RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
TRIM46-209ENST00000543729 CCDC180Q9P1Z9 1646 aa34.38■■■■□ 3.09
TRIM46-209ENST00000543729 ABCC9O60706 1549 aa34.25■■■■□ 3.07
TRIM46-209ENST00000543729 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
TRIM46-209ENST00000543729 NACADO15069 1562 aa32.49■■■□□ 2.79
TRIM46-209ENST00000543729 DCAF8L2P0C7V8 631 aa32.28■■■□□ 2.76
TRIM46-209ENST00000543729 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
TRIM46-209ENST00000543729 DNAJC5BQ9UF47 199 aa32.01■■■□□ 2.72
TRIM46-209ENST00000543729 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
TRIM46-209ENST00000543729 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
TRIM46-209ENST00000543729 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
TRIM46-209ENST00000543729 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.66
TRIM46-209ENST00000543729 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
TRIM46-209ENST00000543729 SHROOM4Q9ULL8 1493 aa31.36■■■□□ 2.61
TRIM46-209ENST00000543729 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
TRIM46-209ENST00000543729 CC2D2AQ9P2K1 1620 aa30.96■■■□□ 2.55
TRIM46-209ENST00000543729 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
TRIM46-209ENST00000543729 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
TRIM46-209ENST00000543729 NCAPD3P42695 1498 aa29.97■■■□□ 2.39
TRIM46-209ENST00000543729 ATAD2BQ9ULI0 1458 aa29.88■■■□□ 2.37
TRIM46-209ENST00000543729 SMARCA4P51532 1647 aa29.87■■■□□ 2.37
TRIM46-209ENST00000543729 SMARCA2P51531 1590 aa29.83■■■□□ 2.37
TRIM46-209ENST00000543729 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
TRIM46-209ENST00000543729 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
TRIM46-209ENST00000543729 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
TRIM46-209ENST00000543729 ERCC6Q03468 1493 aa29.6■■■□□ 2.33
TRIM46-209ENST00000543729 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
TRIM46-209ENST00000543729 CUX2O14529 1486 aa29.54■■■□□ 2.32
TRIM46-209ENST00000543729 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
TRIM46-209ENST00000543729 NESP48681 1621 aa29.43■■■□□ 2.3
TRIM46-209ENST00000543729 DNAJC5Q9H3Z4 198 aa29.4■■■□□ 2.3
TRIM46-209ENST00000543729 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
TRIM46-209ENST00000543729 WIZO95785 1651 aa29.15■■■□□ 2.26
TRIM46-209ENST00000543729 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
TRIM46-209ENST00000543729 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
TRIM46-209ENST00000543729 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
TRIM46-209ENST00000543729 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
TRIM46-209ENST00000543729 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
TRIM46-209ENST00000543729 MRC2Q9UBG0 1479 aa28.86■■■□□ 2.21
TRIM46-209ENST00000543729 TOP2AP11388 1531 aaKnown RBP28.82■■■□□ 2.2
TRIM46-209ENST00000543729 WDR62O43379 1518 aa28.78■■■□□ 2.2
TRIM46-209ENST00000543729 CEP164Q9UPV0 1460 aa28.76■■■□□ 2.2
TRIM46-209ENST00000543729 CFTRP13569 1480 aa28.74■■■□□ 2.19
TRIM46-209ENST00000543729 FANCD2Q9BXW9 1451 aa28.73■■■□□ 2.19
TRIM46-209ENST00000543729 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
TRIM46-209ENST00000543729 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
TRIM46-209ENST00000543729 URB2Q14146 1524 aaKnown RBP28.47■■■□□ 2.15
TRIM46-209ENST00000543729 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
TRIM46-209ENST00000543729 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
TRIM46-209ENST00000543729 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
TRIM46-209ENST00000543729 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
TRIM46-209ENST00000543729 OSCARQ8IYS5 282 aa28.18■■■□□ 2.1
TRIM46-209ENST00000543729 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
TRIM46-209ENST00000543729 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
TRIM46-209ENST00000543729 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
TRIM46-209ENST00000543729 EIF4G3O43432 1585 aaKnown RBP27.97■■■□□ 2.07
TRIM46-209ENST00000543729 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
TRIM46-209ENST00000543729 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
TRIM46-209ENST00000543729 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.05
TRIM46-209ENST00000543729 RIMBP3CA6NJZ7 1639 aa27.8■■■□□ 2.04
TRIM46-209ENST00000543729 RIMBP3BA6NNM3 1639 aa27.8■■■□□ 2.04
TRIM46-209ENST00000543729 RIMBP3Q9UFD9 1639 aa27.8■■■□□ 2.04
TRIM46-209ENST00000543729 SOGA1O94964 1423 aa27.79■■■□□ 2.04
TRIM46-209ENST00000543729 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
TRIM46-209ENST00000543729 CHD1O14646 1710 aa27.74■■■□□ 2.03
TRIM46-209ENST00000543729 FGD5Q6ZNL6 1462 aa27.74■■■□□ 2.03
TRIM46-209ENST00000543729 CUX1P39880 1505 aa27.72■■■□□ 2.03
TRIM46-209ENST00000543729 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
TRIM46-209ENST00000543729 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
TRIM46-209ENST00000543729 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.03
TRIM46-209ENST00000543729 FBLN2P98095 1184 aa27.67■■■□□ 2.02
TRIM46-209ENST00000543729 SNAPC4Q5SXM2 1469 aa27.59■■■□□ 2.01
TRIM46-209ENST00000543729 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
TRIM46-209ENST00000543729 GRIN2BQ13224 1484 aa27.55■■■□□ 2
TRIM46-209ENST00000543729 CYB5RLQ6IPT4 315 aa27.5■■□□□ 1.99
TRIM46-209ENST00000543729 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
TRIM46-209ENST00000543729 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.99
TRIM46-209ENST00000543729 SYNJ1O43426 1573 aa27.45■■□□□ 1.99
TRIM46-209ENST00000543729 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
TRIM46-209ENST00000543729 SYNJ2O15056 1496 aa27.45■■□□□ 1.98
TRIM46-209ENST00000543729 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
TRIM46-209ENST00000543729 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
TRIM46-209ENST00000543729 CLASP1Q7Z460 1538 aa27.43■■□□□ 1.98
TRIM46-209ENST00000543729 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
TRIM46-209ENST00000543729 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
TRIM46-209ENST00000543729 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
TRIM46-209ENST00000543729 TOP2BQ02880 1626 aa27.32■■□□□ 1.96
TRIM46-209ENST00000543729 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
TRIM46-209ENST00000543729 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
TRIM46-209ENST00000543729 TRHP20396 242 aaPredicted RBP27.18■■□□□ 1.94
TRIM46-209ENST00000543729 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
TRIM46-209ENST00000543729 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
TRIM46-209ENST00000543729 NUP160Q12769 1436 aa27.09■■□□□ 1.93
TRIM46-209ENST00000543729 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
TRIM46-209ENST00000543729 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
TRIM46-209ENST00000543729 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
TRIM46-209ENST00000543729 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
TRIM46-209ENST00000543729 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
TRIM46-209ENST00000543729 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
TRIM46-209ENST00000543729 RUSC2Q8N2Y8 1516 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms