RNA–Protein interactions for RNA: ENST00000541323.1

PDGFRL-203, Transcript of platelet derived growth factor receptor like, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDGFRL, Length 1,905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRL-203ENST00000541323 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
PDGFRL-203ENST00000541323 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
PDGFRL-203ENST00000541323 ZCCHC6Q5VYS8 1495 aaKnown RBP29.72■■■□□ 2.35
PDGFRL-203ENST00000541323 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
PDGFRL-203ENST00000541323 DCAF8L2P0C7V8 631 aa29.22■■■□□ 2.27
PDGFRL-203ENST00000541323 ABCC9O60706 1549 aa29.09■■■□□ 2.25
PDGFRL-203ENST00000541323 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
PDGFRL-203ENST00000541323 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
PDGFRL-203ENST00000541323 NACADO15069 1562 aa28.69■■■□□ 2.18
PDGFRL-203ENST00000541323 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
PDGFRL-203ENST00000541323 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
PDGFRL-203ENST00000541323 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
PDGFRL-203ENST00000541323 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
PDGFRL-203ENST00000541323 BICRAQ9NZM4 1560 aa27.56■■■□□ 2
PDGFRL-203ENST00000541323 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
PDGFRL-203ENST00000541323 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
PDGFRL-203ENST00000541323 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
PDGFRL-203ENST00000541323 MROH2BQ7Z745 1585 aa27.32■■□□□ 1.96
PDGFRL-203ENST00000541323 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
PDGFRL-203ENST00000541323 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
PDGFRL-203ENST00000541323 WIZO95785 1651 aa27.13■■□□□ 1.93
PDGFRL-203ENST00000541323 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
PDGFRL-203ENST00000541323 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.89
PDGFRL-203ENST00000541323 EIF4G1Q04637 1599 aaKnown RBP26.74■■□□□ 1.87
PDGFRL-203ENST00000541323 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
PDGFRL-203ENST00000541323 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
PDGFRL-203ENST00000541323 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
PDGFRL-203ENST00000541323 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
PDGFRL-203ENST00000541323 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
PDGFRL-203ENST00000541323 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
PDGFRL-203ENST00000541323 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
PDGFRL-203ENST00000541323 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
PDGFRL-203ENST00000541323 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
PDGFRL-203ENST00000541323 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
PDGFRL-203ENST00000541323 CFTRP13569 1480 aa25.9■■□□□ 1.74
PDGFRL-203ENST00000541323 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
PDGFRL-203ENST00000541323 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
PDGFRL-203ENST00000541323 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
PDGFRL-203ENST00000541323 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
PDGFRL-203ENST00000541323 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
PDGFRL-203ENST00000541323 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
PDGFRL-203ENST00000541323 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
PDGFRL-203ENST00000541323 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
PDGFRL-203ENST00000541323 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
PDGFRL-203ENST00000541323 LAMC3Q9Y6N6 1575 aa25.58■■□□□ 1.68
PDGFRL-203ENST00000541323 NESP48681 1621 aa25.56■■□□□ 1.68
PDGFRL-203ENST00000541323 CUX1P39880 1505 aa25.55■■□□□ 1.68
PDGFRL-203ENST00000541323 SOGA1O94964 1423 aa25.54■■□□□ 1.68
PDGFRL-203ENST00000541323 EEA1Q15075 1411 aa25.52■■□□□ 1.68
PDGFRL-203ENST00000541323 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
PDGFRL-203ENST00000541323 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
PDGFRL-203ENST00000541323 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
PDGFRL-203ENST00000541323 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
PDGFRL-203ENST00000541323 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
PDGFRL-203ENST00000541323 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
PDGFRL-203ENST00000541323 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
PDGFRL-203ENST00000541323 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
PDGFRL-203ENST00000541323 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
PDGFRL-203ENST00000541323 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
PDGFRL-203ENST00000541323 KIF21BO75037 1637 aa25.2■■□□□ 1.62
PDGFRL-203ENST00000541323 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
PDGFRL-203ENST00000541323 URB2Q14146 1524 aaKnown RBP25.19■■□□□ 1.62
PDGFRL-203ENST00000541323 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
PDGFRL-203ENST00000541323 POLA1P09884 1462 aaPredicted RBP25.13■■□□□ 1.61
PDGFRL-203ENST00000541323 CUX2O14529 1486 aa25.12■■□□□ 1.61
PDGFRL-203ENST00000541323 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
PDGFRL-203ENST00000541323 UBTFP17480 764 aaKnown RBP25.08■■□□□ 1.61
PDGFRL-203ENST00000541323 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
PDGFRL-203ENST00000541323 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
PDGFRL-203ENST00000541323 ABCA10Q8WWZ4 1543 aa25.04■■□□□ 1.6
PDGFRL-203ENST00000541323 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
PDGFRL-203ENST00000541323 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
PDGFRL-203ENST00000541323 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
PDGFRL-203ENST00000541323 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
PDGFRL-203ENST00000541323 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
PDGFRL-203ENST00000541323 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
PDGFRL-203ENST00000541323 IGF1RP08069 1367 aa24.94■■□□□ 1.58
PDGFRL-203ENST00000541323 WDR62O43379 1518 aa24.91■■□□□ 1.58
PDGFRL-203ENST00000541323 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
PDGFRL-203ENST00000541323 ABCA5Q8WWZ7 1642 aa24.84■■□□□ 1.57
PDGFRL-203ENST00000541323 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
PDGFRL-203ENST00000541323 THOC2Q8NI27 1593 aaKnown RBP24.82■■□□□ 1.56
PDGFRL-203ENST00000541323 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
PDGFRL-203ENST00000541323 CUL7Q14999 1698 aa24.8■■□□□ 1.56
PDGFRL-203ENST00000541323 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
PDGFRL-203ENST00000541323 CLIP1P30622 1438 aa24.78■■□□□ 1.56
PDGFRL-203ENST00000541323 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
PDGFRL-203ENST00000541323 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
PDGFRL-203ENST00000541323 RANGAP1P46060 587 aaPredicted RBP24.67■■□□□ 1.54
PDGFRL-203ENST00000541323 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.53
PDGFRL-203ENST00000541323 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
PDGFRL-203ENST00000541323 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
PDGFRL-203ENST00000541323 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
PDGFRL-203ENST00000541323 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
PDGFRL-203ENST00000541323 CTTNBP2Q8WZ74 1663 aa24.55■■□□□ 1.52
PDGFRL-203ENST00000541323 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
PDGFRL-203ENST00000541323 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
PDGFRL-203ENST00000541323 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
PDGFRL-203ENST00000541323 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
PDGFRL-203ENST00000541323 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms