RNA–Protein interactions for RNA: ENST00000357384.8

RPRD1A-201, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPRD1A, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-201ENST00000357384 NISCHQ9Y2I1 1504 aa43.98■■■■■ 4.63
RPRD1A-201ENST00000357384 CCDC180Q9P1Z9 1646 aa39.14■■■■□ 3.86
RPRD1A-201ENST00000357384 ABCC9O60706 1549 aa38.18■■■■□ 3.7
RPRD1A-201ENST00000357384 RB1CC1Q8TDY2 1594 aa36.76■■■■□ 3.48
RPRD1A-201ENST00000357384 DCAF8L2P0C7V8 631 aa36.73■■■■□ 3.47
RPRD1A-201ENST00000357384 NACADO15069 1562 aa36.69■■■■□ 3.46
RPRD1A-201ENST00000357384 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
RPRD1A-201ENST00000357384 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
RPRD1A-201ENST00000357384 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
RPRD1A-201ENST00000357384 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
RPRD1A-201ENST00000357384 SCRIBQ14160 1630 aa35.77■■■■□ 3.32
RPRD1A-201ENST00000357384 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
RPRD1A-201ENST00000357384 BICRAQ9NZM4 1560 aa35.63■■■■□ 3.29
RPRD1A-201ENST00000357384 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
RPRD1A-201ENST00000357384 DNAJC5BQ9UF47 199 aa34.82■■■■□ 3.17
RPRD1A-201ENST00000357384 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.15
RPRD1A-201ENST00000357384 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
RPRD1A-201ENST00000357384 CECR2Q9BXF3 1484 aa34.26■■■■□ 3.07
RPRD1A-201ENST00000357384 SMARCA4P51532 1647 aa34.17■■■■□ 3.06
RPRD1A-201ENST00000357384 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
RPRD1A-201ENST00000357384 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
RPRD1A-201ENST00000357384 SMARCA2P51531 1590 aa33.88■■■■□ 3.01
RPRD1A-201ENST00000357384 ATAD2BQ9ULI0 1458 aa33.87■■■■□ 3.01
RPRD1A-201ENST00000357384 NCAPD3P42695 1498 aa33.79■■■■□ 3
RPRD1A-201ENST00000357384 PEG3Q9GZU2 1588 aa33.76■■■■□ 3
RPRD1A-201ENST00000357384 HMGXB3Q12766 1538 aa33.72■■■□□ 2.99
RPRD1A-201ENST00000357384 BAZ1BQ9UIG0 1483 aaKnown RBP33.66■■■□□ 2.98
RPRD1A-201ENST00000357384 WIZO95785 1651 aa33.63■■■□□ 2.97
RPRD1A-201ENST00000357384 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.96
RPRD1A-201ENST00000357384 TOP2AP11388 1531 aaKnown RBP33.22■■■□□ 2.91
RPRD1A-201ENST00000357384 NESP48681 1621 aa33.06■■■□□ 2.88
RPRD1A-201ENST00000357384 LAMC3Q9Y6N6 1575 aa32.99■■■□□ 2.87
RPRD1A-201ENST00000357384 ERCC6Q03468 1493 aa32.92■■■□□ 2.86
RPRD1A-201ENST00000357384 CADPSQ9ULU8 1353 aa32.83■■■□□ 2.85
RPRD1A-201ENST00000357384 SUPT5HO00267 1087 aaKnown RBP32.8■■■□□ 2.84
RPRD1A-201ENST00000357384 CCDC88BA6NC98 1476 aa32.79■■■□□ 2.84
RPRD1A-201ENST00000357384 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
RPRD1A-201ENST00000357384 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.83
RPRD1A-201ENST00000357384 CFTRP13569 1480 aa32.67■■■□□ 2.82
RPRD1A-201ENST00000357384 PRDM2Q13029 1718 aa32.64■■■□□ 2.82
RPRD1A-201ENST00000357384 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
RPRD1A-201ENST00000357384 FANCD2Q9BXW9 1451 aa32.52■■■□□ 2.8
RPRD1A-201ENST00000357384 CEP164Q9UPV0 1460 aa32.5■■■□□ 2.79
RPRD1A-201ENST00000357384 CUX2O14529 1486 aa32.46■■■□□ 2.79
RPRD1A-201ENST00000357384 MRC2Q9UBG0 1479 aa32.41■■■□□ 2.78
RPRD1A-201ENST00000357384 WDR62O43379 1518 aa32.3■■■□□ 2.76
RPRD1A-201ENST00000357384 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
RPRD1A-201ENST00000357384 DNMBPQ6XZF7 1577 aa32.02■■■□□ 2.72
RPRD1A-201ENST00000357384 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
RPRD1A-201ENST00000357384 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
RPRD1A-201ENST00000357384 CUX1P39880 1505 aa31.82■■■□□ 2.68
RPRD1A-201ENST00000357384 IFT140Q96RY7 1462 aa31.76■■■□□ 2.67
RPRD1A-201ENST00000357384 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
RPRD1A-201ENST00000357384 FGD5Q6ZNL6 1462 aa31.71■■■□□ 2.67
RPRD1A-201ENST00000357384 TARBP1Q13395 1621 aaKnown RBP31.68■■■□□ 2.66
RPRD1A-201ENST00000357384 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
RPRD1A-201ENST00000357384 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
RPRD1A-201ENST00000357384 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
RPRD1A-201ENST00000357384 RAD54L2Q9Y4B4 1467 aa31.62■■■□□ 2.65
RPRD1A-201ENST00000357384 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
RPRD1A-201ENST00000357384 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
RPRD1A-201ENST00000357384 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
RPRD1A-201ENST00000357384 SOGA1O94964 1423 aa31.58■■■□□ 2.65
RPRD1A-201ENST00000357384 WDR97A6NE52 1622 aa31.52■■■□□ 2.64
RPRD1A-201ENST00000357384 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
RPRD1A-201ENST00000357384 TDRD9Q8NDG6 1382 aaKnown RBP31.41■■■□□ 2.62
RPRD1A-201ENST00000357384 ABCA10Q8WWZ4 1543 aa31.36■■■□□ 2.61
RPRD1A-201ENST00000357384 PBRM1Q86U86 1689 aa31.32■■■□□ 2.6
RPRD1A-201ENST00000357384 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
RPRD1A-201ENST00000357384 DNAJC5Q9H3Z4 198 aa31.26■■■□□ 2.59
RPRD1A-201ENST00000357384 GAPVD1Q14C86 1478 aa31.25■■■□□ 2.59
RPRD1A-201ENST00000357384 CHD1O14646 1710 aa31.24■■■□□ 2.59
RPRD1A-201ENST00000357384 GRIN2BQ13224 1484 aa31.22■■■□□ 2.59
RPRD1A-201ENST00000357384 SNAPC4Q5SXM2 1469 aa31.22■■■□□ 2.59
RPRD1A-201ENST00000357384 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.58
RPRD1A-201ENST00000357384 FBLN2P98095 1184 aa31.09■■■□□ 2.57
RPRD1A-201ENST00000357384 OSCARQ8IYS5 282 aa31.08■■■□□ 2.57
RPRD1A-201ENST00000357384 SYNJ2O15056 1496 aa31.01■■■□□ 2.56
RPRD1A-201ENST00000357384 ADAMTS12P58397 1594 aa31.01■■■□□ 2.55
RPRD1A-201ENST00000357384 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
RPRD1A-201ENST00000357384 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
RPRD1A-201ENST00000357384 KIF27Q86VH2 1401 aa30.95■■■□□ 2.55
RPRD1A-201ENST00000357384 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
RPRD1A-201ENST00000357384 FHAD1B1AJZ9 1412 aa30.87■■■□□ 2.53
RPRD1A-201ENST00000357384 GRIN2AQ12879 1464 aa30.85■■■□□ 2.53
RPRD1A-201ENST00000357384 CUL7Q14999 1698 aa30.82■■■□□ 2.52
RPRD1A-201ENST00000357384 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
RPRD1A-201ENST00000357384 IGF1RP08069 1367 aa30.75■■■□□ 2.51
RPRD1A-201ENST00000357384 RUSC2Q8N2Y8 1516 aa30.73■■■□□ 2.51
RPRD1A-201ENST00000357384 CEP170Q5SW79 1584 aa30.73■■■□□ 2.51
RPRD1A-201ENST00000357384 RIMBP3CA6NJZ7 1639 aa30.71■■■□□ 2.51
RPRD1A-201ENST00000357384 RIMBP3BA6NNM3 1639 aa30.71■■■□□ 2.51
RPRD1A-201ENST00000357384 RIMBP3Q9UFD9 1639 aa30.71■■■□□ 2.51
RPRD1A-201ENST00000357384 ARHGEF11O15085 1522 aa30.68■■■□□ 2.5
RPRD1A-201ENST00000357384 NUP160Q12769 1436 aa30.66■■■□□ 2.5
RPRD1A-201ENST00000357384 CARMIL1Q5VZK9 1371 aa30.61■■■□□ 2.49
RPRD1A-201ENST00000357384 CHIC1Q5VXU3 224 aa30.58■■■□□ 2.49
RPRD1A-201ENST00000357384 SHROOM2Q13796 1616 aa30.48■■■□□ 2.47
RPRD1A-201ENST00000357384 RAPGEF2Q9Y4G8 1499 aa30.47■■■□□ 2.47
RPRD1A-201ENST00000357384 ARAP1Q96P48 1450 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms