RNA–Protein interactions for RNA: ENST00000613563.1

GRAMD4P4-201, Transcript of GRAM domain containing 4 pseudogene 4, humanhuman

BASIC

Gene GRAMD4P4, Length 1,115 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P4-201ENST00000613563 NISCHQ9Y2I1 1504 aa54.83■■■■■ 6.37
GRAMD4P4-201ENST00000613563 CCDC180Q9P1Z9 1646 aa49.01■■■■■ 5.44
GRAMD4P4-201ENST00000613563 ABCC9O60706 1549 aa48.6■■■■■ 5.37
GRAMD4P4-201ENST00000613563 RB1CC1Q8TDY2 1594 aa46.43■■■■■ 5.02
GRAMD4P4-201ENST00000613563 NACADO15069 1562 aa46.22■■■■■ 4.99
GRAMD4P4-201ENST00000613563 DCAF8L2P0C7V8 631 aa46.17■■■■■ 4.98
GRAMD4P4-201ENST00000613563 MYO15BQ96JP2 1530 aa45.7■■■■■ 4.91
GRAMD4P4-201ENST00000613563 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
GRAMD4P4-201ENST00000613563 UNC13AQ9UPW8 1703 aa45.39■■■■■ 4.86
GRAMD4P4-201ENST00000613563 PABPN1Q86U42 306 aaKnown RBP eCLIP45.33■■■■■ 4.85
GRAMD4P4-201ENST00000613563 DCAF1Q9Y4B6 1507 aa45.29■■■■■ 4.84
GRAMD4P4-201ENST00000613563 DNAJC5BQ9UF47 199 aa45.14■■■■■ 4.82
GRAMD4P4-201ENST00000613563 BICRAQ9NZM4 1560 aa45.04■■■■■ 4.8
GRAMD4P4-201ENST00000613563 SCRIBQ14160 1630 aa44.73■■■■■ 4.75
GRAMD4P4-201ENST00000613563 SHROOM4Q9ULL8 1493 aa44.47■■■■■ 4.71
GRAMD4P4-201ENST00000613563 EIF4G1Q04637 1599 aaKnown RBP43.92■■■■■ 4.62
GRAMD4P4-201ENST00000613563 CC2D2AQ9P2K1 1620 aa43.91■■■■■ 4.62
GRAMD4P4-201ENST00000613563 CECR2Q9BXF3 1484 aa43.71■■■■■ 4.59
GRAMD4P4-201ENST00000613563 SMARCA4P51532 1647 aa42.69■■■■■ 4.42
GRAMD4P4-201ENST00000613563 NCAPD3P42695 1498 aa42.65■■■■■ 4.42
GRAMD4P4-201ENST00000613563 ATAD2BQ9ULI0 1458 aa42.61■■■■■ 4.41
GRAMD4P4-201ENST00000613563 BAZ1AQ9NRL2 1556 aaPredicted RBP42.54■■■■■ 4.4
GRAMD4P4-201ENST00000613563 SMARCA2P51531 1590 aa42.52■■■■■ 4.4
GRAMD4P4-201ENST00000613563 HMGXB3Q12766 1538 aa42.39■■■■■ 4.38
GRAMD4P4-201ENST00000613563 MROH2BQ7Z745 1585 aa42.27■■■■■ 4.36
GRAMD4P4-201ENST00000613563 BAZ1BQ9UIG0 1483 aaKnown RBP42.24■■■■■ 4.35
GRAMD4P4-201ENST00000613563 PEG3Q9GZU2 1588 aa42.24■■■■■ 4.35
GRAMD4P4-201ENST00000613563 ERCC6Q03468 1493 aa41.94■■■■■ 4.3
GRAMD4P4-201ENST00000613563 NESP48681 1621 aa41.87■■■■■ 4.29
GRAMD4P4-201ENST00000613563 WIZO95785 1651 aa41.8■■■■■ 4.28
GRAMD4P4-201ENST00000613563 CUX2O14529 1486 aa41.66■■■■■ 4.26
GRAMD4P4-201ENST00000613563 LAMC3Q9Y6N6 1575 aa41.63■■■■■ 4.26
GRAMD4P4-201ENST00000613563 RSF1Q96T23 1441 aaPredicted RBP41.55■■■■■ 4.24
GRAMD4P4-201ENST00000613563 CADPSQ9ULU8 1353 aa41.39■■■■■ 4.22
GRAMD4P4-201ENST00000613563 PDS5BQ9NTI5 1447 aa41.39■■■■■ 4.22
GRAMD4P4-201ENST00000613563 KIF21AQ7Z4S6 1674 aa41.36■■■■■ 4.21
GRAMD4P4-201ENST00000613563 THOC2Q8NI27 1593 aaKnown RBP41.33■■■■■ 4.21
GRAMD4P4-201ENST00000613563 TOP2AP11388 1531 aaKnown RBP41.29■■■■■ 4.2
GRAMD4P4-201ENST00000613563 DNAJC5Q9H3Z4 198 aa41.1■■■■■ 4.17
GRAMD4P4-201ENST00000613563 CFTRP13569 1480 aa41.01■■■■■ 4.16
GRAMD4P4-201ENST00000613563 MRC2Q9UBG0 1479 aa41.01■■■■■ 4.16
GRAMD4P4-201ENST00000613563 CEP164Q9UPV0 1460 aa40.95■■■■■ 4.15
GRAMD4P4-201ENST00000613563 FANCD2Q9BXW9 1451 aa40.94■■■■■ 4.14
GRAMD4P4-201ENST00000613563 WDR62O43379 1518 aa40.88■■■■■ 4.14
GRAMD4P4-201ENST00000613563 CCDC88BA6NC98 1476 aa40.83■■■■■ 4.13
GRAMD4P4-201ENST00000613563 PRDM2Q13029 1718 aa40.67■■■■■ 4.1
GRAMD4P4-201ENST00000613563 URB2Q14146 1524 aaKnown RBP40.57■■■■■ 4.08
GRAMD4P4-201ENST00000613563 TOPBP1Q92547 1522 aa40.21■■■■■ 4.03
GRAMD4P4-201ENST00000613563 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
GRAMD4P4-201ENST00000613563 SUPT5HO00267 1087 aaKnown RBP40.14■■■■■ 4.02
GRAMD4P4-201ENST00000613563 DNMBPQ6XZF7 1577 aa40.11■■■■■ 4.01
GRAMD4P4-201ENST00000613563 IFT140Q96RY7 1462 aa40.1■■■■■ 4.01
GRAMD4P4-201ENST00000613563 ZNF608Q9ULD9 1512 aaPredicted RBP40■■■■□ 3.99
GRAMD4P4-201ENST00000613563 OSCARQ8IYS5 282 aa39.86■■■■□ 3.97
GRAMD4P4-201ENST00000613563 POLA1P09884 1462 aaPredicted RBP39.83■■■■□ 3.97
GRAMD4P4-201ENST00000613563 EIF4G3O43432 1585 aaKnown RBP39.8■■■■□ 3.96
GRAMD4P4-201ENST00000613563 TARBP1Q13395 1621 aaKnown RBP39.8■■■■□ 3.96
GRAMD4P4-201ENST00000613563 AQRO60306 1485 aaKnown RBP eCLIP39.7■■■■□ 3.95
GRAMD4P4-201ENST00000613563 RAD54L2Q9Y4B4 1467 aa39.69■■■■□ 3.94
GRAMD4P4-201ENST00000613563 CUX1P39880 1505 aa39.69■■■■□ 3.94
GRAMD4P4-201ENST00000613563 SOGA1O94964 1423 aa39.67■■■■□ 3.94
GRAMD4P4-201ENST00000613563 FGD5Q6ZNL6 1462 aa39.67■■■■□ 3.94
GRAMD4P4-201ENST00000613563 TRIM41Q8WV44 630 aa39.58■■■■□ 3.93
GRAMD4P4-201ENST00000613563 TDRD9Q8NDG6 1382 aaKnown RBP39.54■■■■□ 3.92
GRAMD4P4-201ENST00000613563 CHD1O14646 1710 aa39.43■■■■□ 3.9
GRAMD4P4-201ENST00000613563 WDR97A6NE52 1622 aa39.43■■■■□ 3.9
GRAMD4P4-201ENST00000613563 FBLN2P98095 1184 aa39.39■■■■□ 3.9
GRAMD4P4-201ENST00000613563 SNAPC4Q5SXM2 1469 aa39.31■■■■□ 3.88
GRAMD4P4-201ENST00000613563 RIMBP3CA6NJZ7 1639 aa39.29■■■■□ 3.88
GRAMD4P4-201ENST00000613563 RIMBP3BA6NNM3 1639 aa39.29■■■■□ 3.88
GRAMD4P4-201ENST00000613563 RIMBP3Q9UFD9 1639 aa39.29■■■■□ 3.88
GRAMD4P4-201ENST00000613563 GRIN2BQ13224 1484 aa39.27■■■■□ 3.88
GRAMD4P4-201ENST00000613563 ABCA10Q8WWZ4 1543 aa39.22■■■■□ 3.87
GRAMD4P4-201ENST00000613563 WRNQ14191 1432 aaPredicted RBP eCLIP39.22■■■■□ 3.87
GRAMD4P4-201ENST00000613563 ARHGEF11O15085 1522 aa39.21■■■■□ 3.87
GRAMD4P4-201ENST00000613563 MAGI1Q96QZ7 1491 aaPredicted RBP39.21■■■■□ 3.87
GRAMD4P4-201ENST00000613563 GAPVD1Q14C86 1478 aa39.19■■■■□ 3.86
GRAMD4P4-201ENST00000613563 BIVM-ERCC5R4GMW8 1640 aa39.18■■■■□ 3.86
GRAMD4P4-201ENST00000613563 TOP2BQ02880 1626 aa39.17■■■■□ 3.86
GRAMD4P4-201ENST00000613563 PBRM1Q86U86 1689 aa39.16■■■■□ 3.86
GRAMD4P4-201ENST00000613563 CHMP7Q8WUX9 453 aaPredicted RBP39.16■■■■□ 3.86
GRAMD4P4-201ENST00000613563 SYNJ1O43426 1573 aa39.16■■■■□ 3.86
GRAMD4P4-201ENST00000613563 ABCA5Q8WWZ7 1642 aa39.12■■■■□ 3.85
GRAMD4P4-201ENST00000613563 SYNJ2O15056 1496 aa39.08■■■■□ 3.85
GRAMD4P4-201ENST00000613563 CLASP1Q7Z460 1538 aa38.96■■■■□ 3.83
GRAMD4P4-201ENST00000613563 CYB5RLQ6IPT4 315 aa38.92■■■■□ 3.82
GRAMD4P4-201ENST00000613563 ARAP1Q96P48 1450 aa38.86■■■■□ 3.81
GRAMD4P4-201ENST00000613563 ADAMTS12P58397 1594 aa38.8■■■■□ 3.8
GRAMD4P4-201ENST00000613563 GRIN2AQ12879 1464 aa38.76■■■■□ 3.8
GRAMD4P4-201ENST00000613563 ERICH3Q5RHP9 1530 aa38.73■■■■□ 3.79
GRAMD4P4-201ENST00000613563 FHAD1B1AJZ9 1412 aa38.71■■■■□ 3.79
GRAMD4P4-201ENST00000613563 NUP160Q12769 1436 aa38.6■■■■□ 3.77
GRAMD4P4-201ENST00000613563 CEP170Q5SW79 1584 aa38.6■■■■□ 3.77
GRAMD4P4-201ENST00000613563 KIF27Q86VH2 1401 aa38.45■■■■□ 3.75
GRAMD4P4-201ENST00000613563 ERCC6L2Q5T890 1561 aa38.41■■■■□ 3.74
GRAMD4P4-201ENST00000613563 SHROOM2Q13796 1616 aa38.38■■■■□ 3.73
GRAMD4P4-201ENST00000613563 TRHP20396 242 aaPredicted RBP38.37■■■■□ 3.73
GRAMD4P4-201ENST00000613563 IGF1RP08069 1367 aa38.34■■■■□ 3.73
GRAMD4P4-201ENST00000613563 CUL7Q14999 1698 aa38.28■■■■□ 3.72
GRAMD4P4-201ENST00000613563 RUSC2Q8N2Y8 1516 aa38.24■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms