RNA–Protein interactions for RNA: ENST00000638281.1

GFAP-225, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 2,099 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-225ENST00000638281 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
GFAP-225ENST00000638281 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
GFAP-225ENST00000638281 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
GFAP-225ENST00000638281 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
GFAP-225ENST00000638281 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
GFAP-225ENST00000638281 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
GFAP-225ENST00000638281 ABCC9O60706 1549 aa28.56■■■□□ 2.16
GFAP-225ENST00000638281 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
GFAP-225ENST00000638281 NACADO15069 1562 aa28.14■■■□□ 2.1
GFAP-225ENST00000638281 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
GFAP-225ENST00000638281 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
GFAP-225ENST00000638281 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
GFAP-225ENST00000638281 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
GFAP-225ENST00000638281 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
GFAP-225ENST00000638281 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
GFAP-225ENST00000638281 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
GFAP-225ENST00000638281 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
GFAP-225ENST00000638281 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
GFAP-225ENST00000638281 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
GFAP-225ENST00000638281 WIZO95785 1651 aa26.8■■□□□ 1.88
GFAP-225ENST00000638281 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
GFAP-225ENST00000638281 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
GFAP-225ENST00000638281 TOP2AP11388 1531 aaKnown RBP26.47■■□□□ 1.83
GFAP-225ENST00000638281 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
GFAP-225ENST00000638281 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
GFAP-225ENST00000638281 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
GFAP-225ENST00000638281 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
GFAP-225ENST00000638281 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
GFAP-225ENST00000638281 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
GFAP-225ENST00000638281 NCAPD3P42695 1498 aa26■■□□□ 1.75
GFAP-225ENST00000638281 TRIM41Q8WV44 630 aa26■■□□□ 1.75
GFAP-225ENST00000638281 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
GFAP-225ENST00000638281 CC2D2AQ9P2K1 1620 aa25.81■■□□□ 1.72
GFAP-225ENST00000638281 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
GFAP-225ENST00000638281 LOC105371045A0A1W2PR82 267 aa25.68■■□□□ 1.7
GFAP-225ENST00000638281 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
GFAP-225ENST00000638281 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
GFAP-225ENST00000638281 CFTRP13569 1480 aa25.5■■□□□ 1.67
GFAP-225ENST00000638281 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
GFAP-225ENST00000638281 HRCP23327 699 aa25.42■■□□□ 1.66
GFAP-225ENST00000638281 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
GFAP-225ENST00000638281 SOGA1O94964 1423 aa25.37■■□□□ 1.65
GFAP-225ENST00000638281 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
GFAP-225ENST00000638281 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
GFAP-225ENST00000638281 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
GFAP-225ENST00000638281 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
GFAP-225ENST00000638281 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
GFAP-225ENST00000638281 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
GFAP-225ENST00000638281 CUX1P39880 1505 aa25.23■■□□□ 1.63
GFAP-225ENST00000638281 EEA1Q15075 1411 aa25.22■■□□□ 1.63
GFAP-225ENST00000638281 NESP48681 1621 aa25.16■■□□□ 1.62
GFAP-225ENST00000638281 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
GFAP-225ENST00000638281 CSRNP3Q8WYN3 585 aa25.15■■□□□ 1.62
GFAP-225ENST00000638281 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
GFAP-225ENST00000638281 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
GFAP-225ENST00000638281 GOLGA3Q08378 1498 aa24.94■■□□□ 1.58
GFAP-225ENST00000638281 KIF21BO75037 1637 aa24.93■■□□□ 1.58
GFAP-225ENST00000638281 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
GFAP-225ENST00000638281 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
GFAP-225ENST00000638281 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
GFAP-225ENST00000638281 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.57
GFAP-225ENST00000638281 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
GFAP-225ENST00000638281 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
GFAP-225ENST00000638281 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
GFAP-225ENST00000638281 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
GFAP-225ENST00000638281 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
GFAP-225ENST00000638281 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
GFAP-225ENST00000638281 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
GFAP-225ENST00000638281 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
GFAP-225ENST00000638281 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
GFAP-225ENST00000638281 CUX2O14529 1486 aa24.79■■□□□ 1.56
GFAP-225ENST00000638281 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
GFAP-225ENST00000638281 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
GFAP-225ENST00000638281 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
GFAP-225ENST00000638281 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
GFAP-225ENST00000638281 IGF1RP08069 1367 aa24.67■■□□□ 1.54
GFAP-225ENST00000638281 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
GFAP-225ENST00000638281 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
GFAP-225ENST00000638281 CLIP1P30622 1438 aa24.58■■□□□ 1.52
GFAP-225ENST00000638281 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
GFAP-225ENST00000638281 MRC2Q9UBG0 1479 aa24.56■■□□□ 1.52
GFAP-225ENST00000638281 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
GFAP-225ENST00000638281 ZEB1P37275 1124 aaPredicted RBP24.49■■□□□ 1.51
GFAP-225ENST00000638281 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
GFAP-225ENST00000638281 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
GFAP-225ENST00000638281 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
GFAP-225ENST00000638281 ABCA5Q8WWZ7 1642 aa24.45■■□□□ 1.51
GFAP-225ENST00000638281 WDR62O43379 1518 aa24.42■■□□□ 1.5
GFAP-225ENST00000638281 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
GFAP-225ENST00000638281 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
GFAP-225ENST00000638281 CUL7Q14999 1698 aa24.38■■□□□ 1.49
GFAP-225ENST00000638281 VPS8Q8N3P4 1428 aa24.37■■□□□ 1.49
GFAP-225ENST00000638281 ARAP1Q96P48 1450 aa24.33■■□□□ 1.49
GFAP-225ENST00000638281 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
GFAP-225ENST00000638281 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
GFAP-225ENST00000638281 ARHGAP35Q9NRY4 1499 aa24.28■■□□□ 1.48
GFAP-225ENST00000638281 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.48
GFAP-225ENST00000638281 TTBK1Q5TCY1 1321 aaPredicted RBP24.24■■□□□ 1.47
GFAP-225ENST00000638281 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
GFAP-225ENST00000638281 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms