RNA–Protein interactions for RNA: ENST00000528203.5

PAK1-210, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 2 BASIC

Gene PAK1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-210ENST00000528203 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
PAK1-210ENST00000528203 CCDC180Q9P1Z9 1646 aa29.3■■■□□ 2.28
PAK1-210ENST00000528203 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
PAK1-210ENST00000528203 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
PAK1-210ENST00000528203 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
PAK1-210ENST00000528203 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
PAK1-210ENST00000528203 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
PAK1-210ENST00000528203 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
PAK1-210ENST00000528203 ABCC9O60706 1549 aa27.18■■□□□ 1.94
PAK1-210ENST00000528203 NACADO15069 1562 aa27.14■■□□□ 1.94
PAK1-210ENST00000528203 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
PAK1-210ENST00000528203 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
PAK1-210ENST00000528203 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
PAK1-210ENST00000528203 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
PAK1-210ENST00000528203 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
PAK1-210ENST00000528203 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
PAK1-210ENST00000528203 MROH2BQ7Z745 1585 aa26.18■■□□□ 1.78
PAK1-210ENST00000528203 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.77
PAK1-210ENST00000528203 WIZO95785 1651 aa26.01■■□□□ 1.75
PAK1-210ENST00000528203 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
PAK1-210ENST00000528203 BICRAQ9NZM4 1560 aa25.92■■□□□ 1.74
PAK1-210ENST00000528203 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
PAK1-210ENST00000528203 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
PAK1-210ENST00000528203 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
PAK1-210ENST00000528203 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.68
PAK1-210ENST00000528203 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
PAK1-210ENST00000528203 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
PAK1-210ENST00000528203 CCDC88BA6NC98 1476 aa25.49■■□□□ 1.67
PAK1-210ENST00000528203 LOC105371045A0A1W2PR82 267 aa25.36■■□□□ 1.65
PAK1-210ENST00000528203 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
PAK1-210ENST00000528203 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
PAK1-210ENST00000528203 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
PAK1-210ENST00000528203 FAM9AQ8IZU1 332 aaPredicted RBP25.15■■□□□ 1.62
PAK1-210ENST00000528203 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
PAK1-210ENST00000528203 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
PAK1-210ENST00000528203 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
PAK1-210ENST00000528203 EEA1Q15075 1411 aa24.92■■□□□ 1.58
PAK1-210ENST00000528203 PCGF6Q9BYE7 350 aa24.86■■□□□ 1.57
PAK1-210ENST00000528203 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
PAK1-210ENST00000528203 SOGA1O94964 1423 aa24.79■■□□□ 1.56
PAK1-210ENST00000528203 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
PAK1-210ENST00000528203 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
PAK1-210ENST00000528203 TOP2BQ02880 1626 aa24.67■■□□□ 1.54
PAK1-210ENST00000528203 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
PAK1-210ENST00000528203 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.54
PAK1-210ENST00000528203 CFTRP13569 1480 aa24.63■■□□□ 1.53
PAK1-210ENST00000528203 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
PAK1-210ENST00000528203 HRCP23327 699 aa24.63■■□□□ 1.53
PAK1-210ENST00000528203 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
PAK1-210ENST00000528203 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
PAK1-210ENST00000528203 GOLGA3Q08378 1498 aa24.6■■□□□ 1.53
PAK1-210ENST00000528203 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
PAK1-210ENST00000528203 KIF21BO75037 1637 aa24.55■■□□□ 1.52
PAK1-210ENST00000528203 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
PAK1-210ENST00000528203 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
PAK1-210ENST00000528203 CUX1P39880 1505 aa24.45■■□□□ 1.5
PAK1-210ENST00000528203 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
PAK1-210ENST00000528203 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
PAK1-210ENST00000528203 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
PAK1-210ENST00000528203 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
PAK1-210ENST00000528203 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
PAK1-210ENST00000528203 PRXQ9BXM0 1461 aa24.22■■□□□ 1.47
PAK1-210ENST00000528203 CLIP1P30622 1438 aa24.21■■□□□ 1.47
PAK1-210ENST00000528203 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
PAK1-210ENST00000528203 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
PAK1-210ENST00000528203 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
PAK1-210ENST00000528203 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
PAK1-210ENST00000528203 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
PAK1-210ENST00000528203 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
PAK1-210ENST00000528203 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.45
PAK1-210ENST00000528203 CUX2O14529 1486 aa24.08■■□□□ 1.44
PAK1-210ENST00000528203 NESP48681 1621 aa24.02■■□□□ 1.44
PAK1-210ENST00000528203 TOPBP1Q92547 1522 aa23.98■■□□□ 1.43
PAK1-210ENST00000528203 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
PAK1-210ENST00000528203 IGF1RP08069 1367 aa23.94■■□□□ 1.42
PAK1-210ENST00000528203 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
PAK1-210ENST00000528203 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
PAK1-210ENST00000528203 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
PAK1-210ENST00000528203 APLP2Q06481 763 aa23.9■■□□□ 1.42
PAK1-210ENST00000528203 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
PAK1-210ENST00000528203 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
PAK1-210ENST00000528203 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
PAK1-210ENST00000528203 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
PAK1-210ENST00000528203 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
PAK1-210ENST00000528203 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
PAK1-210ENST00000528203 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
PAK1-210ENST00000528203 CUL7Q14999 1698 aa23.78■■□□□ 1.4
PAK1-210ENST00000528203 ARHGAP35Q9NRY4 1499 aa23.76■■□□□ 1.39
PAK1-210ENST00000528203 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
PAK1-210ENST00000528203 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
PAK1-210ENST00000528203 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
PAK1-210ENST00000528203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
PAK1-210ENST00000528203 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
PAK1-210ENST00000528203 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
PAK1-210ENST00000528203 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.37
PAK1-210ENST00000528203 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.36
PAK1-210ENST00000528203 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
PAK1-210ENST00000528203 MAP3K1Q13233 1512 aa23.56■■□□□ 1.36
PAK1-210ENST00000528203 FHAD1B1AJZ9 1412 aa23.55■■□□□ 1.36
PAK1-210ENST00000528203 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms