RNA–Protein interactions for RNA: ENST00000625514.2

KCNQ2-209, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5 BASIC

Gene KCNQ2, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-209ENST00000625514 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
KCNQ2-209ENST00000625514 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
KCNQ2-209ENST00000625514 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
KCNQ2-209ENST00000625514 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
KCNQ2-209ENST00000625514 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
KCNQ2-209ENST00000625514 ABCC9O60706 1549 aa29.53■■■□□ 2.32
KCNQ2-209ENST00000625514 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
KCNQ2-209ENST00000625514 DCAF1Q9Y4B6 1507 aa28.97■■■□□ 2.23
KCNQ2-209ENST00000625514 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
KCNQ2-209ENST00000625514 NACADO15069 1562 aa28.49■■■□□ 2.15
KCNQ2-209ENST00000625514 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
KCNQ2-209ENST00000625514 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
KCNQ2-209ENST00000625514 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
KCNQ2-209ENST00000625514 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
KCNQ2-209ENST00000625514 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
KCNQ2-209ENST00000625514 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
KCNQ2-209ENST00000625514 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
KCNQ2-209ENST00000625514 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
KCNQ2-209ENST00000625514 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
KCNQ2-209ENST00000625514 WIZO95785 1651 aa27.53■■■□□ 2
KCNQ2-209ENST00000625514 BAZ1AQ9NRL2 1556 aaPredicted RBP27.38■■□□□ 1.97
KCNQ2-209ENST00000625514 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
KCNQ2-209ENST00000625514 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
KCNQ2-209ENST00000625514 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
KCNQ2-209ENST00000625514 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
KCNQ2-209ENST00000625514 LOC105371045A0A1W2PR82 267 aa27.03■■□□□ 1.92
KCNQ2-209ENST00000625514 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
KCNQ2-209ENST00000625514 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
KCNQ2-209ENST00000625514 ATAD2BQ9ULI0 1458 aa26.89■■□□□ 1.89
KCNQ2-209ENST00000625514 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
KCNQ2-209ENST00000625514 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
KCNQ2-209ENST00000625514 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
KCNQ2-209ENST00000625514 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
KCNQ2-209ENST00000625514 PEG3Q9GZU2 1588 aa26.64■■□□□ 1.85
KCNQ2-209ENST00000625514 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
KCNQ2-209ENST00000625514 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
KCNQ2-209ENST00000625514 DNAJC5BQ9UF47 199 aa26.39■■□□□ 1.82
KCNQ2-209ENST00000625514 SOGA1O94964 1423 aa26.28■■□□□ 1.8
KCNQ2-209ENST00000625514 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
KCNQ2-209ENST00000625514 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
KCNQ2-209ENST00000625514 RUSC2Q8N2Y8 1516 aa26.22■■□□□ 1.79
KCNQ2-209ENST00000625514 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
KCNQ2-209ENST00000625514 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
KCNQ2-209ENST00000625514 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
KCNQ2-209ENST00000625514 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
KCNQ2-209ENST00000625514 CSRNP3Q8WYN3 585 aa26.02■■□□□ 1.76
KCNQ2-209ENST00000625514 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
KCNQ2-209ENST00000625514 CFTRP13569 1480 aa26■■□□□ 1.75
KCNQ2-209ENST00000625514 NESP48681 1621 aa26■■□□□ 1.75
KCNQ2-209ENST00000625514 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
KCNQ2-209ENST00000625514 TTBK1Q5TCY1 1321 aaPredicted RBP25.9■■□□□ 1.74
KCNQ2-209ENST00000625514 CUX1P39880 1505 aa25.85■■□□□ 1.73
KCNQ2-209ENST00000625514 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
KCNQ2-209ENST00000625514 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
KCNQ2-209ENST00000625514 EEA1Q15075 1411 aa25.66■■□□□ 1.7
KCNQ2-209ENST00000625514 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
KCNQ2-209ENST00000625514 RAPGEF2Q9Y4G8 1499 aa25.63■■□□□ 1.69
KCNQ2-209ENST00000625514 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
KCNQ2-209ENST00000625514 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
KCNQ2-209ENST00000625514 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
KCNQ2-209ENST00000625514 CUX2O14529 1486 aa25.56■■□□□ 1.68
KCNQ2-209ENST00000625514 TNIKQ9UKE5 1360 aa25.55■■□□□ 1.68
KCNQ2-209ENST00000625514 RAD54L2Q9Y4B4 1467 aa25.55■■□□□ 1.68
KCNQ2-209ENST00000625514 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
KCNQ2-209ENST00000625514 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
KCNQ2-209ENST00000625514 KIF27Q86VH2 1401 aa25.51■■□□□ 1.68
KCNQ2-209ENST00000625514 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
KCNQ2-209ENST00000625514 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
KCNQ2-209ENST00000625514 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
KCNQ2-209ENST00000625514 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
KCNQ2-209ENST00000625514 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
KCNQ2-209ENST00000625514 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
KCNQ2-209ENST00000625514 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
KCNQ2-209ENST00000625514 IGF1RP08069 1367 aa25.37■■□□□ 1.65
KCNQ2-209ENST00000625514 CLIP1P30622 1438 aa25.37■■□□□ 1.65
KCNQ2-209ENST00000625514 KIF21BO75037 1637 aa25.35■■□□□ 1.65
KCNQ2-209ENST00000625514 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
KCNQ2-209ENST00000625514 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.64
KCNQ2-209ENST00000625514 PRXQ9BXM0 1461 aa25.32■■□□□ 1.64
KCNQ2-209ENST00000625514 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
KCNQ2-209ENST00000625514 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
KCNQ2-209ENST00000625514 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
KCNQ2-209ENST00000625514 HRCP23327 699 aa25.14■■□□□ 1.61
KCNQ2-209ENST00000625514 APLP2Q06481 763 aa25.14■■□□□ 1.61
KCNQ2-209ENST00000625514 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
KCNQ2-209ENST00000625514 ATP1B4Q9UN42 357 aaPredicted RBP25.13■■□□□ 1.61
KCNQ2-209ENST00000625514 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
KCNQ2-209ENST00000625514 AQRO60306 1485 aaKnown RBP eCLIP25.11■■□□□ 1.61
KCNQ2-209ENST00000625514 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
KCNQ2-209ENST00000625514 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
KCNQ2-209ENST00000625514 GAPVD1Q14C86 1478 aa25.04■■□□□ 1.6
KCNQ2-209ENST00000625514 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
KCNQ2-209ENST00000625514 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
KCNQ2-209ENST00000625514 KANK4Q5T7N3 995 aaPredicted RBP24.97■■□□□ 1.59
KCNQ2-209ENST00000625514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.97■■□□□ 1.59
KCNQ2-209ENST00000625514 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
KCNQ2-209ENST00000625514 FBLN2P98095 1184 aa24.95■■□□□ 1.58
KCNQ2-209ENST00000625514 HNRNPUL2Q1KMD3 747 aaKnown RBP24.95■■□□□ 1.58
KCNQ2-209ENST00000625514 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.58
KCNQ2-209ENST00000625514 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms