RNA–Protein interactions for RNA: ENST00000420015.6

PARN-202, Transcript of poly(A)-specific ribonuclease, humanhuman

TSL 2 BASIC

Gene PARN, Length 2,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARN-202ENST00000420015 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.92
PARN-202ENST00000420015 CCDC180Q9P1Z9 1646 aa28.68■■■□□ 2.18
PARN-202ENST00000420015 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
PARN-202ENST00000420015 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
PARN-202ENST00000420015 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
PARN-202ENST00000420015 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
PARN-202ENST00000420015 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
PARN-202ENST00000420015 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
PARN-202ENST00000420015 NACADO15069 1562 aa26.56■■□□□ 1.84
PARN-202ENST00000420015 ABCC9O60706 1549 aa26.53■■□□□ 1.84
PARN-202ENST00000420015 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
PARN-202ENST00000420015 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
PARN-202ENST00000420015 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
PARN-202ENST00000420015 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
PARN-202ENST00000420015 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
PARN-202ENST00000420015 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
PARN-202ENST00000420015 BAZ1AQ9NRL2 1556 aaPredicted RBP25.67■■□□□ 1.7
PARN-202ENST00000420015 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.69
PARN-202ENST00000420015 WIZO95785 1651 aa25.59■■□□□ 1.69
PARN-202ENST00000420015 SMARCA4P51532 1647 aa25.45■■□□□ 1.67
PARN-202ENST00000420015 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
PARN-202ENST00000420015 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
PARN-202ENST00000420015 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
PARN-202ENST00000420015 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
PARN-202ENST00000420015 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
PARN-202ENST00000420015 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
PARN-202ENST00000420015 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
PARN-202ENST00000420015 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
PARN-202ENST00000420015 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
PARN-202ENST00000420015 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
PARN-202ENST00000420015 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
PARN-202ENST00000420015 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
PARN-202ENST00000420015 ABCC8Q09428 1581 aa24.82■■□□□ 1.56
PARN-202ENST00000420015 HRCP23327 699 aa24.79■■□□□ 1.56
PARN-202ENST00000420015 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
PARN-202ENST00000420015 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
PARN-202ENST00000420015 EEA1Q15075 1411 aa24.63■■□□□ 1.53
PARN-202ENST00000420015 WRNQ14191 1432 aaPredicted RBP eCLIP24.59■■□□□ 1.53
PARN-202ENST00000420015 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
PARN-202ENST00000420015 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
PARN-202ENST00000420015 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
PARN-202ENST00000420015 SOGA1O94964 1423 aa24.52■■□□□ 1.52
PARN-202ENST00000420015 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
PARN-202ENST00000420015 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
PARN-202ENST00000420015 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
PARN-202ENST00000420015 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
PARN-202ENST00000420015 GOLGA3Q08378 1498 aa24.32■■□□□ 1.48
PARN-202ENST00000420015 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
PARN-202ENST00000420015 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
PARN-202ENST00000420015 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
PARN-202ENST00000420015 KIF21BO75037 1637 aa24.24■■□□□ 1.47
PARN-202ENST00000420015 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
PARN-202ENST00000420015 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
PARN-202ENST00000420015 CFTRP13569 1480 aa24.19■■□□□ 1.46
PARN-202ENST00000420015 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.46
PARN-202ENST00000420015 PPARGC1BQ86YN6 1023 aaKnown RBP24.09■■□□□ 1.45
PARN-202ENST00000420015 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
PARN-202ENST00000420015 CUX1P39880 1505 aa24.05■■□□□ 1.44
PARN-202ENST00000420015 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
PARN-202ENST00000420015 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
PARN-202ENST00000420015 CADPSQ9ULU8 1353 aa23.96■■□□□ 1.43
PARN-202ENST00000420015 CLIP1P30622 1438 aa23.96■■□□□ 1.43
PARN-202ENST00000420015 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
PARN-202ENST00000420015 PRXQ9BXM0 1461 aa23.92■■□□□ 1.42
PARN-202ENST00000420015 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
PARN-202ENST00000420015 VPS8Q8N3P4 1428 aa23.85■■□□□ 1.41
PARN-202ENST00000420015 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
PARN-202ENST00000420015 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.39
PARN-202ENST00000420015 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
PARN-202ENST00000420015 CUX2O14529 1486 aa23.68■■□□□ 1.38
PARN-202ENST00000420015 APLP2Q06481 763 aa23.66■■□□□ 1.38
PARN-202ENST00000420015 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.38
PARN-202ENST00000420015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
PARN-202ENST00000420015 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
PARN-202ENST00000420015 IGF1RP08069 1367 aa23.62■■□□□ 1.37
PARN-202ENST00000420015 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
PARN-202ENST00000420015 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
PARN-202ENST00000420015 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
PARN-202ENST00000420015 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
PARN-202ENST00000420015 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
PARN-202ENST00000420015 NESP48681 1621 aa23.51■■□□□ 1.35
PARN-202ENST00000420015 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
PARN-202ENST00000420015 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
PARN-202ENST00000420015 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
PARN-202ENST00000420015 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
PARN-202ENST00000420015 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
PARN-202ENST00000420015 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
PARN-202ENST00000420015 CUL7Q14999 1698 aa23.35■■□□□ 1.33
PARN-202ENST00000420015 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
PARN-202ENST00000420015 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
PARN-202ENST00000420015 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
PARN-202ENST00000420015 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
PARN-202ENST00000420015 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
PARN-202ENST00000420015 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
PARN-202ENST00000420015 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
PARN-202ENST00000420015 EFCAB5A4FU69 1503 aa23.21■■□□□ 1.31
PARN-202ENST00000420015 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
PARN-202ENST00000420015 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
PARN-202ENST00000420015 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
PARN-202ENST00000420015 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms