Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 AL590326.2-201ENST00000625139 305 ntBASIC12.83□□□□□ -0.36
IFNA1P01562 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
IFNA1P01562 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 TOP3BP1-201ENST00000420768 1380 ntBASIC12.82□□□□□ -0.36
IFNA1P01562 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 FP325330.2-201ENST00000624219 5630 ntBASIC12.82□□□□□ -0.36
IFNA1P01562 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.82□□□□□ -0.36
IFNA1P01562 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.82□□□□□ -0.36
IFNA1P01562 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.82□□□□□ -0.36
IFNA1P01562 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 AP000525.1-201ENST00000608286 694 ntBASIC12.82□□□□□ -0.36
IFNA1P01562 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
IFNA1P01562 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 AL359736.2-201ENST00000621992 437 ntBASIC12.82□□□□□ -0.36
IFNA1P01562 AL049637.2-201ENST00000641778 930 ntBASIC12.82□□□□□ -0.36
IFNA1P01562 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.82□□□□□ -0.36
IFNA1P01562 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.82□□□□□ -0.36
IFNA1P01562 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.82□□□□□ -0.36
IFNA1P01562 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IFNA1P01562 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
IFNA1P01562 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
IFNA1P01562 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.81□□□□□ -0.36
IFNA1P01562 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IFNA1P01562 AC007686.3-201ENST00000619017 3487 ntBASIC12.81□□□□□ -0.36
IFNA1P01562 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms