RNA–Protein interactions for RNA: ENST00000531296.1

FRMD8-208, Transcript of FERM domain containing 8, humanhuman

TSL 1 (best) BASIC

Gene FRMD8, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD8-208ENST00000531296 NISCHQ9Y2I1 1504 aa54.21■■■■■ 6.27
FRMD8-208ENST00000531296 CCDC180Q9P1Z9 1646 aa48.6■■■■■ 5.37
FRMD8-208ENST00000531296 ABCC9O60706 1549 aa48.44■■■■■ 5.35
FRMD8-208ENST00000531296 RB1CC1Q8TDY2 1594 aa46.14■■■■■ 4.98
FRMD8-208ENST00000531296 NACADO15069 1562 aa45.88■■■■■ 4.93
FRMD8-208ENST00000531296 DCAF8L2P0C7V8 631 aa45.5■■■■■ 4.87
FRMD8-208ENST00000531296 DNAJC5BQ9UF47 199 aa45.37■■■■■ 4.85
FRMD8-208ENST00000531296 MYO15BQ96JP2 1530 aa45.31■■■■■ 4.84
FRMD8-208ENST00000531296 UNC13AQ9UPW8 1703 aa45.23■■■■■ 4.83
FRMD8-208ENST00000531296 PABPN1Q86U42 306 aaKnown RBP eCLIP45.08■■■■■ 4.81
FRMD8-208ENST00000531296 ZCCHC6Q5VYS8 1495 aaKnown RBP44.99■■■■■ 4.79
FRMD8-208ENST00000531296 BICRAQ9NZM4 1560 aa44.92■■■■■ 4.78
FRMD8-208ENST00000531296 DCAF1Q9Y4B6 1507 aa44.79■■■■■ 4.76
FRMD8-208ENST00000531296 SCRIBQ14160 1630 aa44.29■■■■■ 4.68
FRMD8-208ENST00000531296 SHROOM4Q9ULL8 1493 aa44.22■■■■■ 4.67
FRMD8-208ENST00000531296 CC2D2AQ9P2K1 1620 aa43.8■■■■■ 4.6
FRMD8-208ENST00000531296 EIF4G1Q04637 1599 aaKnown RBP43.75■■■■■ 4.59
FRMD8-208ENST00000531296 CECR2Q9BXF3 1484 aa43.61■■■■■ 4.57
FRMD8-208ENST00000531296 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
FRMD8-208ENST00000531296 SMARCA4P51532 1647 aa42.28■■■■■ 4.36
FRMD8-208ENST00000531296 ATAD2BQ9ULI0 1458 aa42.27■■■■■ 4.36
FRMD8-208ENST00000531296 SMARCA2P51531 1590 aa42.12■■■■■ 4.33
FRMD8-208ENST00000531296 HMGXB3Q12766 1538 aa42.09■■■■■ 4.33
FRMD8-208ENST00000531296 BAZ1AQ9NRL2 1556 aaPredicted RBP42.04■■■■■ 4.32
FRMD8-208ENST00000531296 PEG3Q9GZU2 1588 aa41.89■■■■■ 4.3
FRMD8-208ENST00000531296 BAZ1BQ9UIG0 1483 aaKnown RBP41.83■■■■■ 4.29
FRMD8-208ENST00000531296 MROH2BQ7Z745 1585 aa41.8■■■■■ 4.28
FRMD8-208ENST00000531296 ERCC6Q03468 1493 aa41.74■■■■■ 4.27
FRMD8-208ENST00000531296 NESP48681 1621 aa41.69■■■■■ 4.27
FRMD8-208ENST00000531296 CUX2O14529 1486 aa41.67■■■■■ 4.26
FRMD8-208ENST00000531296 DNAJC5Q9H3Z4 198 aa41.47■■■■■ 4.23
FRMD8-208ENST00000531296 LAMC3Q9Y6N6 1575 aa41.37■■■■■ 4.21
FRMD8-208ENST00000531296 WIZO95785 1651 aa41.3■■■■■ 4.2
FRMD8-208ENST00000531296 THOC2Q8NI27 1593 aaKnown RBP41.29■■■■■ 4.2
FRMD8-208ENST00000531296 KIF21AQ7Z4S6 1674 aa41.19■■■■■ 4.18
FRMD8-208ENST00000531296 PDS5BQ9NTI5 1447 aa41.07■■■■■ 4.16
FRMD8-208ENST00000531296 CADPSQ9ULU8 1353 aa41.04■■■■■ 4.16
FRMD8-208ENST00000531296 RSF1Q96T23 1441 aaPredicted RBP40.95■■■■■ 4.15
FRMD8-208ENST00000531296 TOP2AP11388 1531 aaKnown RBP40.77■■■■■ 4.12
FRMD8-208ENST00000531296 MRC2Q9UBG0 1479 aa40.77■■■■■ 4.12
FRMD8-208ENST00000531296 WDR62O43379 1518 aa40.72■■■■■ 4.11
FRMD8-208ENST00000531296 CFTRP13569 1480 aa40.65■■■■■ 4.1
FRMD8-208ENST00000531296 CEP164Q9UPV0 1460 aa40.62■■■■■ 4.09
FRMD8-208ENST00000531296 FANCD2Q9BXW9 1451 aa40.6■■■■■ 4.09
FRMD8-208ENST00000531296 URB2Q14146 1524 aaKnown RBP40.32■■■■■ 4.05
FRMD8-208ENST00000531296 CCDC88BA6NC98 1476 aa40.3■■■■■ 4.04
FRMD8-208ENST00000531296 PRDM2Q13029 1718 aa40.3■■■■■ 4.04
FRMD8-208ENST00000531296 TOPBP1Q92547 1522 aa39.87■■■■□ 3.97
FRMD8-208ENST00000531296 IFT140Q96RY7 1462 aa39.8■■■■□ 3.96
FRMD8-208ENST00000531296 ZNF608Q9ULD9 1512 aaPredicted RBP39.8■■■■□ 3.96
FRMD8-208ENST00000531296 DNMBPQ6XZF7 1577 aa39.74■■■■□ 3.95
FRMD8-208ENST00000531296 ABCC8Q09428 1581 aa39.7■■■■□ 3.95
FRMD8-208ENST00000531296 OSCARQ8IYS5 282 aa39.69■■■■□ 3.94
FRMD8-208ENST00000531296 TRIM41Q8WV44 630 aa39.66■■■■□ 3.94
FRMD8-208ENST00000531296 EIF4G3O43432 1585 aaKnown RBP39.59■■■■□ 3.93
FRMD8-208ENST00000531296 TARBP1Q13395 1621 aaKnown RBP39.56■■■■□ 3.92
FRMD8-208ENST00000531296 POLA1P09884 1462 aaPredicted RBP39.49■■■■□ 3.91
FRMD8-208ENST00000531296 AQRO60306 1485 aaKnown RBP eCLIP39.41■■■■□ 3.9
FRMD8-208ENST00000531296 RAD54L2Q9Y4B4 1467 aa39.33■■■■□ 3.89
FRMD8-208ENST00000531296 RIMBP3CA6NJZ7 1639 aa39.32■■■■□ 3.88
FRMD8-208ENST00000531296 RIMBP3BA6NNM3 1639 aa39.32■■■■□ 3.88
FRMD8-208ENST00000531296 RIMBP3Q9UFD9 1639 aa39.32■■■■□ 3.88
FRMD8-208ENST00000531296 CHD1O14646 1710 aa39.27■■■■□ 3.88
FRMD8-208ENST00000531296 CUX1P39880 1505 aa39.27■■■■□ 3.88
FRMD8-208ENST00000531296 FGD5Q6ZNL6 1462 aa39.24■■■■□ 3.87
FRMD8-208ENST00000531296 SOGA1O94964 1423 aa39.23■■■■□ 3.87
FRMD8-208ENST00000531296 ARHGEF11O15085 1522 aa39.19■■■■□ 3.86
FRMD8-208ENST00000531296 TDRD9Q8NDG6 1382 aaKnown RBP39.16■■■■□ 3.86
FRMD8-208ENST00000531296 SUPT5HO00267 1087 aaKnown RBP39.11■■■■□ 3.85
FRMD8-208ENST00000531296 WDR97A6NE52 1622 aa39.1■■■■□ 3.85
FRMD8-208ENST00000531296 SNAPC4Q5SXM2 1469 aa39.02■■■■□ 3.84
FRMD8-208ENST00000531296 FBLN2P98095 1184 aa38.99■■■■□ 3.83
FRMD8-208ENST00000531296 GRIN2BQ13224 1484 aa38.9■■■■□ 3.82
FRMD8-208ENST00000531296 MAGI1Q96QZ7 1491 aaPredicted RBP38.9■■■■□ 3.82
FRMD8-208ENST00000531296 ARAP1Q96P48 1450 aa38.85■■■■□ 3.81
FRMD8-208ENST00000531296 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
FRMD8-208ENST00000531296 PBRM1Q86U86 1689 aa38.83■■■■□ 3.81
FRMD8-208ENST00000531296 ABCA10Q8WWZ4 1543 aa38.81■■■■□ 3.8
FRMD8-208ENST00000531296 ABCA5Q8WWZ7 1642 aa38.79■■■■□ 3.8
FRMD8-208ENST00000531296 CYB5RLQ6IPT4 315 aa38.79■■■■□ 3.8
FRMD8-208ENST00000531296 GAPVD1Q14C86 1478 aa38.79■■■■□ 3.8
FRMD8-208ENST00000531296 SYNJ2O15056 1496 aa38.77■■■■□ 3.8
FRMD8-208ENST00000531296 SYNJ1O43426 1573 aa38.74■■■■□ 3.79
FRMD8-208ENST00000531296 CHMP7Q8WUX9 453 aaPredicted RBP38.73■■■■□ 3.79
FRMD8-208ENST00000531296 BIVM-ERCC5R4GMW8 1640 aa38.67■■■■□ 3.78
FRMD8-208ENST00000531296 TOP2BQ02880 1626 aa38.65■■■■□ 3.78
FRMD8-208ENST00000531296 WRNQ14191 1432 aaPredicted RBP eCLIP38.61■■■■□ 3.77
FRMD8-208ENST00000531296 ADAMTS12P58397 1594 aa38.47■■■■□ 3.75
FRMD8-208ENST00000531296 GRIN2AQ12879 1464 aa38.43■■■■□ 3.74
FRMD8-208ENST00000531296 CEP170Q5SW79 1584 aa38.34■■■■□ 3.73
FRMD8-208ENST00000531296 NUP160Q12769 1436 aa38.32■■■■□ 3.73
FRMD8-208ENST00000531296 ERICH3Q5RHP9 1530 aa38.31■■■■□ 3.72
FRMD8-208ENST00000531296 FHAD1B1AJZ9 1412 aa38.29■■■■□ 3.72
FRMD8-208ENST00000531296 ERCC6L2Q5T890 1561 aa38.27■■■■□ 3.72
FRMD8-208ENST00000531296 TRHP20396 242 aaPredicted RBP38.25■■■■□ 3.71
FRMD8-208ENST00000531296 SHROOM2Q13796 1616 aa38.16■■■■□ 3.7
FRMD8-208ENST00000531296 RUSC2Q8N2Y8 1516 aa37.94■■■■□ 3.66
FRMD8-208ENST00000531296 PRG4Q92954 1404 aaPredicted RBP37.87■■■■□ 3.65
FRMD8-208ENST00000531296 IGF1RP08069 1367 aa37.83■■■■□ 3.65
FRMD8-208ENST00000531296 JPH4Q96JJ6 628 aa37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms