RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 NISCHQ9Y2I1 1504 aa55.46■■■■■ 6.47
SUSD3-202ENST00000375472 CCDC180Q9P1Z9 1646 aa49.27■■■■■ 5.48
SUSD3-202ENST00000375472 ABCC9O60706 1549 aa48.01■■■■■ 5.28
SUSD3-202ENST00000375472 NACADO15069 1562 aa46.33■■■■■ 5.01
SUSD3-202ENST00000375472 RB1CC1Q8TDY2 1594 aa46.33■■■■■ 5.01
SUSD3-202ENST00000375472 DCAF8L2P0C7V8 631 aa46.26■■■■■ 5
SUSD3-202ENST00000375472 ZCCHC6Q5VYS8 1495 aaKnown RBP46.22■■■■■ 4.99
SUSD3-202ENST00000375472 MYO15BQ96JP2 1530 aa46.14■■■■■ 4.98
SUSD3-202ENST00000375472 DCAF1Q9Y4B6 1507 aa45.97■■■■■ 4.95
SUSD3-202ENST00000375472 UNC13AQ9UPW8 1703 aa45.16■■■■■ 4.82
SUSD3-202ENST00000375472 PABPN1Q86U42 306 aaKnown RBP eCLIP44.88■■■■■ 4.78
SUSD3-202ENST00000375472 SCRIBQ14160 1630 aa44.87■■■■■ 4.77
SUSD3-202ENST00000375472 BICRAQ9NZM4 1560 aa44.83■■■■■ 4.77
SUSD3-202ENST00000375472 SHROOM4Q9ULL8 1493 aa44.54■■■■■ 4.72
SUSD3-202ENST00000375472 DNAJC5BQ9UF47 199 aa43.91■■■■■ 4.62
SUSD3-202ENST00000375472 EIF4G1Q04637 1599 aaKnown RBP43.68■■■■■ 4.58
SUSD3-202ENST00000375472 CC2D2AQ9P2K1 1620 aa43.45■■■■■ 4.55
SUSD3-202ENST00000375472 CECR2Q9BXF3 1484 aa43.17■■■■■ 4.5
SUSD3-202ENST00000375472 BAZ1AQ9NRL2 1556 aaPredicted RBP43■■■■■ 4.47
SUSD3-202ENST00000375472 SMARCA4P51532 1647 aa42.98■■■■■ 4.47
SUSD3-202ENST00000375472 ATAD2BQ9ULI0 1458 aa42.74■■■■■ 4.43
SUSD3-202ENST00000375472 NCAPD3P42695 1498 aa42.74■■■■■ 4.43
SUSD3-202ENST00000375472 SMARCA2P51531 1590 aa42.73■■■■■ 4.43
SUSD3-202ENST00000375472 MROH2BQ7Z745 1585 aa42.69■■■■■ 4.42
SUSD3-202ENST00000375472 PEG3Q9GZU2 1588 aa42.61■■■■■ 4.41
SUSD3-202ENST00000375472 HMGXB3Q12766 1538 aa42.52■■■■■ 4.4
SUSD3-202ENST00000375472 BAZ1BQ9UIG0 1483 aaKnown RBP42.41■■■■■ 4.38
SUSD3-202ENST00000375472 RSF1Q96T23 1441 aaPredicted RBP42.29■■■■■ 4.36
SUSD3-202ENST00000375472 WIZO95785 1651 aa42.22■■■■■ 4.35
SUSD3-202ENST00000375472 TOP2AP11388 1531 aaKnown RBP41.85■■■■■ 4.29
SUSD3-202ENST00000375472 LAMC3Q9Y6N6 1575 aa41.59■■■■■ 4.25
SUSD3-202ENST00000375472 NESP48681 1621 aa41.55■■■■■ 4.24
SUSD3-202ENST00000375472 CADPSQ9ULU8 1353 aa41.5■■■■■ 4.23
SUSD3-202ENST00000375472 ERCC6Q03468 1493 aa41.43■■■■■ 4.22
SUSD3-202ENST00000375472 PDS5BQ9NTI5 1447 aa41.34■■■■■ 4.21
SUSD3-202ENST00000375472 CCDC88BA6NC98 1476 aa41.34■■■■■ 4.21
SUSD3-202ENST00000375472 SUPT5HO00267 1087 aaKnown RBP41.28■■■■■ 4.2
SUSD3-202ENST00000375472 CFTRP13569 1480 aa41.27■■■■■ 4.2
SUSD3-202ENST00000375472 KIF21AQ7Z4S6 1674 aa41.07■■■■■ 4.17
SUSD3-202ENST00000375472 CUX2O14529 1486 aa40.99■■■■■ 4.15
SUSD3-202ENST00000375472 FANCD2Q9BXW9 1451 aa40.98■■■■■ 4.15
SUSD3-202ENST00000375472 CEP164Q9UPV0 1460 aa40.94■■■■■ 4.14
SUSD3-202ENST00000375472 THOC2Q8NI27 1593 aaKnown RBP40.93■■■■■ 4.14
SUSD3-202ENST00000375472 PRDM2Q13029 1718 aa40.93■■■■■ 4.14
SUSD3-202ENST00000375472 MRC2Q9UBG0 1479 aa40.84■■■■■ 4.13
SUSD3-202ENST00000375472 WDR62O43379 1518 aa40.7■■■■■ 4.11
SUSD3-202ENST00000375472 URB2Q14146 1524 aaKnown RBP40.52■■■■■ 4.08
SUSD3-202ENST00000375472 ABCC8Q09428 1581 aa40.45■■■■■ 4.07
SUSD3-202ENST00000375472 TOPBP1Q92547 1522 aa40.33■■■■■ 4.05
SUSD3-202ENST00000375472 DNMBPQ6XZF7 1577 aa40.31■■■■■ 4.04
SUSD3-202ENST00000375472 IFT140Q96RY7 1462 aa40.1■■■■■ 4.01
SUSD3-202ENST00000375472 CUX1P39880 1505 aa40.05■■■■■ 4
SUSD3-202ENST00000375472 POLA1P09884 1462 aaPredicted RBP40■■■■□ 3.99
SUSD3-202ENST00000375472 FGD5Q6ZNL6 1462 aa39.91■■■■□ 3.98
SUSD3-202ENST00000375472 WRNQ14191 1432 aaPredicted RBP eCLIP39.9■■■■□ 3.98
SUSD3-202ENST00000375472 SOGA1O94964 1423 aa39.87■■■■□ 3.97
SUSD3-202ENST00000375472 TARBP1Q13395 1621 aaKnown RBP39.87■■■■□ 3.97
SUSD3-202ENST00000375472 ZNF608Q9ULD9 1512 aaPredicted RBP39.81■■■■□ 3.96
SUSD3-202ENST00000375472 TOP2BQ02880 1626 aa39.78■■■■□ 3.96
SUSD3-202ENST00000375472 RAD54L2Q9Y4B4 1467 aa39.78■■■■□ 3.96
SUSD3-202ENST00000375472 BIVM-ERCC5R4GMW8 1640 aa39.76■■■■□ 3.96
SUSD3-202ENST00000375472 SYNJ1O43426 1573 aa39.72■■■■□ 3.95
SUSD3-202ENST00000375472 EIF4G3O43432 1585 aaKnown RBP39.67■■■■□ 3.94
SUSD3-202ENST00000375472 WDR97A6NE52 1622 aa39.67■■■■□ 3.94
SUSD3-202ENST00000375472 AQRO60306 1485 aaKnown RBP eCLIP39.62■■■■□ 3.93
SUSD3-202ENST00000375472 TDRD9Q8NDG6 1382 aaKnown RBP39.58■■■■□ 3.93
SUSD3-202ENST00000375472 ABCA10Q8WWZ4 1543 aa39.57■■■■□ 3.93
SUSD3-202ENST00000375472 DNAJC5Q9H3Z4 198 aa39.56■■■■□ 3.92
SUSD3-202ENST00000375472 GAPVD1Q14C86 1478 aa39.41■■■■□ 3.9
SUSD3-202ENST00000375472 GRIN2BQ13224 1484 aa39.4■■■■□ 3.9
SUSD3-202ENST00000375472 ABCA5Q8WWZ7 1642 aa39.36■■■■□ 3.89
SUSD3-202ENST00000375472 OSCARQ8IYS5 282 aa39.33■■■■□ 3.89
SUSD3-202ENST00000375472 MAGI1Q96QZ7 1491 aaPredicted RBP39.3■■■■□ 3.88
SUSD3-202ENST00000375472 SNAPC4Q5SXM2 1469 aa39.27■■■■□ 3.88
SUSD3-202ENST00000375472 PBRM1Q86U86 1689 aa39.25■■■■□ 3.87
SUSD3-202ENST00000375472 FBLN2P98095 1184 aa39.15■■■■□ 3.86
SUSD3-202ENST00000375472 CHD1O14646 1710 aa39.13■■■■□ 3.85
SUSD3-202ENST00000375472 SYNJ2O15056 1496 aa39.12■■■■□ 3.85
SUSD3-202ENST00000375472 CHMP7Q8WUX9 453 aaPredicted RBP39.12■■■■□ 3.85
SUSD3-202ENST00000375472 ERICH3Q5RHP9 1530 aa39.12■■■■□ 3.85
SUSD3-202ENST00000375472 KIF27Q86VH2 1401 aa39.09■■■■□ 3.85
SUSD3-202ENST00000375472 TRIM41Q8WV44 630 aa39.06■■■■□ 3.84
SUSD3-202ENST00000375472 FHAD1B1AJZ9 1412 aa38.98■■■■□ 3.83
SUSD3-202ENST00000375472 ADAMTS12P58397 1594 aa38.97■■■■□ 3.83
SUSD3-202ENST00000375472 IGF1RP08069 1367 aa38.87■■■■□ 3.81
SUSD3-202ENST00000375472 GRIN2AQ12879 1464 aa38.86■■■■□ 3.81
SUSD3-202ENST00000375472 CUL7Q14999 1698 aa38.78■■■■□ 3.8
SUSD3-202ENST00000375472 CLASP1Q7Z460 1538 aa38.75■■■■□ 3.79
SUSD3-202ENST00000375472 NUP160Q12769 1436 aa38.71■■■■□ 3.79
SUSD3-202ENST00000375472 CARMIL1Q5VZK9 1371 aa38.67■■■■□ 3.78
SUSD3-202ENST00000375472 RUSC2Q8N2Y8 1516 aa38.63■■■■□ 3.78
SUSD3-202ENST00000375472 CHIC1Q5VXU3 224 aa38.62■■■■□ 3.77
SUSD3-202ENST00000375472 CEP170Q5SW79 1584 aa38.61■■■■□ 3.77
SUSD3-202ENST00000375472 ARHGEF11O15085 1522 aa38.61■■■■□ 3.77
SUSD3-202ENST00000375472 RIMBP3CA6NJZ7 1639 aa38.58■■■■□ 3.77
SUSD3-202ENST00000375472 RIMBP3BA6NNM3 1639 aa38.58■■■■□ 3.77
SUSD3-202ENST00000375472 RIMBP3Q9UFD9 1639 aa38.58■■■■□ 3.77
SUSD3-202ENST00000375472 EEA1Q15075 1411 aa38.46■■■■□ 3.75
SUSD3-202ENST00000375472 RAPGEF2Q9Y4G8 1499 aa38.45■■■■□ 3.75
SUSD3-202ENST00000375472 KIAA0586Q9BVV6 1533 aa38.38■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms