RNA–Protein interactions for RNA: ENST00000242719.3

RNF11-201, Transcript of ring finger protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF11, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-201ENST00000242719 NISCHQ9Y2I1 1504 aa30.07■■■□□ 2.4
RNF11-201ENST00000242719 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
RNF11-201ENST00000242719 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
RNF11-201ENST00000242719 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
RNF11-201ENST00000242719 HRCP23327 699 aa25.85■■□□□ 1.73
RNF11-201ENST00000242719 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
RNF11-201ENST00000242719 PCGF6Q9BYE7 350 aa25.67■■□□□ 1.7
RNF11-201ENST00000242719 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.69
RNF11-201ENST00000242719 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
RNF11-201ENST00000242719 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
RNF11-201ENST00000242719 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
RNF11-201ENST00000242719 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
RNF11-201ENST00000242719 ABCC9O60706 1549 aa25.02■■□□□ 1.6
RNF11-201ENST00000242719 EHMT2Q96KQ7 1210 aa24.9■■□□□ 1.58
RNF11-201ENST00000242719 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
RNF11-201ENST00000242719 DCAF1Q9Y4B6 1507 aa24.69■■□□□ 1.54
RNF11-201ENST00000242719 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
RNF11-201ENST00000242719 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
RNF11-201ENST00000242719 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
RNF11-201ENST00000242719 PELP1Q8IZL8 1130 aaKnown RBP24.41■■□□□ 1.5
RNF11-201ENST00000242719 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
RNF11-201ENST00000242719 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
RNF11-201ENST00000242719 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.46
RNF11-201ENST00000242719 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
RNF11-201ENST00000242719 NACADO15069 1562 aa24.06■■□□□ 1.44
RNF11-201ENST00000242719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
RNF11-201ENST00000242719 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
RNF11-201ENST00000242719 NEUROD1Q13562 356 aa23.89■■□□□ 1.41
RNF11-201ENST00000242719 CCER1Q8TC90 406 aaPredicted RBP23.88■■□□□ 1.41
RNF11-201ENST00000242719 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
RNF11-201ENST00000242719 ACIN1Q9UKV3 1341 aaKnown RBP23.82■■□□□ 1.4
RNF11-201ENST00000242719 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
RNF11-201ENST00000242719 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
RNF11-201ENST00000242719 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
RNF11-201ENST00000242719 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.37
RNF11-201ENST00000242719 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.36
RNF11-201ENST00000242719 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
RNF11-201ENST00000242719 WIZO95785 1651 aa23.49■■□□□ 1.35
RNF11-201ENST00000242719 YTHDC1Q96MU7 727 aaKnown RBP23.46■■□□□ 1.35
RNF11-201ENST00000242719 BICRAQ9NZM4 1560 aa23.43■■□□□ 1.34
RNF11-201ENST00000242719 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
RNF11-201ENST00000242719 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
RNF11-201ENST00000242719 RANGAP1P46060 587 aaPredicted RBP23.31■■□□□ 1.32
RNF11-201ENST00000242719 MYT1Q01538 1121 aa23.28■■□□□ 1.32
RNF11-201ENST00000242719 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.31
RNF11-201ENST00000242719 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
RNF11-201ENST00000242719 SOGA1O94964 1423 aa23.21■■□□□ 1.31
RNF11-201ENST00000242719 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
RNF11-201ENST00000242719 ZNF316A6NFI3 1004 aaPredicted RBP23.11■■□□□ 1.29
RNF11-201ENST00000242719 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
RNF11-201ENST00000242719 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
RNF11-201ENST00000242719 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
RNF11-201ENST00000242719 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
RNF11-201ENST00000242719 MIER1Q8N108 512 aa23.05■■□□□ 1.28
RNF11-201ENST00000242719 TNIKQ9UKE5 1360 aa22.95■■□□□ 1.26
RNF11-201ENST00000242719 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
RNF11-201ENST00000242719 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
RNF11-201ENST00000242719 APLP2Q06481 763 aa22.89■■□□□ 1.25
RNF11-201ENST00000242719 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
RNF11-201ENST00000242719 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
RNF11-201ENST00000242719 GOLGA3Q08378 1498 aa22.77■■□□□ 1.24
RNF11-201ENST00000242719 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
RNF11-201ENST00000242719 CLIP1P30622 1438 aa22.7■■□□□ 1.22
RNF11-201ENST00000242719 EEA1Q15075 1411 aa22.65■■□□□ 1.22
RNF11-201ENST00000242719 ITGAEP38570 1179 aa22.65■■□□□ 1.22
RNF11-201ENST00000242719 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
RNF11-201ENST00000242719 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
RNF11-201ENST00000242719 CEP164Q9UPV0 1460 aa22.55■■□□□ 1.2
RNF11-201ENST00000242719 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
RNF11-201ENST00000242719 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
RNF11-201ENST00000242719 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
RNF11-201ENST00000242719 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
RNF11-201ENST00000242719 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
RNF11-201ENST00000242719 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
RNF11-201ENST00000242719 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
RNF11-201ENST00000242719 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.17
RNF11-201ENST00000242719 BCANQ96GW7 911 aa22.37■■□□□ 1.17
RNF11-201ENST00000242719 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
RNF11-201ENST00000242719 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
RNF11-201ENST00000242719 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
RNF11-201ENST00000242719 KIF21BO75037 1637 aa22.32■■□□□ 1.16
RNF11-201ENST00000242719 ANP32EQ9BTT0 268 aa22.31■■□□□ 1.16
RNF11-201ENST00000242719 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
RNF11-201ENST00000242719 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
RNF11-201ENST00000242719 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
RNF11-201ENST00000242719 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
RNF11-201ENST00000242719 CLSPNQ9HAW4 1339 aa22.18■■□□□ 1.14
RNF11-201ENST00000242719 DDX10Q13206 875 aaKnown RBP22.15■■□□□ 1.14
RNF11-201ENST00000242719 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
RNF11-201ENST00000242719 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
RNF11-201ENST00000242719 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
RNF11-201ENST00000242719 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
RNF11-201ENST00000242719 FKBP8Q14318 412 aa22.1■■□□□ 1.13
RNF11-201ENST00000242719 NESP48681 1621 aa22.06■■□□□ 1.12
RNF11-201ENST00000242719 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
RNF11-201ENST00000242719 TRIM52Q96A61 297 aa22.02■■□□□ 1.12
RNF11-201ENST00000242719 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
RNF11-201ENST00000242719 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
RNF11-201ENST00000242719 CFTRP13569 1480 aa21.97■■□□□ 1.11
RNF11-201ENST00000242719 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms