RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 NISCHQ9Y2I1 1504 aa37.47■■■■□ 3.59
C9orf78-201ENST00000372447 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
C9orf78-201ENST00000372447 ABCC9O60706 1549 aa32.02■■■□□ 2.72
C9orf78-201ENST00000372447 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
C9orf78-201ENST00000372447 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
C9orf78-201ENST00000372447 NACADO15069 1562 aa30.99■■■□□ 2.55
C9orf78-201ENST00000372447 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
C9orf78-201ENST00000372447 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.54
C9orf78-201ENST00000372447 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
C9orf78-201ENST00000372447 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
C9orf78-201ENST00000372447 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
C9orf78-201ENST00000372447 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
C9orf78-201ENST00000372447 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
C9orf78-201ENST00000372447 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.38
C9orf78-201ENST00000372447 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
C9orf78-201ENST00000372447 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
C9orf78-201ENST00000372447 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
C9orf78-201ENST00000372447 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
C9orf78-201ENST00000372447 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
C9orf78-201ENST00000372447 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
C9orf78-201ENST00000372447 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
C9orf78-201ENST00000372447 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
C9orf78-201ENST00000372447 ATAD2BQ9ULI0 1458 aa28.73■■■□□ 2.19
C9orf78-201ENST00000372447 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
C9orf78-201ENST00000372447 PEG3Q9GZU2 1588 aa28.66■■■□□ 2.18
C9orf78-201ENST00000372447 NCAPD3P42695 1498 aa28.64■■■□□ 2.18
C9orf78-201ENST00000372447 WIZO95785 1651 aa28.6■■■□□ 2.17
C9orf78-201ENST00000372447 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
C9orf78-201ENST00000372447 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
C9orf78-201ENST00000372447 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
C9orf78-201ENST00000372447 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
C9orf78-201ENST00000372447 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
C9orf78-201ENST00000372447 NESP48681 1621 aa27.85■■■□□ 2.05
C9orf78-201ENST00000372447 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
C9orf78-201ENST00000372447 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
C9orf78-201ENST00000372447 CFTRP13569 1480 aa27.76■■■□□ 2.03
C9orf78-201ENST00000372447 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
C9orf78-201ENST00000372447 ERCC6Q03468 1493 aa27.54■■■□□ 2
C9orf78-201ENST00000372447 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
C9orf78-201ENST00000372447 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
C9orf78-201ENST00000372447 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
C9orf78-201ENST00000372447 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
C9orf78-201ENST00000372447 MRC2Q9UBG0 1479 aa27.28■■□□□ 1.96
C9orf78-201ENST00000372447 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
C9orf78-201ENST00000372447 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
C9orf78-201ENST00000372447 WDR62O43379 1518 aa27.16■■□□□ 1.94
C9orf78-201ENST00000372447 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
C9orf78-201ENST00000372447 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
C9orf78-201ENST00000372447 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
C9orf78-201ENST00000372447 CUX1P39880 1505 aa27.08■■□□□ 1.93
C9orf78-201ENST00000372447 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
C9orf78-201ENST00000372447 CUX2O14529 1486 aa27.05■■□□□ 1.92
C9orf78-201ENST00000372447 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
C9orf78-201ENST00000372447 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
C9orf78-201ENST00000372447 TOP2BQ02880 1626 aa26.93■■□□□ 1.9
C9orf78-201ENST00000372447 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
C9orf78-201ENST00000372447 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
C9orf78-201ENST00000372447 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
C9orf78-201ENST00000372447 SOGA1O94964 1423 aa26.84■■□□□ 1.89
C9orf78-201ENST00000372447 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
C9orf78-201ENST00000372447 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
C9orf78-201ENST00000372447 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
C9orf78-201ENST00000372447 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
C9orf78-201ENST00000372447 ZNF608Q9ULD9 1512 aaPredicted RBP26.71■■□□□ 1.87
C9orf78-201ENST00000372447 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
C9orf78-201ENST00000372447 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
C9orf78-201ENST00000372447 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.854e-8■■■■□ 22.6
C9orf78-201ENST00000372447 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
C9orf78-201ENST00000372447 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
C9orf78-201ENST00000372447 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
C9orf78-201ENST00000372447 ABCA5Q8WWZ7 1642 aa26.49■■□□□ 1.83
C9orf78-201ENST00000372447 KIF27Q86VH2 1401 aa26.47■■□□□ 1.83
C9orf78-201ENST00000372447 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
C9orf78-201ENST00000372447 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
C9orf78-201ENST00000372447 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
C9orf78-201ENST00000372447 IGF1RP08069 1367 aa26.36■■□□□ 1.81
C9orf78-201ENST00000372447 SNAPC4Q5SXM2 1469 aa26.35■■□□□ 1.81
C9orf78-201ENST00000372447 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
C9orf78-201ENST00000372447 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
C9orf78-201ENST00000372447 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
C9orf78-201ENST00000372447 FBLN2P98095 1184 aa26.25■■□□□ 1.79
C9orf78-201ENST00000372447 CHMP7Q8WUX9 453 aaPredicted RBP26.23■■□□□ 1.79
C9orf78-201ENST00000372447 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
C9orf78-201ENST00000372447 EEA1Q15075 1411 aa26.22■■□□□ 1.79
C9orf78-201ENST00000372447 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
C9orf78-201ENST00000372447 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
C9orf78-201ENST00000372447 ADAMTS12P58397 1594 aa26.21■■□□□ 1.79
C9orf78-201ENST00000372447 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
C9orf78-201ENST00000372447 CUL7Q14999 1698 aa26.15■■□□□ 1.78
C9orf78-201ENST00000372447 CHD1O14646 1710 aa26.13■■□□□ 1.77
C9orf78-201ENST00000372447 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
C9orf78-201ENST00000372447 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
C9orf78-201ENST00000372447 PRXQ9BXM0 1461 aa26.08■■□□□ 1.77
C9orf78-201ENST00000372447 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
C9orf78-201ENST00000372447 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
C9orf78-201ENST00000372447 NUP160Q12769 1436 aa25.97■■□□□ 1.75
C9orf78-201ENST00000372447 CEP170Q5SW79 1584 aa25.95■■□□□ 1.75
C9orf78-201ENST00000372447 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
C9orf78-201ENST00000372447 KIF21BO75037 1637 aa25.9■■□□□ 1.74
C9orf78-201ENST00000372447 CLASP1Q7Z460 1538 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms