RNA–Protein interactions for RNA: ENST00000449337.6

RORA-204, Transcript of RAR related orphan receptor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RORA, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-204ENST00000449337 NISCHQ9Y2I1 1504 aa49.25■■■■■ 5.47
RORA-204ENST00000449337 CCDC180Q9P1Z9 1646 aa44.05■■■■■ 4.64
RORA-204ENST00000449337 ABCC9O60706 1549 aa43.83■■■■■ 4.61
RORA-204ENST00000449337 RB1CC1Q8TDY2 1594 aa41.78■■■■■ 4.28
RORA-204ENST00000449337 NACADO15069 1562 aa41.56■■■■■ 4.24
RORA-204ENST00000449337 DCAF8L2P0C7V8 631 aa41.45■■■■■ 4.23
RORA-204ENST00000449337 MYO15BQ96JP2 1530 aa41.05■■■■■ 4.16
RORA-204ENST00000449337 UNC13AQ9UPW8 1703 aa40.95■■■■■ 4.15
RORA-204ENST00000449337 DNAJC5BQ9UF47 199 aa40.89■■■■■ 4.14
RORA-204ENST00000449337 ZCCHC6Q5VYS8 1495 aaKnown RBP40.88■■■■■ 4.13
RORA-204ENST00000449337 PABPN1Q86U42 306 aaKnown RBP eCLIP40.85■■■■■ 4.13
RORA-204ENST00000449337 DCAF1Q9Y4B6 1507 aa40.65■■■■■ 4.1
RORA-204ENST00000449337 BICRAQ9NZM4 1560 aa40.63■■■■■ 4.09
RORA-204ENST00000449337 SCRIBQ14160 1630 aa40.22■■■■■ 4.03
RORA-204ENST00000449337 SHROOM4Q9ULL8 1493 aa39.98■■■■□ 3.99
RORA-204ENST00000449337 CC2D2AQ9P2K1 1620 aa39.6■■■■□ 3.93
RORA-204ENST00000449337 EIF4G1Q04637 1599 aaKnown RBP39.57■■■■□ 3.93
RORA-204ENST00000449337 CECR2Q9BXF3 1484 aa39.41■■■■□ 3.9
RORA-204ENST00000449337 SMARCA4P51532 1647 aa38.37■■■■□ 3.73
RORA-204ENST00000449337 NCAPD3P42695 1498 aa38.37■■■■□ 3.73
RORA-204ENST00000449337 ATAD2BQ9ULI0 1458 aa38.32■■■■□ 3.73
RORA-204ENST00000449337 SMARCA2P51531 1590 aa38.2■■■■□ 3.71
RORA-204ENST00000449337 BAZ1AQ9NRL2 1556 aaPredicted RBP38.18■■■■□ 3.7
RORA-204ENST00000449337 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
RORA-204ENST00000449337 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
RORA-204ENST00000449337 PEG3Q9GZU2 1588 aa37.97■■■■□ 3.67
RORA-204ENST00000449337 BAZ1BQ9UIG0 1483 aaKnown RBP37.96■■■■□ 3.67
RORA-204ENST00000449337 ERCC6Q03468 1493 aa37.77■■■■□ 3.64
RORA-204ENST00000449337 NESP48681 1621 aa37.76■■■■□ 3.64
RORA-204ENST00000449337 CUX2O14529 1486 aa37.57■■■■□ 3.61
RORA-204ENST00000449337 WIZO95785 1651 aa37.57■■■■□ 3.6
RORA-204ENST00000449337 LAMC3Q9Y6N6 1575 aa37.46■■■■□ 3.59
RORA-204ENST00000449337 THOC2Q8NI27 1593 aaKnown RBP37.29■■■■□ 3.56
RORA-204ENST00000449337 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
RORA-204ENST00000449337 RSF1Q96T23 1441 aaPredicted RBP37.28■■■■□ 3.56
RORA-204ENST00000449337 DNAJC5Q9H3Z4 198 aa37.25■■■■□ 3.55
RORA-204ENST00000449337 CADPSQ9ULU8 1353 aa37.22■■■■□ 3.55
RORA-204ENST00000449337 PDS5BQ9NTI5 1447 aa37.21■■■■□ 3.55
RORA-204ENST00000449337 TOP2AP11388 1531 aaKnown RBP37.06■■■■□ 3.52
RORA-204ENST00000449337 MRC2Q9UBG0 1479 aa36.91■■■■□ 3.5
RORA-204ENST00000449337 CFTRP13569 1480 aa36.87■■■■□ 3.49
RORA-204ENST00000449337 WDR62O43379 1518 aa36.82■■■■□ 3.48
RORA-204ENST00000449337 FANCD2Q9BXW9 1451 aa36.81■■■■□ 3.48
RORA-204ENST00000449337 CEP164Q9UPV0 1460 aa36.81■■■■□ 3.48
RORA-204ENST00000449337 CCDC88BA6NC98 1476 aa36.65■■■■□ 3.46
RORA-204ENST00000449337 PRDM2Q13029 1718 aa36.56■■■■□ 3.44
RORA-204ENST00000449337 URB2Q14146 1524 aaKnown RBP36.53■■■■□ 3.44
RORA-204ENST00000449337 TOPBP1Q92547 1522 aa36.16■■■■□ 3.38
RORA-204ENST00000449337 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
RORA-204ENST00000449337 ZNF608Q9ULD9 1512 aaPredicted RBP36.05■■■■□ 3.36
RORA-204ENST00000449337 DNMBPQ6XZF7 1577 aa36.04■■■■□ 3.36
RORA-204ENST00000449337 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
RORA-204ENST00000449337 OSCARQ8IYS5 282 aa35.91■■■■□ 3.34
RORA-204ENST00000449337 SUPT5HO00267 1087 aaKnown RBP35.86■■■■□ 3.33
RORA-204ENST00000449337 EIF4G3O43432 1585 aaKnown RBP35.85■■■■□ 3.33
RORA-204ENST00000449337 TARBP1Q13395 1621 aaKnown RBP35.84■■■■□ 3.33
RORA-204ENST00000449337 POLA1P09884 1462 aaPredicted RBP35.82■■■■□ 3.32
RORA-204ENST00000449337 TRIM41Q8WV44 630 aa35.78■■■■□ 3.32
RORA-204ENST00000449337 AQRO60306 1485 aaKnown RBP eCLIP35.74■■■■□ 3.311e-6■□□□□ 10.6
RORA-204ENST00000449337 RAD54L2Q9Y4B4 1467 aa35.71■■■■□ 3.31
RORA-204ENST00000449337 CUX1P39880 1505 aa35.67■■■■□ 3.3
RORA-204ENST00000449337 FGD5Q6ZNL6 1462 aa35.64■■■■□ 3.3
RORA-204ENST00000449337 SOGA1O94964 1423 aa35.63■■■■□ 3.29
RORA-204ENST00000449337 TDRD9Q8NDG6 1382 aaKnown RBP35.56■■■■□ 3.28
RORA-204ENST00000449337 CHD1O14646 1710 aa35.55■■■■□ 3.28
RORA-204ENST00000449337 RIMBP3CA6NJZ7 1639 aa35.49■■■■□ 3.27
RORA-204ENST00000449337 RIMBP3BA6NNM3 1639 aa35.49■■■■□ 3.27
RORA-204ENST00000449337 RIMBP3Q9UFD9 1639 aa35.49■■■■□ 3.27
RORA-204ENST00000449337 FBLN2P98095 1184 aa35.42■■■■□ 3.26
RORA-204ENST00000449337 WDR97A6NE52 1622 aa35.4■■■■□ 3.26
RORA-204ENST00000449337 ARHGEF11O15085 1522 aa35.38■■■■□ 3.26
RORA-204ENST00000449337 SNAPC4Q5SXM2 1469 aa35.37■■■■□ 3.25
RORA-204ENST00000449337 GRIN2BQ13224 1484 aa35.28■■■■□ 3.24
RORA-204ENST00000449337 MAGI1Q96QZ7 1491 aaPredicted RBP35.24■■■■□ 3.23
RORA-204ENST00000449337 PBRM1Q86U86 1689 aa35.23■■■■□ 3.23
RORA-204ENST00000449337 ABCA10Q8WWZ4 1543 aa35.22■■■■□ 3.23
RORA-204ENST00000449337 GAPVD1Q14C86 1478 aa35.21■■■■□ 3.23
RORA-204ENST00000449337 ABCA5Q8WWZ7 1642 aa35.18■■■■□ 3.22
RORA-204ENST00000449337 CHMP7Q8WUX9 453 aaPredicted RBP35.17■■■■□ 3.22
RORA-204ENST00000449337 BIVM-ERCC5R4GMW8 1640 aa35.16■■■■□ 3.22
RORA-204ENST00000449337 SYNJ1O43426 1573 aa35.16■■■■□ 3.22
RORA-204ENST00000449337 TOP2BQ02880 1626 aa35.15■■■■□ 3.22
RORA-204ENST00000449337 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.22
RORA-204ENST00000449337 SYNJ2O15056 1496 aa35.14■■■■□ 3.22
RORA-204ENST00000449337 CLASP1Q7Z460 1538 aa35.11■■■■□ 3.21
RORA-204ENST00000449337 CYB5RLQ6IPT4 315 aa35.09■■■■□ 3.21
RORA-204ENST00000449337 ARAP1Q96P48 1450 aa35.07■■■■□ 3.2
RORA-204ENST00000449337 ADAMTS12P58397 1594 aa34.89■■■■□ 3.18
RORA-204ENST00000449337 GRIN2AQ12879 1464 aa34.85■■■■□ 3.17
RORA-204ENST00000449337 ERICH3Q5RHP9 1530 aa34.77■■■■□ 3.16
RORA-204ENST00000449337 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
RORA-204ENST00000449337 CEP170Q5SW79 1584 aa34.75■■■■□ 3.15
RORA-204ENST00000449337 NUP160Q12769 1436 aa34.71■■■■□ 3.15
RORA-204ENST00000449337 ERCC6L2Q5T890 1561 aa34.65■■■■□ 3.14
RORA-204ENST00000449337 TRHP20396 242 aaPredicted RBP34.59■■■■□ 3.13
RORA-204ENST00000449337 SHROOM2Q13796 1616 aa34.55■■■■□ 3.12
RORA-204ENST00000449337 KIF27Q86VH2 1401 aa34.43■■■■□ 3.1
RORA-204ENST00000449337 IGF1RP08069 1367 aa34.42■■■■□ 3.1
RORA-204ENST00000449337 RUSC2Q8N2Y8 1516 aa34.4■■■■□ 3.1
RORA-204ENST00000449337 PRG4Q92954 1404 aaPredicted RBP34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms