RNA–Protein interactions for RNA: ENST00000579565.5

MSL1-206, Transcript of male specific lethal 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-206ENST00000579565 NISCHQ9Y2I1 1504 aa42.7■■■■■ 4.43
MSL1-206ENST00000579565 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
MSL1-206ENST00000579565 ABCC9O60706 1549 aa36.83■■■■□ 3.49
MSL1-206ENST00000579565 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
MSL1-206ENST00000579565 ZCCHC6Q5VYS8 1495 aaKnown RBP35.64■■■■□ 3.3
MSL1-206ENST00000579565 RB1CC1Q8TDY2 1594 aa35.54■■■■□ 3.28
MSL1-206ENST00000579565 NACADO15069 1562 aa35.53■■■■□ 3.28
MSL1-206ENST00000579565 MYO15BQ96JP2 1530 aa35.36■■■■□ 3.25
MSL1-206ENST00000579565 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.25
MSL1-206ENST00000579565 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
MSL1-206ENST00000579565 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
MSL1-206ENST00000579565 PABPN1Q86U42 306 aaKnown RBP eCLIP34.44■■■■□ 3.1
MSL1-206ENST00000579565 BICRAQ9NZM4 1560 aa34.39■■■■□ 3.1
MSL1-206ENST00000579565 SHROOM4Q9ULL8 1493 aa34.08■■■■□ 3.05
MSL1-206ENST00000579565 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.95
MSL1-206ENST00000579565 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
MSL1-206ENST00000579565 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
MSL1-206ENST00000579565 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
MSL1-206ENST00000579565 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
MSL1-206ENST00000579565 SMARCA4P51532 1647 aa33.11■■■□□ 2.89
MSL1-206ENST00000579565 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
MSL1-206ENST00000579565 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
MSL1-206ENST00000579565 ATAD2BQ9ULI0 1458 aa32.83■■■□□ 2.85
MSL1-206ENST00000579565 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
MSL1-206ENST00000579565 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
MSL1-206ENST00000579565 HMGXB3Q12766 1538 aa32.66■■■□□ 2.82
MSL1-206ENST00000579565 BAZ1BQ9UIG0 1483 aaKnown RBP32.63■■■□□ 2.81
MSL1-206ENST00000579565 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
MSL1-206ENST00000579565 WIZO95785 1651 aa32.6■■■□□ 2.81
MSL1-206ENST00000579565 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
MSL1-206ENST00000579565 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
MSL1-206ENST00000579565 NESP48681 1621 aa31.92■■■□□ 2.7
MSL1-206ENST00000579565 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
MSL1-206ENST00000579565 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
MSL1-206ENST00000579565 CADPSQ9ULU8 1353 aa31.83■■■□□ 2.69
MSL1-206ENST00000579565 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
MSL1-206ENST00000579565 CFTRP13569 1480 aa31.69■■■□□ 2.66
MSL1-206ENST00000579565 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
MSL1-206ENST00000579565 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.65
MSL1-206ENST00000579565 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
MSL1-206ENST00000579565 FANCD2Q9BXW9 1451 aa31.5■■■□□ 2.63
MSL1-206ENST00000579565 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.63
MSL1-206ENST00000579565 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.62
MSL1-206ENST00000579565 MRC2Q9UBG0 1479 aa31.35■■■□□ 2.61
MSL1-206ENST00000579565 CUX2O14529 1486 aa31.28■■■□□ 2.6
MSL1-206ENST00000579565 WDR62O43379 1518 aa31.22■■■□□ 2.59
MSL1-206ENST00000579565 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
MSL1-206ENST00000579565 ABCC8Q09428 1581 aa31.02■■■□□ 2.56
MSL1-206ENST00000579565 DNMBPQ6XZF7 1577 aa31.02■■■□□ 2.56
MSL1-206ENST00000579565 TOPBP1Q92547 1522 aa31.01■■■□□ 2.56
MSL1-206ENST00000579565 CUX1P39880 1505 aa30.87■■■□□ 2.53
MSL1-206ENST00000579565 WRNQ14191 1432 aaPredicted RBP eCLIP30.8■■■□□ 2.52
MSL1-206ENST00000579565 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
MSL1-206ENST00000579565 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
MSL1-206ENST00000579565 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
MSL1-206ENST00000579565 SYNJ1O43426 1573 aa30.7■■■□□ 2.51
MSL1-206ENST00000579565 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
MSL1-206ENST00000579565 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
MSL1-206ENST00000579565 SOGA1O94964 1423 aa30.65■■■□□ 2.5
MSL1-206ENST00000579565 TARBP1Q13395 1621 aaKnown RBP30.64■■■□□ 2.49
MSL1-206ENST00000579565 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.49
MSL1-206ENST00000579565 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
MSL1-206ENST00000579565 EIF4G3O43432 1585 aaKnown RBP30.52■■■□□ 2.48
MSL1-206ENST00000579565 WDR97A6NE52 1622 aa30.47■■■□□ 2.47
MSL1-206ENST00000579565 AQRO60306 1485 aaKnown RBP eCLIP30.46■■■□□ 2.477e-9■■■■□ 25.6
MSL1-206ENST00000579565 TDRD9Q8NDG6 1382 aaKnown RBP30.45■■■□□ 2.46
MSL1-206ENST00000579565 ABCA10Q8WWZ4 1543 aa30.44■■■□□ 2.46
MSL1-206ENST00000579565 ABCA5Q8WWZ7 1642 aa30.31■■■□□ 2.44
MSL1-206ENST00000579565 GAPVD1Q14C86 1478 aa30.31■■■□□ 2.44
MSL1-206ENST00000579565 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
MSL1-206ENST00000579565 TRIM41Q8WV44 630 aa30.27■■■□□ 2.44
MSL1-206ENST00000579565 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
MSL1-206ENST00000579565 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
MSL1-206ENST00000579565 MAGI1Q96QZ7 1491 aaPredicted RBP30.16■■■□□ 2.42
MSL1-206ENST00000579565 KIF27Q86VH2 1401 aa30.14■■■□□ 2.42
MSL1-206ENST00000579565 FBLN2P98095 1184 aa30.09■■■□□ 2.41
MSL1-206ENST00000579565 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
MSL1-206ENST00000579565 CHD1O14646 1710 aa30.08■■■□□ 2.41
MSL1-206ENST00000579565 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
MSL1-206ENST00000579565 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
MSL1-206ENST00000579565 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
MSL1-206ENST00000579565 CHMP7Q8WUX9 453 aaPredicted RBP30.02■■■□□ 2.4
MSL1-206ENST00000579565 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
MSL1-206ENST00000579565 FHAD1B1AJZ9 1412 aa29.96■■■□□ 2.39
MSL1-206ENST00000579565 DNAJC5Q9H3Z4 198 aa29.95■■■□□ 2.38
MSL1-206ENST00000579565 IGF1RP08069 1367 aa29.92■■■□□ 2.38
MSL1-206ENST00000579565 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
MSL1-206ENST00000579565 CUL7Q14999 1698 aa29.9■■■□□ 2.38
MSL1-206ENST00000579565 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
MSL1-206ENST00000579565 CARMIL1Q5VZK9 1371 aa29.79■■■□□ 2.36
MSL1-206ENST00000579565 EEA1Q15075 1411 aa29.73■■■□□ 2.35
MSL1-206ENST00000579565 CLASP1Q7Z460 1538 aa29.73■■■□□ 2.35
MSL1-206ENST00000579565 CEP170Q5SW79 1584 aa29.72■■■□□ 2.35
MSL1-206ENST00000579565 NUP160Q12769 1436 aa29.71■■■□□ 2.35
MSL1-206ENST00000579565 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
MSL1-206ENST00000579565 RAPGEF2Q9Y4G8 1499 aa29.66■■■□□ 2.34
MSL1-206ENST00000579565 CSRNP3Q8WYN3 585 aa29.62■■■□□ 2.33
MSL1-206ENST00000579565 PRXQ9BXM0 1461 aa29.58■■■□□ 2.33
MSL1-206ENST00000579565 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
MSL1-206ENST00000579565 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms