Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
ARHGEF40Q8TER5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
ARHGEF40Q8TER5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC35.86■■■■□ 3.33
ARHGEF40Q8TER5 AL136967.2-201ENST00000623968 743 ntBASIC35.86■■■■□ 3.33
ARHGEF40Q8TER5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
ARHGEF40Q8TER5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.85■■■■□ 3.33
ARHGEF40Q8TER5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC35.85■■■■□ 3.33
ARHGEF40Q8TER5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC35.85■■■■□ 3.33
ARHGEF40Q8TER5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
ARHGEF40Q8TER5 GRAMD4P4-201ENST00000613563 1115 ntBASIC35.85■■■■□ 3.33
ARHGEF40Q8TER5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
ARHGEF40Q8TER5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
ARHGEF40Q8TER5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
ARHGEF40Q8TER5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
ARHGEF40Q8TER5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC35.83■■■■□ 3.33
ARHGEF40Q8TER5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
ARHGEF40Q8TER5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
ARHGEF40Q8TER5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC35.83■■■■□ 3.33
ARHGEF40Q8TER5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC35.82■■■■□ 3.33
ARHGEF40Q8TER5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
ARHGEF40Q8TER5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC35.82■■■■□ 3.32
ARHGEF40Q8TER5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC35.82■■■■□ 3.32
ARHGEF40Q8TER5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.32
ARHGEF40Q8TER5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
ARHGEF40Q8TER5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
ARHGEF40Q8TER5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC35.81■■■■□ 3.32
ARHGEF40Q8TER5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
ARHGEF40Q8TER5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
ARHGEF40Q8TER5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC35.8■■■■□ 3.32
ARHGEF40Q8TER5 AC090192.1-201ENST00000517740 490 ntBASIC35.8■■■■□ 3.32
ARHGEF40Q8TER5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC35.8■■■■□ 3.32
ARHGEF40Q8TER5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC35.8■■■■□ 3.32
ARHGEF40Q8TER5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
ARHGEF40Q8TER5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
ARHGEF40Q8TER5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
ARHGEF40Q8TER5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC35.78■■■■□ 3.32
ARHGEF40Q8TER5 SRD5A1P1-201ENST00000442297 786 ntBASIC35.78■■■■□ 3.32
ARHGEF40Q8TER5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC35.78■■■■□ 3.32
ARHGEF40Q8TER5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
ARHGEF40Q8TER5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC35.78■■■■□ 3.32
ARHGEF40Q8TER5 AC091305.1-201ENST00000479476 895 ntBASIC35.78■■■■□ 3.32
ARHGEF40Q8TER5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
ARHGEF40Q8TER5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC35.77■■■■□ 3.32
ARHGEF40Q8TER5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
ARHGEF40Q8TER5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.31
ARHGEF40Q8TER5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.75■■■■□ 3.31
ARHGEF40Q8TER5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
ARHGEF40Q8TER5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.74■■■■□ 3.31
ARHGEF40Q8TER5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC35.74■■■■□ 3.31
ARHGEF40Q8TER5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
ARHGEF40Q8TER5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC35.74■■■■□ 3.31
ARHGEF40Q8TER5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
ARHGEF40Q8TER5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
ARHGEF40Q8TER5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
ARHGEF40Q8TER5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
ARHGEF40Q8TER5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC35.73■■■■□ 3.31
ARHGEF40Q8TER5 RARRES2P11-201ENST00000635158 484 ntBASIC35.72■■■■□ 3.31
ARHGEF40Q8TER5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
ARHGEF40Q8TER5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
ARHGEF40Q8TER5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.71■■■■□ 3.31
ARHGEF40Q8TER5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC35.71■■■■□ 3.31
ARHGEF40Q8TER5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC35.71■■■■□ 3.31
ARHGEF40Q8TER5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
ARHGEF40Q8TER5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC35.7■■■■□ 3.31
ARHGEF40Q8TER5 MIR6722-201ENST00000617286 78 ntBASIC35.7■■■■□ 3.31
ARHGEF40Q8TER5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
ARHGEF40Q8TER5 SF1-220ENST00000626028 704 ntTSL 2 BASIC35.7■■■■□ 3.31
ARHGEF40Q8TER5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC35.69■■■■□ 3.3
ARHGEF40Q8TER5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
ARHGEF40Q8TER5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC35.68■■■■□ 3.3
ARHGEF40Q8TER5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
ARHGEF40Q8TER5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC35.67■■■■□ 3.3
ARHGEF40Q8TER5 BX255925.1-201ENST00000566954 1854 ntBASIC35.67■■■■□ 3.3
ARHGEF40Q8TER5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC35.67■■■■□ 3.3
ARHGEF40Q8TER5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
ARHGEF40Q8TER5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.66■■■■□ 3.3
ARHGEF40Q8TER5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
ARHGEF40Q8TER5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
ARHGEF40Q8TER5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC35.64■■■■□ 3.3
ARHGEF40Q8TER5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
ARHGEF40Q8TER5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
ARHGEF40Q8TER5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC35.63■■■■□ 3.29
ARHGEF40Q8TER5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
ARHGEF40Q8TER5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC35.63■■■■□ 3.29
ARHGEF40Q8TER5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC35.62■■■■□ 3.29
ARHGEF40Q8TER5 CA15P2-201ENST00000611168 834 ntBASIC35.62■■■■□ 3.29
ARHGEF40Q8TER5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
ARHGEF40Q8TER5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC35.62■■■■□ 3.29
ARHGEF40Q8TER5 MIR4767-201ENST00000582827 78 ntBASIC35.62■■■■□ 3.29
ARHGEF40Q8TER5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC35.61■■■■□ 3.29
ARHGEF40Q8TER5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
ARHGEF40Q8TER5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
ARHGEF40Q8TER5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
ARHGEF40Q8TER5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
ARHGEF40Q8TER5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
ARHGEF40Q8TER5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC35.6■■■■□ 3.29
ARHGEF40Q8TER5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
ARHGEF40Q8TER5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC35.6■■■■□ 3.29
ARHGEF40Q8TER5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC35.6■■■■□ 3.29
ARHGEF40Q8TER5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC35.6■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms