RNA–Protein interactions for RNA: ENST00000379951.6

LEF1-202, Transcript of lymphoid enhancer binding factor 1, humanhuman

TSL 1 (best) BASIC

Gene LEF1, Length 3,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEF1-202ENST00000379951 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
LEF1-202ENST00000379951 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
LEF1-202ENST00000379951 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
LEF1-202ENST00000379951 SUPT5HO00267 1087 aaKnown RBP27.11■■□□□ 1.93
LEF1-202ENST00000379951 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
LEF1-202ENST00000379951 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.89
LEF1-202ENST00000379951 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
LEF1-202ENST00000379951 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
LEF1-202ENST00000379951 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
LEF1-202ENST00000379951 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
LEF1-202ENST00000379951 EHMT2Q96KQ7 1210 aa25.66■■□□□ 1.7
LEF1-202ENST00000379951 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
LEF1-202ENST00000379951 HRCP23327 699 aa25.48■■□□□ 1.67
LEF1-202ENST00000379951 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
LEF1-202ENST00000379951 ABCC9O60706 1549 aa25.4■■□□□ 1.66
LEF1-202ENST00000379951 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
LEF1-202ENST00000379951 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
LEF1-202ENST00000379951 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
LEF1-202ENST00000379951 NACADO15069 1562 aa24.91■■□□□ 1.58
LEF1-202ENST00000379951 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
LEF1-202ENST00000379951 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
LEF1-202ENST00000379951 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.55
LEF1-202ENST00000379951 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
LEF1-202ENST00000379951 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
LEF1-202ENST00000379951 WIZO95785 1651 aa24.54■■□□□ 1.52
LEF1-202ENST00000379951 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
LEF1-202ENST00000379951 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
LEF1-202ENST00000379951 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
LEF1-202ENST00000379951 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.5
LEF1-202ENST00000379951 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
LEF1-202ENST00000379951 SMARCA4P51532 1647 aa24.18■■□□□ 1.46
LEF1-202ENST00000379951 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
LEF1-202ENST00000379951 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
LEF1-202ENST00000379951 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
LEF1-202ENST00000379951 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.44
LEF1-202ENST00000379951 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
LEF1-202ENST00000379951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
LEF1-202ENST00000379951 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
LEF1-202ENST00000379951 CCDC88BA6NC98 1476 aa23.98■■□□□ 1.43
LEF1-202ENST00000379951 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.42
LEF1-202ENST00000379951 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
LEF1-202ENST00000379951 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
LEF1-202ENST00000379951 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
LEF1-202ENST00000379951 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
LEF1-202ENST00000379951 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
LEF1-202ENST00000379951 GTF3C3Q9Y5Q9 886 aa23.78■■□□□ 1.4
LEF1-202ENST00000379951 NEUROD1Q13562 356 aa23.76■■□□□ 1.39
LEF1-202ENST00000379951 SOGA1O94964 1423 aa23.63■■□□□ 1.37
LEF1-202ENST00000379951 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.371e-6■■■■■ 58.5
LEF1-202ENST00000379951 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
LEF1-202ENST00000379951 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.36
LEF1-202ENST00000379951 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
LEF1-202ENST00000379951 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
LEF1-202ENST00000379951 CENPBP07199 599 aaPredicted RBP23.53■■□□□ 1.36
LEF1-202ENST00000379951 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
LEF1-202ENST00000379951 EEA1Q15075 1411 aa23.48■■□□□ 1.35
LEF1-202ENST00000379951 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
LEF1-202ENST00000379951 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
LEF1-202ENST00000379951 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
LEF1-202ENST00000379951 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
LEF1-202ENST00000379951 APLP2Q06481 763 aa23.38■■□□□ 1.33
LEF1-202ENST00000379951 KIF21BO75037 1637 aa23.35■■□□□ 1.33
LEF1-202ENST00000379951 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
LEF1-202ENST00000379951 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
LEF1-202ENST00000379951 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
LEF1-202ENST00000379951 ITGAEP38570 1179 aa23.21■■□□□ 1.31
LEF1-202ENST00000379951 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
LEF1-202ENST00000379951 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
LEF1-202ENST00000379951 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
LEF1-202ENST00000379951 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
LEF1-202ENST00000379951 RAPGEF2Q9Y4G8 1499 aa23.07■■□□□ 1.28
LEF1-202ENST00000379951 MYT1Q01538 1121 aa23.05■■□□□ 1.28
LEF1-202ENST00000379951 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
LEF1-202ENST00000379951 CLIP1P30622 1438 aa22.97■■□□□ 1.27
LEF1-202ENST00000379951 MIER1Q8N108 512 aa22.96■■□□□ 1.27
LEF1-202ENST00000379951 VPS8Q8N3P4 1428 aa22.96■■□□□ 1.27
LEF1-202ENST00000379951 CUX1P39880 1505 aa22.95■■□□□ 1.27
LEF1-202ENST00000379951 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
LEF1-202ENST00000379951 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
LEF1-202ENST00000379951 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
LEF1-202ENST00000379951 ZNF316A6NFI3 1004 aaPredicted RBP22.9■■□□□ 1.26
LEF1-202ENST00000379951 CFTRP13569 1480 aa22.86■■□□□ 1.25
LEF1-202ENST00000379951 P3H3Q8IVL6 736 aa22.83■■□□□ 1.25
LEF1-202ENST00000379951 ARAP1Q96P48 1450 aa22.82■■□□□ 1.24
LEF1-202ENST00000379951 BCANQ96GW7 911 aa22.76■■□□□ 1.23
LEF1-202ENST00000379951 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
LEF1-202ENST00000379951 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
LEF1-202ENST00000379951 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
LEF1-202ENST00000379951 ARHGAP35Q9NRY4 1499 aa22.58■■□□□ 1.21
LEF1-202ENST00000379951 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
LEF1-202ENST00000379951 HIRIP3Q9BW71 556 aaPredicted RBP22.5■■□□□ 1.19
LEF1-202ENST00000379951 CUX2O14529 1486 aa22.49■■□□□ 1.19
LEF1-202ENST00000379951 IGF1RP08069 1367 aa22.48■■□□□ 1.19
LEF1-202ENST00000379951 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
LEF1-202ENST00000379951 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
LEF1-202ENST00000379951 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
LEF1-202ENST00000379951 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
LEF1-202ENST00000379951 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
LEF1-202ENST00000379951 MAP3K1Q13233 1512 aa22.39■■□□□ 1.17
LEF1-202ENST00000379951 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms