RNA–Protein interactions for RNA: ENST00000441248.5

CXorf40A-209, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 2,411 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-209ENST00000441248 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
CXorf40A-209ENST00000441248 HRCP23327 699 aa26.72■■□□□ 1.87
CXorf40A-209ENST00000441248 PELP1Q8IZL8 1130 aaKnown RBP26.35■■□□□ 1.81
CXorf40A-209ENST00000441248 PPARGC1BQ86YN6 1023 aaKnown RBP26.09■■□□□ 1.77
CXorf40A-209ENST00000441248 PCGF6Q9BYE7 350 aa25.88■■□□□ 1.73
CXorf40A-209ENST00000441248 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
CXorf40A-209ENST00000441248 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
CXorf40A-209ENST00000441248 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
CXorf40A-209ENST00000441248 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
CXorf40A-209ENST00000441248 MYT1Q01538 1121 aa25.44■■□□□ 1.66
CXorf40A-209ENST00000441248 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
CXorf40A-209ENST00000441248 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
CXorf40A-209ENST00000441248 DCAF1Q9Y4B6 1507 aa25.24■■□□□ 1.63
CXorf40A-209ENST00000441248 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
CXorf40A-209ENST00000441248 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
CXorf40A-209ENST00000441248 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
CXorf40A-209ENST00000441248 ZEB1P37275 1124 aaPredicted RBP24.94■■□□□ 1.58
CXorf40A-209ENST00000441248 ABCC9O60706 1549 aa24.81■■□□□ 1.56
CXorf40A-209ENST00000441248 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
CXorf40A-209ENST00000441248 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
CXorf40A-209ENST00000441248 NEUROD1Q13562 356 aa24.63■■□□□ 1.53
CXorf40A-209ENST00000441248 GTF3C3Q9Y5Q9 886 aa24.51■■□□□ 1.51
CXorf40A-209ENST00000441248 CENPBP07199 599 aaPredicted RBP24.3■■□□□ 1.48
CXorf40A-209ENST00000441248 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
CXorf40A-209ENST00000441248 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
CXorf40A-209ENST00000441248 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
CXorf40A-209ENST00000441248 NACADO15069 1562 aa23.98■■□□□ 1.43
CXorf40A-209ENST00000441248 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
CXorf40A-209ENST00000441248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
CXorf40A-209ENST00000441248 CCER1Q8TC90 406 aaPredicted RBP23.8■■□□□ 1.4
CXorf40A-209ENST00000441248 BCL11AQ9H165 835 aa23.75■■□□□ 1.39
CXorf40A-209ENST00000441248 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
CXorf40A-209ENST00000441248 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
CXorf40A-209ENST00000441248 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
CXorf40A-209ENST00000441248 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
CXorf40A-209ENST00000441248 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
CXorf40A-209ENST00000441248 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
CXorf40A-209ENST00000441248 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
CXorf40A-209ENST00000441248 MIER1Q8N108 512 aa23.42■■□□□ 1.34
CXorf40A-209ENST00000441248 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
CXorf40A-209ENST00000441248 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.33
CXorf40A-209ENST00000441248 TSHZ2Q9NRE2 1034 aa23.3■■□□□ 1.32
CXorf40A-209ENST00000441248 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
CXorf40A-209ENST00000441248 SUPT16HQ9Y5B9 1047 aaKnown RBP23.28■■□□□ 1.32
CXorf40A-209ENST00000441248 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
CXorf40A-209ENST00000441248 CLSPNQ9HAW4 1339 aa23.23■■□□□ 1.31
CXorf40A-209ENST00000441248 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
CXorf40A-209ENST00000441248 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
CXorf40A-209ENST00000441248 WIZO95785 1651 aa23.11■■□□□ 1.29
CXorf40A-209ENST00000441248 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
CXorf40A-209ENST00000441248 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
CXorf40A-209ENST00000441248 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
CXorf40A-209ENST00000441248 SMARCA4P51532 1647 aa22.83■■□□□ 1.24
CXorf40A-209ENST00000441248 CEP162Q5TB80 1403 aa22.72■■□□□ 1.23
CXorf40A-209ENST00000441248 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
CXorf40A-209ENST00000441248 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
CXorf40A-209ENST00000441248 BCANQ96GW7 911 aa22.62■■□□□ 1.21
CXorf40A-209ENST00000441248 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
CXorf40A-209ENST00000441248 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
CXorf40A-209ENST00000441248 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
CXorf40A-209ENST00000441248 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
CXorf40A-209ENST00000441248 MSH5O43196 834 aa22.57■■□□□ 1.2
CXorf40A-209ENST00000441248 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
CXorf40A-209ENST00000441248 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
CXorf40A-209ENST00000441248 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
CXorf40A-209ENST00000441248 FKBP8Q14318 412 aa22.52■■□□□ 1.2
CXorf40A-209ENST00000441248 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
CXorf40A-209ENST00000441248 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
CXorf40A-209ENST00000441248 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
CXorf40A-209ENST00000441248 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
CXorf40A-209ENST00000441248 FANCIQ9NVI1 1328 aa22.33■■□□□ 1.17
CXorf40A-209ENST00000441248 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
CXorf40A-209ENST00000441248 APLP2Q06481 763 aa22.31■■□□□ 1.16
CXorf40A-209ENST00000441248 ITGAEP38570 1179 aa22.31■■□□□ 1.16
CXorf40A-209ENST00000441248 SOGA1O94964 1423 aa22.29■■□□□ 1.16
CXorf40A-209ENST00000441248 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
CXorf40A-209ENST00000441248 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
CXorf40A-209ENST00000441248 UBTFP17480 764 aaKnown RBP22.28■■□□□ 1.16
CXorf40A-209ENST00000441248 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
CXorf40A-209ENST00000441248 NEFLP07196 543 aa22.26■■□□□ 1.15
CXorf40A-209ENST00000441248 ANO8Q9HCE9 1232 aaPredicted RBP22.23■■□□□ 1.15
CXorf40A-209ENST00000441248 DEKP35659 375 aaKnown RBP22.23■■□□□ 1.15
CXorf40A-209ENST00000441248 EEA1Q15075 1411 aa22.19■■□□□ 1.14
CXorf40A-209ENST00000441248 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
CXorf40A-209ENST00000441248 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
CXorf40A-209ENST00000441248 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
CXorf40A-209ENST00000441248 CLIP1P30622 1438 aa22.07■■□□□ 1.12
CXorf40A-209ENST00000441248 VPS8Q8N3P4 1428 aa22.06■■□□□ 1.12
CXorf40A-209ENST00000441248 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
CXorf40A-209ENST00000441248 CDK11AQ9UQ88 783 aaPredicted RBP22.03■■□□□ 1.12
CXorf40A-209ENST00000441248 SYNJ1O43426 1573 aa22■■□□□ 1.11
CXorf40A-209ENST00000441248 TRIM52Q96A61 297 aa22■■□□□ 1.11
CXorf40A-209ENST00000441248 SALL2Q9Y467 1007 aaPredicted RBP22■■□□□ 1.11
CXorf40A-209ENST00000441248 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
CXorf40A-209ENST00000441248 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
CXorf40A-209ENST00000441248 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
CXorf40A-209ENST00000441248 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
CXorf40A-209ENST00000441248 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.1
CXorf40A-209ENST00000441248 KIF21BO75037 1637 aa21.87■■□□□ 1.09
CXorf40A-209ENST00000441248 CUX2O14529 1486 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 356.8 ms