RNA–Protein interactions for RNA: ENST00000634017.1

PITPNB-211, Transcript of phosphatidylinositol transfer protein beta, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PITPNB, Length 1,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-211ENST00000634017 NISCHQ9Y2I1 1504 aa46.16■■■■■ 4.98
PITPNB-211ENST00000634017 CCDC180Q9P1Z9 1646 aa41.22■■■■■ 4.19
PITPNB-211ENST00000634017 ABCC9O60706 1549 aa40.36■■■■■ 4.05
PITPNB-211ENST00000634017 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.81
PITPNB-211ENST00000634017 NACADO15069 1562 aa38.74■■■■□ 3.79
PITPNB-211ENST00000634017 MYO15BQ96JP2 1530 aa38.48■■■■□ 3.75
PITPNB-211ENST00000634017 ZCCHC6Q5VYS8 1495 aaKnown RBP38.44■■■■□ 3.74
PITPNB-211ENST00000634017 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
PITPNB-211ENST00000634017 DCAF1Q9Y4B6 1507 aa38.24■■■■□ 3.71
PITPNB-211ENST00000634017 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
PITPNB-211ENST00000634017 BICRAQ9NZM4 1560 aa37.67■■■■□ 3.62
PITPNB-211ENST00000634017 PABPN1Q86U42 306 aaKnown RBP eCLIP37.6■■■■□ 3.61
PITPNB-211ENST00000634017 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
PITPNB-211ENST00000634017 SHROOM4Q9ULL8 1493 aa37.31■■■■□ 3.56
PITPNB-211ENST00000634017 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
PITPNB-211ENST00000634017 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
PITPNB-211ENST00000634017 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
PITPNB-211ENST00000634017 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
PITPNB-211ENST00000634017 SMARCA4P51532 1647 aa35.89■■■■□ 3.34
PITPNB-211ENST00000634017 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
PITPNB-211ENST00000634017 NCAPD3P42695 1498 aa35.71■■■■□ 3.31
PITPNB-211ENST00000634017 ATAD2BQ9ULI0 1458 aa35.69■■■■□ 3.3
PITPNB-211ENST00000634017 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
PITPNB-211ENST00000634017 HMGXB3Q12766 1538 aa35.58■■■■□ 3.29
PITPNB-211ENST00000634017 PEG3Q9GZU2 1588 aa35.58■■■■□ 3.29
PITPNB-211ENST00000634017 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
PITPNB-211ENST00000634017 BAZ1BQ9UIG0 1483 aaKnown RBP35.39■■■■□ 3.26
PITPNB-211ENST00000634017 WIZO95785 1651 aa35.18■■■■□ 3.22
PITPNB-211ENST00000634017 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
PITPNB-211ENST00000634017 NESP48681 1621 aa34.88■■■■□ 3.17
PITPNB-211ENST00000634017 LAMC3Q9Y6N6 1575 aa34.84■■■■□ 3.17
PITPNB-211ENST00000634017 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
PITPNB-211ENST00000634017 ERCC6Q03468 1493 aa34.81■■■■□ 3.16
PITPNB-211ENST00000634017 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
PITPNB-211ENST00000634017 CUX2O14529 1486 aa34.58■■■■□ 3.13
PITPNB-211ENST00000634017 KIF21AQ7Z4S6 1674 aa34.56■■■■□ 3.12
PITPNB-211ENST00000634017 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
PITPNB-211ENST00000634017 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
PITPNB-211ENST00000634017 CFTRP13569 1480 aa34.42■■■■□ 3.1
PITPNB-211ENST00000634017 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
PITPNB-211ENST00000634017 PRDM2Q13029 1718 aa34.28■■■■□ 3.08
PITPNB-211ENST00000634017 FANCD2Q9BXW9 1451 aa34.25■■■■□ 3.07
PITPNB-211ENST00000634017 CEP164Q9UPV0 1460 aa34.24■■■■□ 3.07
PITPNB-211ENST00000634017 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
PITPNB-211ENST00000634017 WDR62O43379 1518 aa34.16■■■■□ 3.06
PITPNB-211ENST00000634017 URB2Q14146 1524 aaKnown RBP33.94■■■■□ 3.02
PITPNB-211ENST00000634017 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
PITPNB-211ENST00000634017 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
PITPNB-211ENST00000634017 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
PITPNB-211ENST00000634017 DNMBPQ6XZF7 1577 aa33.67■■■□□ 2.98
PITPNB-211ENST00000634017 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
PITPNB-211ENST00000634017 IFT140Q96RY7 1462 aa33.53■■■□□ 2.96
PITPNB-211ENST00000634017 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
PITPNB-211ENST00000634017 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.93
PITPNB-211ENST00000634017 CUX1P39880 1505 aa33.38■■■□□ 2.93
PITPNB-211ENST00000634017 ZNF608Q9ULD9 1512 aaPredicted RBP33.37■■■□□ 2.93
PITPNB-211ENST00000634017 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
PITPNB-211ENST00000634017 FGD5Q6ZNL6 1462 aa33.28■■■□□ 2.92
PITPNB-211ENST00000634017 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
PITPNB-211ENST00000634017 SOGA1O94964 1423 aa33.19■■■□□ 2.9
PITPNB-211ENST00000634017 WDR97A6NE52 1622 aa33.16■■■□□ 2.9
PITPNB-211ENST00000634017 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.896e-7■■■□□ 16.7
PITPNB-211ENST00000634017 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
PITPNB-211ENST00000634017 TOP2BQ02880 1626 aa33.07■■■□□ 2.88
PITPNB-211ENST00000634017 WRNQ14191 1432 aaPredicted RBP eCLIP33.06■■■□□ 2.88
PITPNB-211ENST00000634017 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
PITPNB-211ENST00000634017 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
PITPNB-211ENST00000634017 OSCARQ8IYS5 282 aa32.99■■■□□ 2.87
PITPNB-211ENST00000634017 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
PITPNB-211ENST00000634017 CHD1O14646 1710 aa32.94■■■□□ 2.86
PITPNB-211ENST00000634017 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
PITPNB-211ENST00000634017 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
PITPNB-211ENST00000634017 GRIN2BQ13224 1484 aa32.88■■■□□ 2.85
PITPNB-211ENST00000634017 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
PITPNB-211ENST00000634017 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
PITPNB-211ENST00000634017 MAGI1Q96QZ7 1491 aaPredicted RBP32.84■■■□□ 2.85
PITPNB-211ENST00000634017 SYNJ2O15056 1496 aa32.7■■■□□ 2.83
PITPNB-211ENST00000634017 FBLN2P98095 1184 aa32.68■■■□□ 2.82
PITPNB-211ENST00000634017 CHMP7Q8WUX9 453 aaPredicted RBP32.61■■■□□ 2.81
PITPNB-211ENST00000634017 RIMBP3CA6NJZ7 1639 aa32.6■■■□□ 2.81
PITPNB-211ENST00000634017 RIMBP3BA6NNM3 1639 aa32.6■■■□□ 2.81
PITPNB-211ENST00000634017 RIMBP3Q9UFD9 1639 aa32.6■■■□□ 2.81
PITPNB-211ENST00000634017 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
PITPNB-211ENST00000634017 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
PITPNB-211ENST00000634017 CLASP1Q7Z460 1538 aa32.56■■■□□ 2.8
PITPNB-211ENST00000634017 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
PITPNB-211ENST00000634017 GRIN2AQ12879 1464 aa32.47■■■□□ 2.79
PITPNB-211ENST00000634017 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
PITPNB-211ENST00000634017 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
PITPNB-211ENST00000634017 KIF27Q86VH2 1401 aa32.37■■■□□ 2.77
PITPNB-211ENST00000634017 NUP160Q12769 1436 aa32.34■■■□□ 2.77
PITPNB-211ENST00000634017 CEP170Q5SW79 1584 aa32.34■■■□□ 2.77
PITPNB-211ENST00000634017 CUL7Q14999 1698 aa32.29■■■□□ 2.76
PITPNB-211ENST00000634017 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
PITPNB-211ENST00000634017 IGF1RP08069 1367 aa32.24■■■□□ 2.75
PITPNB-211ENST00000634017 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
PITPNB-211ENST00000634017 CYB5RLQ6IPT4 315 aa32.13■■■□□ 2.73
PITPNB-211ENST00000634017 RUSC2Q8N2Y8 1516 aa32.12■■■□□ 2.73
PITPNB-211ENST00000634017 ERCC6L2Q5T890 1561 aa32.05■■■□□ 2.72
PITPNB-211ENST00000634017 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms