RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
PRDM16-206ENST00000511072 NISCHQ9Y2I1 1504 aa24.48■■□□□ 1.51
PRDM16-206ENST00000511072 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
PRDM16-206ENST00000511072 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
PRDM16-206ENST00000511072 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
PRDM16-206ENST00000511072 PELP1Q8IZL8 1130 aaKnown RBP22.86■■□□□ 1.25
PRDM16-206ENST00000511072 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
PRDM16-206ENST00000511072 HRCP23327 699 aa22.63■■□□□ 1.21
PRDM16-206ENST00000511072 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
PRDM16-206ENST00000511072 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
PRDM16-206ENST00000511072 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
PRDM16-206ENST00000511072 APLP2Q06481 763 aa22.23■■□□□ 1.15
PRDM16-206ENST00000511072 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
PRDM16-206ENST00000511072 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
PRDM16-206ENST00000511072 MYT1Q01538 1121 aa22.17■■□□□ 1.14
PRDM16-206ENST00000511072 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
PRDM16-206ENST00000511072 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
PRDM16-206ENST00000511072 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
PRDM16-206ENST00000511072 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
PRDM16-206ENST00000511072 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
PRDM16-206ENST00000511072 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
PRDM16-206ENST00000511072 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
PRDM16-206ENST00000511072 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
PRDM16-206ENST00000511072 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
PRDM16-206ENST00000511072 CENPBP07199 599 aaPredicted RBP21.37■■□□□ 1.01
PRDM16-206ENST00000511072 GTF3C3Q9Y5Q9 886 aa21.3■■□□□ 1
PRDM16-206ENST00000511072 ITGAEP38570 1179 aa21.26■□□□□ 0.99
PRDM16-206ENST00000511072 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
PRDM16-206ENST00000511072 ACIN1Q9UKV3 1341 aaKnown RBP21.17■□□□□ 0.98
PRDM16-206ENST00000511072 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
PRDM16-206ENST00000511072 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
PRDM16-206ENST00000511072 ABCC9O60706 1549 aa21.07■□□□□ 0.96
PRDM16-206ENST00000511072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
PRDM16-206ENST00000511072 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
PRDM16-206ENST00000511072 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
PRDM16-206ENST00000511072 NEFLP07196 543 aa20.81■□□□□ 0.92
PRDM16-206ENST00000511072 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
PRDM16-206ENST00000511072 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
PRDM16-206ENST00000511072 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
PRDM16-206ENST00000511072 BCL11AQ9H165 835 aa20.69■□□□□ 0.9
PRDM16-206ENST00000511072 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
PRDM16-206ENST00000511072 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
PRDM16-206ENST00000511072 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
PRDM16-206ENST00000511072 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
PRDM16-206ENST00000511072 P3H3Q8IVL6 736 aa20.41■□□□□ 0.86
PRDM16-206ENST00000511072 TRIM52Q96A61 297 aa20.36■□□□□ 0.85
PRDM16-206ENST00000511072 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
PRDM16-206ENST00000511072 ANP32EQ9BTT0 268 aa20.3■□□□□ 0.84
PRDM16-206ENST00000511072 FBLN2P98095 1184 aa20.29■□□□□ 0.84
PRDM16-206ENST00000511072 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
PRDM16-206ENST00000511072 CCDC180Q9P1Z9 1646 aa20.23■□□□□ 0.83
PRDM16-206ENST00000511072 ZNF326Q5BKZ1 582 aaKnown RBP20.22■□□□□ 0.83
PRDM16-206ENST00000511072 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
PRDM16-206ENST00000511072 BCANQ96GW7 911 aa20.19■□□□□ 0.82
PRDM16-206ENST00000511072 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
PRDM16-206ENST00000511072 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
PRDM16-206ENST00000511072 PRKCSHP14314 528 aaPredicted RBP20.08■□□□□ 0.8
PRDM16-206ENST00000511072 MIER1Q8N108 512 aa20.05■□□□□ 0.8
PRDM16-206ENST00000511072 ANP32CO43423 234 aa19.99■□□□□ 0.79
PRDM16-206ENST00000511072 DAXXQ9UER7 740 aaPredicted RBP19.99■□□□□ 0.79
PRDM16-206ENST00000511072 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
PRDM16-206ENST00000511072 TSHZ2Q9NRE2 1034 aa19.85■□□□□ 0.77
PRDM16-206ENST00000511072 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
PRDM16-206ENST00000511072 CLSPNQ9HAW4 1339 aa19.85■□□□□ 0.77
PRDM16-206ENST00000511072 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
PRDM16-206ENST00000511072 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
PRDM16-206ENST00000511072 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
PRDM16-206ENST00000511072 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
PRDM16-206ENST00000511072 CDK11AQ9UQ88 783 aaPredicted RBP19.67■□□□□ 0.74
PRDM16-206ENST00000511072 FKBP8Q14318 412 aa19.66■□□□□ 0.74
PRDM16-206ENST00000511072 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
PRDM16-206ENST00000511072 CLIP1P30622 1438 aa19.63■□□□□ 0.73
PRDM16-206ENST00000511072 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
PRDM16-206ENST00000511072 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
PRDM16-206ENST00000511072 SALL2Q9Y467 1007 aaPredicted RBP19.58■□□□□ 0.73
PRDM16-206ENST00000511072 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.72
PRDM16-206ENST00000511072 CEP162Q5TB80 1403 aa19.54■□□□□ 0.72
PRDM16-206ENST00000511072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.72
PRDM16-206ENST00000511072 CHGAP10645 457 aaKnown RBP19.52■□□□□ 0.71
PRDM16-206ENST00000511072 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.71
PRDM16-206ENST00000511072 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
PRDM16-206ENST00000511072 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
PRDM16-206ENST00000511072 RRP7BPQ9NSQ0 103 aa19.5■□□□□ 0.71
PRDM16-206ENST00000511072 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
PRDM16-206ENST00000511072 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
PRDM16-206ENST00000511072 SLC24A1O60721 1099 aa19.44■□□□□ 0.7
PRDM16-206ENST00000511072 CANXP27824 592 aaKnown RBP19.44■□□□□ 0.7
PRDM16-206ENST00000511072 ANO8Q9HCE9 1232 aaPredicted RBP19.43■□□□□ 0.7
PRDM16-206ENST00000511072 NBR1Q14596 966 aa19.43■□□□□ 0.7
PRDM16-206ENST00000511072 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
PRDM16-206ENST00000511072 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
PRDM16-206ENST00000511072 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
PRDM16-206ENST00000511072 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
PRDM16-206ENST00000511072 NPM2Q86SE8 214 aaKnown RBP19.39■□□□□ 0.69
PRDM16-206ENST00000511072 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
PRDM16-206ENST00000511072 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
PRDM16-206ENST00000511072 DEKP35659 375 aaKnown RBP19.37■□□□□ 0.69
PRDM16-206ENST00000511072 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
PRDM16-206ENST00000511072 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
PRDM16-206ENST00000511072 RTN4Q9NQC3 1192 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms