RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
ZNF563-201ENST00000293725 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.77
ZNF563-201ENST00000293725 HRCP23327 699 aa26.13■■□□□ 1.77
ZNF563-201ENST00000293725 SUPT5HO00267 1087 aaKnown RBP26■■□□□ 1.75
ZNF563-201ENST00000293725 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
ZNF563-201ENST00000293725 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
ZNF563-201ENST00000293725 PPARGC1BQ86YN6 1023 aaKnown RBP25.63■■□□□ 1.69
ZNF563-201ENST00000293725 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
ZNF563-201ENST00000293725 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
ZNF563-201ENST00000293725 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.6
ZNF563-201ENST00000293725 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
ZNF563-201ENST00000293725 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
ZNF563-201ENST00000293725 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
ZNF563-201ENST00000293725 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
ZNF563-201ENST00000293725 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
ZNF563-201ENST00000293725 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
ZNF563-201ENST00000293725 ZEB1P37275 1124 aaPredicted RBP24.62■■□□□ 1.53
ZNF563-201ENST00000293725 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
ZNF563-201ENST00000293725 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
ZNF563-201ENST00000293725 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
ZNF563-201ENST00000293725 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
ZNF563-201ENST00000293725 MYT1Q01538 1121 aa23.99■■□□□ 1.43
ZNF563-201ENST00000293725 EHMT2Q96KQ7 1210 aa23.97■■□□□ 1.43
ZNF563-201ENST00000293725 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
ZNF563-201ENST00000293725 ABCC9O60706 1549 aa23.86■■□□□ 1.41
ZNF563-201ENST00000293725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
ZNF563-201ENST00000293725 CENPBP07199 599 aaPredicted RBP23.83■■□□□ 1.4
ZNF563-201ENST00000293725 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
ZNF563-201ENST00000293725 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
ZNF563-201ENST00000293725 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
ZNF563-201ENST00000293725 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
ZNF563-201ENST00000293725 SCRIBQ14160 1630 aa23.45■■□□□ 1.34
ZNF563-201ENST00000293725 YTHDC1Q96MU7 727 aaKnown RBP23.41■■□□□ 1.34
ZNF563-201ENST00000293725 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
ZNF563-201ENST00000293725 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
ZNF563-201ENST00000293725 MIER1Q8N108 512 aa23.17■■□□□ 1.3
ZNF563-201ENST00000293725 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
ZNF563-201ENST00000293725 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
ZNF563-201ENST00000293725 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
ZNF563-201ENST00000293725 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
ZNF563-201ENST00000293725 WIZO95785 1651 aa23.01■■□□□ 1.27
ZNF563-201ENST00000293725 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
ZNF563-201ENST00000293725 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
ZNF563-201ENST00000293725 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
ZNF563-201ENST00000293725 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
ZNF563-201ENST00000293725 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
ZNF563-201ENST00000293725 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
ZNF563-201ENST00000293725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.24
ZNF563-201ENST00000293725 SOGA1O94964 1423 aa22.82■■□□□ 1.24
ZNF563-201ENST00000293725 SUPT16HQ9Y5B9 1047 aaKnown RBP22.78■■□□□ 1.24
ZNF563-201ENST00000293725 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
ZNF563-201ENST00000293725 CLSPNQ9HAW4 1339 aa22.71■■□□□ 1.23
ZNF563-201ENST00000293725 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
ZNF563-201ENST00000293725 TSHZ2Q9NRE2 1034 aa22.65■■□□□ 1.22
ZNF563-201ENST00000293725 ANP32EQ9BTT0 268 aa22.64■■□□□ 1.22
ZNF563-201ENST00000293725 EEA1Q15075 1411 aa22.63■■□□□ 1.21
ZNF563-201ENST00000293725 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
ZNF563-201ENST00000293725 NACADO15069 1562 aa22.61■■□□□ 1.21
ZNF563-201ENST00000293725 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
ZNF563-201ENST00000293725 BCL11AQ9H165 835 aa22.52■■□□□ 1.2
ZNF563-201ENST00000293725 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
ZNF563-201ENST00000293725 APLP2Q06481 763 aa22.47■■□□□ 1.19
ZNF563-201ENST00000293725 CLIP1P30622 1438 aa22.45■■□□□ 1.18
ZNF563-201ENST00000293725 VPS8Q8N3P4 1428 aa22.41■■□□□ 1.18
ZNF563-201ENST00000293725 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
ZNF563-201ENST00000293725 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
ZNF563-201ENST00000293725 BCANQ96GW7 911 aa22.36■■□□□ 1.17
ZNF563-201ENST00000293725 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
ZNF563-201ENST00000293725 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
ZNF563-201ENST00000293725 KIF21BO75037 1637 aa22.3■■□□□ 1.16
ZNF563-201ENST00000293725 KCNH8Q96L42 1107 aa22.28■■□□□ 1.16
ZNF563-201ENST00000293725 FKBP8Q14318 412 aa22.23■■□□□ 1.15
ZNF563-201ENST00000293725 RAPGEF2Q9Y4G8 1499 aa22.19■■□□□ 1.14
ZNF563-201ENST00000293725 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
ZNF563-201ENST00000293725 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
ZNF563-201ENST00000293725 RBM19Q9Y4C8 960 aaKnown RBP22.13■■□□□ 1.13
ZNF563-201ENST00000293725 KANK4Q5T7N3 995 aaPredicted RBP22.08■■□□□ 1.12
ZNF563-201ENST00000293725 NEFLP07196 543 aa22.05■■□□□ 1.12
ZNF563-201ENST00000293725 ITGAEP38570 1179 aa22.01■■□□□ 1.11
ZNF563-201ENST00000293725 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
ZNF563-201ENST00000293725 RRBP1Q9P2E9 1410 aaKnown RBP21.98■■□□□ 1.11
ZNF563-201ENST00000293725 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
ZNF563-201ENST00000293725 CUX2O14529 1486 aa21.94■■□□□ 1.1
ZNF563-201ENST00000293725 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
ZNF563-201ENST00000293725 MSH5O43196 834 aa21.92■■□□□ 1.1
ZNF563-201ENST00000293725 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
ZNF563-201ENST00000293725 RAB3GAP2Q9H2M9 1393 aa21.86■■□□□ 1.09
ZNF563-201ENST00000293725 MAPKBP1O60336 1514 aa21.86■■□□□ 1.09
ZNF563-201ENST00000293725 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
ZNF563-201ENST00000293725 UNC13AQ9UPW8 1703 aa21.82■■□□□ 1.08
ZNF563-201ENST00000293725 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
ZNF563-201ENST00000293725 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
ZNF563-201ENST00000293725 SIN3AQ96ST3 1273 aa21.79■■□□□ 1.08
ZNF563-201ENST00000293725 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
ZNF563-201ENST00000293725 ANP32CO43423 234 aa21.78■■□□□ 1.08
ZNF563-201ENST00000293725 ERICH6Q7L0X2 663 aa21.78■■□□□ 1.08
ZNF563-201ENST00000293725 CCER2I3L3R5 266 aa21.77■■□□□ 1.08
ZNF563-201ENST00000293725 PRXQ9BXM0 1461 aa21.77■■□□□ 1.08
ZNF563-201ENST00000293725 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
ZNF563-201ENST00000293725 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms