RNA–Protein interactions for RNA: ENST00000378438.9

ATP6AP2-201, Transcript of ATPase H+ transporting accessory protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATP6AP2, Length 2,022 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP2-201ENST00000378438 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
ATP6AP2-201ENST00000378438 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
ATP6AP2-201ENST00000378438 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
ATP6AP2-201ENST00000378438 DCAF1Q9Y4B6 1507 aa30.34■■■□□ 2.45
ATP6AP2-201ENST00000378438 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
ATP6AP2-201ENST00000378438 ABCC9O60706 1549 aa30.12■■■□□ 2.41
ATP6AP2-201ENST00000378438 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
ATP6AP2-201ENST00000378438 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
ATP6AP2-201ENST00000378438 NACADO15069 1562 aa29.71■■■□□ 2.35
ATP6AP2-201ENST00000378438 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
ATP6AP2-201ENST00000378438 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
ATP6AP2-201ENST00000378438 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
ATP6AP2-201ENST00000378438 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
ATP6AP2-201ENST00000378438 BICRAQ9NZM4 1560 aa28.61■■■□□ 2.17
ATP6AP2-201ENST00000378438 CECR2Q9BXF3 1484 aa28.54■■■□□ 2.16
ATP6AP2-201ENST00000378438 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
ATP6AP2-201ENST00000378438 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.14
ATP6AP2-201ENST00000378438 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
ATP6AP2-201ENST00000378438 BAZ1AQ9NRL2 1556 aaPredicted RBP28.32■■■□□ 2.12
ATP6AP2-201ENST00000378438 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
ATP6AP2-201ENST00000378438 WIZO95785 1651 aa28.19■■■□□ 2.1
ATP6AP2-201ENST00000378438 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
ATP6AP2-201ENST00000378438 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
ATP6AP2-201ENST00000378438 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
ATP6AP2-201ENST00000378438 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
ATP6AP2-201ENST00000378438 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.02
ATP6AP2-201ENST00000378438 SMARCA2P51531 1590 aa27.67■■■□□ 2.02
ATP6AP2-201ENST00000378438 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
ATP6AP2-201ENST00000378438 BAZ1BQ9UIG0 1483 aaKnown RBP27.54■■■□□ 2
ATP6AP2-201ENST00000378438 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
ATP6AP2-201ENST00000378438 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
ATP6AP2-201ENST00000378438 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
ATP6AP2-201ENST00000378438 TRIM41Q8WV44 630 aa27.14■■□□□ 1.93
ATP6AP2-201ENST00000378438 ABCC8Q09428 1581 aa27.08■■□□□ 1.92
ATP6AP2-201ENST00000378438 CFTRP13569 1480 aa26.86■■□□□ 1.89
ATP6AP2-201ENST00000378438 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.89
ATP6AP2-201ENST00000378438 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
ATP6AP2-201ENST00000378438 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
ATP6AP2-201ENST00000378438 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
ATP6AP2-201ENST00000378438 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
ATP6AP2-201ENST00000378438 FAM9AQ8IZU1 332 aaPredicted RBP26.68■■□□□ 1.86
ATP6AP2-201ENST00000378438 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
ATP6AP2-201ENST00000378438 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
ATP6AP2-201ENST00000378438 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
ATP6AP2-201ENST00000378438 SOGA1O94964 1423 aa26.55■■□□□ 1.84
ATP6AP2-201ENST00000378438 CUX1P39880 1505 aa26.54■■□□□ 1.84
ATP6AP2-201ENST00000378438 NESP48681 1621 aa26.51■■□□□ 1.83
ATP6AP2-201ENST00000378438 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
ATP6AP2-201ENST00000378438 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
ATP6AP2-201ENST00000378438 EEA1Q15075 1411 aa26.46■■□□□ 1.83
ATP6AP2-201ENST00000378438 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
ATP6AP2-201ENST00000378438 EHMT2Q96KQ7 1210 aa26.32■■□□□ 1.8
ATP6AP2-201ENST00000378438 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
ATP6AP2-201ENST00000378438 CEP164Q9UPV0 1460 aa26.26■■□□□ 1.79
ATP6AP2-201ENST00000378438 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
ATP6AP2-201ENST00000378438 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
ATP6AP2-201ENST00000378438 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
ATP6AP2-201ENST00000378438 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
ATP6AP2-201ENST00000378438 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
ATP6AP2-201ENST00000378438 KIF21BO75037 1637 aa26.18■■□□□ 1.78
ATP6AP2-201ENST00000378438 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
ATP6AP2-201ENST00000378438 GOLGA3Q08378 1498 aa26.14■■□□□ 1.77
ATP6AP2-201ENST00000378438 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
ATP6AP2-201ENST00000378438 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.76
ATP6AP2-201ENST00000378438 TNIKQ9UKE5 1360 aa26.06■■□□□ 1.76
ATP6AP2-201ENST00000378438 CUX2O14529 1486 aa26.05■■□□□ 1.76
ATP6AP2-201ENST00000378438 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
ATP6AP2-201ENST00000378438 PRXQ9BXM0 1461 aa26■■□□□ 1.75
ATP6AP2-201ENST00000378438 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
ATP6AP2-201ENST00000378438 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
ATP6AP2-201ENST00000378438 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
ATP6AP2-201ENST00000378438 UBTFP17480 764 aaKnown RBP25.97■■□□□ 1.75
ATP6AP2-201ENST00000378438 CEP162Q5TB80 1403 aa25.96■■□□□ 1.75
ATP6AP2-201ENST00000378438 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
ATP6AP2-201ENST00000378438 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
ATP6AP2-201ENST00000378438 IGF1RP08069 1367 aa25.88■■□□□ 1.73
ATP6AP2-201ENST00000378438 TARBP1Q13395 1621 aaKnown RBP25.82■■□□□ 1.72
ATP6AP2-201ENST00000378438 WDR62O43379 1518 aa25.82■■□□□ 1.72
ATP6AP2-201ENST00000378438 ABCA5Q8WWZ7 1642 aa25.8■■□□□ 1.72
ATP6AP2-201ENST00000378438 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
ATP6AP2-201ENST00000378438 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
ATP6AP2-201ENST00000378438 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
ATP6AP2-201ENST00000378438 CLIP1P30622 1438 aa25.72■■□□□ 1.71
ATP6AP2-201ENST00000378438 CUL7Q14999 1698 aa25.71■■□□□ 1.71
ATP6AP2-201ENST00000378438 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.7
ATP6AP2-201ENST00000378438 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
ATP6AP2-201ENST00000378438 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
ATP6AP2-201ENST00000378438 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
ATP6AP2-201ENST00000378438 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
ATP6AP2-201ENST00000378438 RANGAP1P46060 587 aaPredicted RBP25.54■■□□□ 1.68
ATP6AP2-201ENST00000378438 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
ATP6AP2-201ENST00000378438 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
ATP6AP2-201ENST00000378438 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
ATP6AP2-201ENST00000378438 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
ATP6AP2-201ENST00000378438 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
ATP6AP2-201ENST00000378438 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
ATP6AP2-201ENST00000378438 ARHGAP35Q9NRY4 1499 aa25.46■■□□□ 1.67
ATP6AP2-201ENST00000378438 EIF4G3O43432 1585 aaKnown RBP25.46■■□□□ 1.67
ATP6AP2-201ENST00000378438 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
ATP6AP2-201ENST00000378438 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms