RNA–Protein interactions for RNA: ENST00000334274.8

TCP11L1-201, Transcript of t-complex 11 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCP11L1, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCP11L1-201ENST00000334274 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
TCP11L1-201ENST00000334274 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
TCP11L1-201ENST00000334274 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
TCP11L1-201ENST00000334274 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
TCP11L1-201ENST00000334274 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
TCP11L1-201ENST00000334274 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
TCP11L1-201ENST00000334274 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
TCP11L1-201ENST00000334274 ABCC9O60706 1549 aa27.13■■□□□ 1.93
TCP11L1-201ENST00000334274 MYO15BQ96JP2 1530 aa26.99■■□□□ 1.91
TCP11L1-201ENST00000334274 NACADO15069 1562 aa26.76■■□□□ 1.87
TCP11L1-201ENST00000334274 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
TCP11L1-201ENST00000334274 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
TCP11L1-201ENST00000334274 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
TCP11L1-201ENST00000334274 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
TCP11L1-201ENST00000334274 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
TCP11L1-201ENST00000334274 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
TCP11L1-201ENST00000334274 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
TCP11L1-201ENST00000334274 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
TCP11L1-201ENST00000334274 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
TCP11L1-201ENST00000334274 WIZO95785 1651 aa25.66■■□□□ 1.7
TCP11L1-201ENST00000334274 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
TCP11L1-201ENST00000334274 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
TCP11L1-201ENST00000334274 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
TCP11L1-201ENST00000334274 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
TCP11L1-201ENST00000334274 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
TCP11L1-201ENST00000334274 SMARCA4P51532 1647 aa25.31■■□□□ 1.64
TCP11L1-201ENST00000334274 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
TCP11L1-201ENST00000334274 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
TCP11L1-201ENST00000334274 TOP2AP11388 1531 aaKnown RBP25.06■■□□□ 1.6
TCP11L1-201ENST00000334274 HRCP23327 699 aa24.99■■□□□ 1.59
TCP11L1-201ENST00000334274 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
TCP11L1-201ENST00000334274 SMARCA2P51531 1590 aa24.98■■□□□ 1.59
TCP11L1-201ENST00000334274 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
TCP11L1-201ENST00000334274 PCGF6Q9BYE7 350 aa24.94■■□□□ 1.58
TCP11L1-201ENST00000334274 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
TCP11L1-201ENST00000334274 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
TCP11L1-201ENST00000334274 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
TCP11L1-201ENST00000334274 TRIM26Q12899 539 aaPredicted RBP24.69■■□□□ 1.54
TCP11L1-201ENST00000334274 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
TCP11L1-201ENST00000334274 HMGXB3Q12766 1538 aa24.64■■□□□ 1.54
TCP11L1-201ENST00000334274 SOGA1O94964 1423 aa24.63■■□□□ 1.53
TCP11L1-201ENST00000334274 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
TCP11L1-201ENST00000334274 RUSC2Q8N2Y8 1516 aa24.58■■□□□ 1.53
TCP11L1-201ENST00000334274 TTBK1Q5TCY1 1321 aaPredicted RBP24.49■■□□□ 1.51
TCP11L1-201ENST00000334274 WRNQ14191 1432 aaPredicted RBP eCLIP24.48■■□□□ 1.51
TCP11L1-201ENST00000334274 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
TCP11L1-201ENST00000334274 RANGAP1P46060 587 aaPredicted RBP24.4■■□□□ 1.5
TCP11L1-201ENST00000334274 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.5
TCP11L1-201ENST00000334274 EEA1Q15075 1411 aa24.37■■□□□ 1.49
TCP11L1-201ENST00000334274 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
TCP11L1-201ENST00000334274 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
TCP11L1-201ENST00000334274 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
TCP11L1-201ENST00000334274 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
TCP11L1-201ENST00000334274 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
TCP11L1-201ENST00000334274 KIF21BO75037 1637 aa24.07■■□□□ 1.44
TCP11L1-201ENST00000334274 CFTRP13569 1480 aa24.06■■□□□ 1.44
TCP11L1-201ENST00000334274 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
TCP11L1-201ENST00000334274 CUX1P39880 1505 aa24.04■■□□□ 1.44
TCP11L1-201ENST00000334274 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
TCP11L1-201ENST00000334274 TOP2BQ02880 1626 aa24■■□□□ 1.43
TCP11L1-201ENST00000334274 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
TCP11L1-201ENST00000334274 NESP48681 1621 aa23.99■■□□□ 1.43
TCP11L1-201ENST00000334274 BIVM-ERCC5R4GMW8 1640 aa23.98■■□□□ 1.43
TCP11L1-201ENST00000334274 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
TCP11L1-201ENST00000334274 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
TCP11L1-201ENST00000334274 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
TCP11L1-201ENST00000334274 CLIP1P30622 1438 aa23.81■■□□□ 1.4
TCP11L1-201ENST00000334274 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
TCP11L1-201ENST00000334274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
TCP11L1-201ENST00000334274 CUX2O14529 1486 aa23.76■■□□□ 1.39
TCP11L1-201ENST00000334274 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
TCP11L1-201ENST00000334274 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
TCP11L1-201ENST00000334274 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
TCP11L1-201ENST00000334274 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
TCP11L1-201ENST00000334274 PRXQ9BXM0 1461 aa23.65■■□□□ 1.38
TCP11L1-201ENST00000334274 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
TCP11L1-201ENST00000334274 IGF1RP08069 1367 aa23.61■■□□□ 1.37
TCP11L1-201ENST00000334274 P3H3Q8IVL6 736 aa23.59■■□□□ 1.37
TCP11L1-201ENST00000334274 APLP2Q06481 763 aa23.58■■□□□ 1.37
TCP11L1-201ENST00000334274 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
TCP11L1-201ENST00000334274 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
TCP11L1-201ENST00000334274 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
TCP11L1-201ENST00000334274 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
TCP11L1-201ENST00000334274 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
TCP11L1-201ENST00000334274 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
TCP11L1-201ENST00000334274 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
TCP11L1-201ENST00000334274 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
TCP11L1-201ENST00000334274 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
TCP11L1-201ENST00000334274 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
TCP11L1-201ENST00000334274 KANK4Q5T7N3 995 aaPredicted RBP23.47■■□□□ 1.35
TCP11L1-201ENST00000334274 ATP1B4Q9UN42 357 aaPredicted RBP23.46■■□□□ 1.35
TCP11L1-201ENST00000334274 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
TCP11L1-201ENST00000334274 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
TCP11L1-201ENST00000334274 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
TCP11L1-201ENST00000334274 WDR62O43379 1518 aa23.33■■□□□ 1.33
TCP11L1-201ENST00000334274 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.33
TCP11L1-201ENST00000334274 ITGAEP38570 1179 aa23.3■■□□□ 1.32
TCP11L1-201ENST00000334274 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
TCP11L1-201ENST00000334274 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
TCP11L1-201ENST00000334274 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms