RNA–Protein interactions for RNA: ENST00000329168.3

MEOX1-202, Transcript of mesenchyme homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene MEOX1, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEOX1-202ENST00000329168 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
MEOX1-202ENST00000329168 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
MEOX1-202ENST00000329168 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
MEOX1-202ENST00000329168 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
MEOX1-202ENST00000329168 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
MEOX1-202ENST00000329168 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
MEOX1-202ENST00000329168 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
MEOX1-202ENST00000329168 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
MEOX1-202ENST00000329168 ABCC9O60706 1549 aa26.25■■□□□ 1.79
MEOX1-202ENST00000329168 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
MEOX1-202ENST00000329168 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
MEOX1-202ENST00000329168 NACADO15069 1562 aa26.09■■□□□ 1.77
MEOX1-202ENST00000329168 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
MEOX1-202ENST00000329168 RB1CC1Q8TDY2 1594 aa25.71■■□□□ 1.71
MEOX1-202ENST00000329168 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
MEOX1-202ENST00000329168 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
MEOX1-202ENST00000329168 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
MEOX1-202ENST00000329168 WIZO95785 1651 aa25.32■■□□□ 1.64
MEOX1-202ENST00000329168 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
MEOX1-202ENST00000329168 BAZ1AQ9NRL2 1556 aaPredicted RBP25.28■■□□□ 1.64
MEOX1-202ENST00000329168 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
MEOX1-202ENST00000329168 SMARCA4P51532 1647 aa25.07■■□□□ 1.6
MEOX1-202ENST00000329168 PABPN1Q86U42 306 aaKnown RBP eCLIP25.06■■□□□ 1.6
MEOX1-202ENST00000329168 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
MEOX1-202ENST00000329168 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
MEOX1-202ENST00000329168 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
MEOX1-202ENST00000329168 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
MEOX1-202ENST00000329168 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
MEOX1-202ENST00000329168 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
MEOX1-202ENST00000329168 HRCP23327 699 aa24.82■■□□□ 1.56
MEOX1-202ENST00000329168 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
MEOX1-202ENST00000329168 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
MEOX1-202ENST00000329168 TRIM26Q12899 539 aaPredicted RBP24.69■■□□□ 1.54
MEOX1-202ENST00000329168 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
MEOX1-202ENST00000329168 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
MEOX1-202ENST00000329168 ATAD2BQ9ULI0 1458 aa24.54■■□□□ 1.52
MEOX1-202ENST00000329168 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
MEOX1-202ENST00000329168 SOGA1O94964 1423 aa24.38■■□□□ 1.49
MEOX1-202ENST00000329168 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
MEOX1-202ENST00000329168 EEA1Q15075 1411 aa24.29■■□□□ 1.48
MEOX1-202ENST00000329168 PPARGC1BQ86YN6 1023 aaKnown RBP24.28■■□□□ 1.48
MEOX1-202ENST00000329168 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
MEOX1-202ENST00000329168 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
MEOX1-202ENST00000329168 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
MEOX1-202ENST00000329168 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
MEOX1-202ENST00000329168 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
MEOX1-202ENST00000329168 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
MEOX1-202ENST00000329168 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
MEOX1-202ENST00000329168 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
MEOX1-202ENST00000329168 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
MEOX1-202ENST00000329168 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
MEOX1-202ENST00000329168 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
MEOX1-202ENST00000329168 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
MEOX1-202ENST00000329168 KIF21BO75037 1637 aa23.9■■□□□ 1.42
MEOX1-202ENST00000329168 CFTRP13569 1480 aa23.86■■□□□ 1.41
MEOX1-202ENST00000329168 TTBK1Q5TCY1 1321 aaPredicted RBP23.85■■□□□ 1.41
MEOX1-202ENST00000329168 BIVM-ERCC5R4GMW8 1640 aa23.85■■□□□ 1.41
MEOX1-202ENST00000329168 RAPGEF2Q9Y4G8 1499 aa23.8■■□□□ 1.4
MEOX1-202ENST00000329168 CLIP1P30622 1438 aa23.77■■□□□ 1.4
MEOX1-202ENST00000329168 CUX1P39880 1505 aa23.77■■□□□ 1.4
MEOX1-202ENST00000329168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.71■■□□□ 1.39
MEOX1-202ENST00000329168 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
MEOX1-202ENST00000329168 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
MEOX1-202ENST00000329168 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
MEOX1-202ENST00000329168 PRXQ9BXM0 1461 aa23.65■■□□□ 1.38
MEOX1-202ENST00000329168 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
MEOX1-202ENST00000329168 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
MEOX1-202ENST00000329168 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
MEOX1-202ENST00000329168 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
MEOX1-202ENST00000329168 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
MEOX1-202ENST00000329168 APLP2Q06481 763 aa23.56■■□□□ 1.36
MEOX1-202ENST00000329168 CUX2O14529 1486 aa23.44■■□□□ 1.34
MEOX1-202ENST00000329168 IGF1RP08069 1367 aa23.41■■□□□ 1.34
MEOX1-202ENST00000329168 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
MEOX1-202ENST00000329168 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
MEOX1-202ENST00000329168 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
MEOX1-202ENST00000329168 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
MEOX1-202ENST00000329168 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
MEOX1-202ENST00000329168 NESP48681 1621 aa23.28■■□□□ 1.32
MEOX1-202ENST00000329168 ARHGAP35Q9NRY4 1499 aa23.26■■□□□ 1.31
MEOX1-202ENST00000329168 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
MEOX1-202ENST00000329168 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
MEOX1-202ENST00000329168 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
MEOX1-202ENST00000329168 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
MEOX1-202ENST00000329168 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
MEOX1-202ENST00000329168 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
MEOX1-202ENST00000329168 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
MEOX1-202ENST00000329168 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
MEOX1-202ENST00000329168 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
MEOX1-202ENST00000329168 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
MEOX1-202ENST00000329168 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
MEOX1-202ENST00000329168 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
MEOX1-202ENST00000329168 P3H3Q8IVL6 736 aa23■■□□□ 1.27
MEOX1-202ENST00000329168 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
MEOX1-202ENST00000329168 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
MEOX1-202ENST00000329168 FHAD1B1AJZ9 1412 aa22.96■■□□□ 1.27
MEOX1-202ENST00000329168 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
MEOX1-202ENST00000329168 CUL7Q14999 1698 aa22.95■■□□□ 1.27
MEOX1-202ENST00000329168 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
MEOX1-202ENST00000329168 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms