ 1.18
PITPNM1-202ENST00000436757 MIER1Q8N108 512 aa22.43■■□□□ 1.18
PITPNM1-202ENST00000436757 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
PITPNM1-202ENST00000436757 CHIC2Q9UKJ5 165 aa22.33■■□□□ 1.17
PITPNM1-202ENST00000436757 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
PITPNM1-202ENST00000436757 DDX10Q13206 875 aaKnown RBP22.27■■□□□ 1.16
PITPNM1-202ENST00000436757 ANP32CO43423 234 aa22.23■■□□□ 1.15
PITPNM1-202ENST00000436757 FKBP8Q14318 412 aa22.19■■□□□ 1.14
PITPNM1-202ENST00000436757 NACADO15069 1562 aa22.17■■□□□ 1.14
PITPNM1-202ENST00000436757 CLIP1P30622 1438 aa22.13■■□□□ 1.13
PITPNM1-202ENST00000436757 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
PITPNM1-202ENST00000436757 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
PITPNM1-202ENST00000436757 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
PITPNM1-202ENST00000436757 SOGA1O94964 1423 aa22.07■■□□□ 1.12
PITPNM1-202ENST00000436757 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
PITPNM1-202ENST00000436757 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
PITPNM1-202ENST00000436757 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
PITPNM1-202ENST00000436757 IRX6P78412 446 aaPredicted RBP22.03■■□□□ 1.12
PITPNM1-202ENST00000436757 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
PITPNM1-202ENST00000436757 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
PITPNM1-202ENST00000436757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.99■■□□□ 1.11
PITPNM1-202ENST00000436757 RRP7BPQ9NSQ0 103 aa21.99■■□□□ 1.11
PITPNM1-202ENST00000436757 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
PITPNM1-202ENST00000436757 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
PITPNM1-202ENST00000436757 HNRNPUQ00839 825 aaKnown RBP eCLIP21.96■■□□□ 1.11
PITPNM1-202ENST00000436757 MTUS2Q5JR59 1369 aa21.94■■□□□ 1.1
PITPNM1-202ENST00000436757 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
PITPNM1-202ENST00000436757 FAM9BQ8IZU0 186 aa21.91■■□□□ 1.1
PITPNM1-202ENST00000436757 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
PITPNM1-202ENST00000436757 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
PITPNM1-202ENST00000436757 CHGAP10645 457 aaKnown RBP21.9■■□□□ 1.1
PITPNM1-202ENST00000436757 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.1
PITPNM1-202ENST00000436757 KDM2AQ9Y2K7 1162 aa21.87■■□□□ 1.09
PITPNM1-202ENST00000436757 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
PITPNM1-202ENST00000436757 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
PITPNM1-202ENST00000436757 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
PITPNM1-202ENST00000436757 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
PITPNM1-202ENST00000436757 GOLGA3Q08378 1498 aa21.84■■□□□ 1.09
PITPNM1-202ENST00000436757 BCL11AQ9H165 835 aa21.82■■□□□ 1.08
PITPNM1-202ENST00000436757 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
PITPNM1-202ENST00000436757 SIN3AQ96ST3 1273 aa21.79■■□□□ 1.08
PITPNM1-202ENST00000436757 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
PITPNM1-202ENST00000436757 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
PITPNM1-202ENST00000436757 WIZO95785 1651 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms