RNA–Protein interactions for RNA: ENST00000417816.2

NEBL-203, Transcript of nebulette, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEBL, Length 3,008 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEBL-203ENST00000417816 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
NEBL-203ENST00000417816 SHROOM4Q9ULL8 1493 aa27.3■■□□□ 1.96
NEBL-203ENST00000417816 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
NEBL-203ENST00000417816 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
NEBL-203ENST00000417816 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
NEBL-203ENST00000417816 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
NEBL-203ENST00000417816 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
NEBL-203ENST00000417816 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
NEBL-203ENST00000417816 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
NEBL-203ENST00000417816 HRCP23327 699 aa25.38■■□□□ 1.65
NEBL-203ENST00000417816 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
NEBL-203ENST00000417816 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
NEBL-203ENST00000417816 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
NEBL-203ENST00000417816 SCRIBQ14160 1630 aa25.2■■□□□ 1.63
NEBL-203ENST00000417816 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
NEBL-203ENST00000417816 ABCC9O60706 1549 aa25.14■■□□□ 1.61
NEBL-203ENST00000417816 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
NEBL-203ENST00000417816 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
NEBL-203ENST00000417816 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.57
NEBL-203ENST00000417816 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
NEBL-203ENST00000417816 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
NEBL-203ENST00000417816 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
NEBL-203ENST00000417816 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.55
NEBL-203ENST00000417816 NACADO15069 1562 aa24.67■■□□□ 1.54
NEBL-203ENST00000417816 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
NEBL-203ENST00000417816 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
NEBL-203ENST00000417816 WIZO95785 1651 aa24.46■■□□□ 1.51
NEBL-203ENST00000417816 MYT1Q01538 1121 aa24.25■■□□□ 1.47
NEBL-203ENST00000417816 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
NEBL-203ENST00000417816 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
NEBL-203ENST00000417816 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
NEBL-203ENST00000417816 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
NEBL-203ENST00000417816 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
NEBL-203ENST00000417816 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
NEBL-203ENST00000417816 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
NEBL-203ENST00000417816 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
NEBL-203ENST00000417816 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
NEBL-203ENST00000417816 SMARCA2P51531 1590 aa23.89■■□□□ 1.42
NEBL-203ENST00000417816 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
NEBL-203ENST00000417816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.86■■□□□ 1.41
NEBL-203ENST00000417816 SOGA1O94964 1423 aa23.85■■□□□ 1.41
NEBL-203ENST00000417816 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
NEBL-203ENST00000417816 CCER1Q8TC90 406 aaPredicted RBP23.74■■□□□ 1.39
NEBL-203ENST00000417816 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
NEBL-203ENST00000417816 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
NEBL-203ENST00000417816 CEP162Q5TB80 1403 aa23.71■■□□□ 1.39
NEBL-203ENST00000417816 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
NEBL-203ENST00000417816 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
NEBL-203ENST00000417816 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.38
NEBL-203ENST00000417816 TNIKQ9UKE5 1360 aa23.62■■□□□ 1.37
NEBL-203ENST00000417816 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
NEBL-203ENST00000417816 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.37
NEBL-203ENST00000417816 EEA1Q15075 1411 aa23.52■■□□□ 1.36
NEBL-203ENST00000417816 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
NEBL-203ENST00000417816 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
NEBL-203ENST00000417816 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
NEBL-203ENST00000417816 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
NEBL-203ENST00000417816 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
NEBL-203ENST00000417816 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
NEBL-203ENST00000417816 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
NEBL-203ENST00000417816 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
NEBL-203ENST00000417816 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
NEBL-203ENST00000417816 CLIP1P30622 1438 aa23.26■■□□□ 1.31
NEBL-203ENST00000417816 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
NEBL-203ENST00000417816 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
NEBL-203ENST00000417816 KIF21BO75037 1637 aa23.17■■□□□ 1.3
NEBL-203ENST00000417816 APLP2Q06481 763 aa23.16■■□□□ 1.3
NEBL-203ENST00000417816 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
NEBL-203ENST00000417816 BCL11AQ9H165 835 aa23.1■■□□□ 1.29
NEBL-203ENST00000417816 ZNF316A6NFI3 1004 aaPredicted RBP23.04■■□□□ 1.28
NEBL-203ENST00000417816 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
NEBL-203ENST00000417816 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
NEBL-203ENST00000417816 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
NEBL-203ENST00000417816 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
NEBL-203ENST00000417816 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
NEBL-203ENST00000417816 CUX1P39880 1505 aa22.88■■□□□ 1.25
NEBL-203ENST00000417816 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
NEBL-203ENST00000417816 ARAP1Q96P48 1450 aa22.83■■□□□ 1.24
NEBL-203ENST00000417816 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
NEBL-203ENST00000417816 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
NEBL-203ENST00000417816 MIER1Q8N108 512 aa22.81■■□□□ 1.24
NEBL-203ENST00000417816 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
NEBL-203ENST00000417816 CFTRP13569 1480 aa22.77■■□□□ 1.24
NEBL-203ENST00000417816 ITGAEP38570 1179 aa22.71■■□□□ 1.23
NEBL-203ENST00000417816 DHX57Q6P158 1386 aaKnown RBP22.67■■□□□ 1.22
NEBL-203ENST00000417816 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.22
NEBL-203ENST00000417816 CUX2O14529 1486 aa22.63■■□□□ 1.21
NEBL-203ENST00000417816 IGF1RP08069 1367 aa22.62■■□□□ 1.21
NEBL-203ENST00000417816 PRKCSHP14314 528 aaPredicted RBP22.61■■□□□ 1.21
NEBL-203ENST00000417816 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.21
NEBL-203ENST00000417816 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
NEBL-203ENST00000417816 RRBP1Q9P2E9 1410 aaKnown RBP22.56■■□□□ 1.2
NEBL-203ENST00000417816 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
NEBL-203ENST00000417816 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
NEBL-203ENST00000417816 P3H3Q8IVL6 736 aa22.53■■□□□ 1.2
NEBL-203ENST00000417816 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
NEBL-203ENST00000417816 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
NEBL-203ENST00000417816 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
NEBL-203ENST00000417816 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
NEBL-203ENST00000417816 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms