RNA–Protein interactions for RNA: ENST00000558336.5

GATM-206, Transcript of glycine amidinotransferase, humanhuman

TSL 2 BASIC

Gene GATM, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-206ENST00000558336 NISCHQ9Y2I1 1504 aa55.03■■■■■ 6.4
GATM-206ENST00000558336 CCDC180Q9P1Z9 1646 aa48.98■■■■■ 5.43
GATM-206ENST00000558336 ABCC9O60706 1549 aa48.06■■■■■ 5.28
GATM-206ENST00000558336 RB1CC1Q8TDY2 1594 aa46.19■■■■■ 4.99
GATM-206ENST00000558336 NACADO15069 1562 aa46.11■■■■■ 4.97
GATM-206ENST00000558336 DCAF8L2P0C7V8 631 aa46.03■■■■■ 4.96
GATM-206ENST00000558336 MYO15BQ96JP2 1530 aa45.81■■■■■ 4.92
GATM-206ENST00000558336 ZCCHC6Q5VYS8 1495 aaKnown RBP45.8■■■■■ 4.92
GATM-206ENST00000558336 DCAF1Q9Y4B6 1507 aa45.55■■■■■ 4.88
GATM-206ENST00000558336 UNC13AQ9UPW8 1703 aa45.09■■■■■ 4.81
GATM-206ENST00000558336 PABPN1Q86U42 306 aaKnown RBP eCLIP44.9■■■■■ 4.78
GATM-206ENST00000558336 BICRAQ9NZM4 1560 aa44.78■■■■■ 4.76
GATM-206ENST00000558336 SCRIBQ14160 1630 aa44.65■■■■■ 4.74
GATM-206ENST00000558336 SHROOM4Q9ULL8 1493 aa44.34■■■■■ 4.69
GATM-206ENST00000558336 DNAJC5BQ9UF47 199 aa44.27■■■■■ 4.68
GATM-206ENST00000558336 EIF4G1Q04637 1599 aaKnown RBP43.62■■■■■ 4.57
GATM-206ENST00000558336 CC2D2AQ9P2K1 1620 aa43.47■■■■■ 4.55
GATM-206ENST00000558336 CECR2Q9BXF3 1484 aa43.22■■■■■ 4.51
GATM-206ENST00000558336 SMARCA4P51532 1647 aa42.72■■■■■ 4.43
GATM-206ENST00000558336 BAZ1AQ9NRL2 1556 aaPredicted RBP42.67■■■■■ 4.42
GATM-206ENST00000558336 NCAPD3P42695 1498 aa42.57■■■■■ 4.4
GATM-206ENST00000558336 ATAD2BQ9ULI0 1458 aa42.55■■■■■ 4.4
GATM-206ENST00000558336 SMARCA2P51531 1590 aa42.48■■■■■ 4.39
GATM-206ENST00000558336 MROH2BQ7Z745 1585 aa42.39■■■■■ 4.38
GATM-206ENST00000558336 PEG3Q9GZU2 1588 aa42.33■■■■■ 4.37
GATM-206ENST00000558336 HMGXB3Q12766 1538 aa42.32■■■■■ 4.36
GATM-206ENST00000558336 BAZ1BQ9UIG0 1483 aaKnown RBP42.18■■■■■ 4.34
GATM-206ENST00000558336 WIZO95785 1651 aa41.91■■■■■ 4.3
GATM-206ENST00000558336 RSF1Q96T23 1441 aaPredicted RBP41.87■■■■■ 4.29
GATM-206ENST00000558336 NESP48681 1621 aa41.54■■■■■ 4.24
GATM-206ENST00000558336 TOP2AP11388 1531 aaKnown RBP41.48■■■■■ 4.23
GATM-206ENST00000558336 LAMC3Q9Y6N6 1575 aa41.45■■■■■ 4.23
GATM-206ENST00000558336 ERCC6Q03468 1493 aa41.45■■■■■ 4.23
GATM-206ENST00000558336 CADPSQ9ULU8 1353 aa41.31■■■■■ 4.2
GATM-206ENST00000558336 PDS5BQ9NTI5 1447 aa41.19■■■■■ 4.18
GATM-206ENST00000558336 CUX2O14529 1486 aa41.09■■■■■ 4.17
GATM-206ENST00000558336 KIF21AQ7Z4S6 1674 aa41.03■■■■■ 4.16
GATM-206ENST00000558336 CFTRP13569 1480 aa41.03■■■■■ 4.16
GATM-206ENST00000558336 CCDC88BA6NC98 1476 aa41■■■■■ 4.15
GATM-206ENST00000558336 THOC2Q8NI27 1593 aaKnown RBP40.95■■■■■ 4.15
GATM-206ENST00000558336 FANCD2Q9BXW9 1451 aa40.82■■■■■ 4.12
GATM-206ENST00000558336 CEP164Q9UPV0 1460 aa40.77■■■■■ 4.12
GATM-206ENST00000558336 MRC2Q9UBG0 1479 aa40.75■■■■■ 4.11
GATM-206ENST00000558336 SUPT5HO00267 1087 aaKnown RBP40.67■■■■■ 4.1
GATM-206ENST00000558336 PRDM2Q13029 1718 aa40.66■■■■■ 4.1
GATM-206ENST00000558336 WDR62O43379 1518 aa40.62■■■■■ 4.09
GATM-206ENST00000558336 URB2Q14146 1524 aaKnown RBP40.41■■■■■ 4.06
GATM-206ENST00000558336 ABCC8Q09428 1581 aa40.17■■■■■ 4.02
GATM-206ENST00000558336 TOPBP1Q92547 1522 aa40.14■■■■■ 4.02
GATM-206ENST00000558336 DNMBPQ6XZF7 1577 aa40.08■■■■■ 4.01
GATM-206ENST00000558336 DNAJC5Q9H3Z4 198 aa40.03■■■■■ 4
GATM-206ENST00000558336 IFT140Q96RY7 1462 aa39.94■■■■□ 3.98
GATM-206ENST00000558336 POLA1P09884 1462 aaPredicted RBP39.79■■■■□ 3.96
GATM-206ENST00000558336 CUX1P39880 1505 aa39.77■■■■□ 3.96
GATM-206ENST00000558336 ZNF608Q9ULD9 1512 aaPredicted RBP39.75■■■■□ 3.95
GATM-206ENST00000558336 TARBP1Q13395 1621 aaKnown RBP39.71■■■■□ 3.95
GATM-206ENST00000558336 FGD5Q6ZNL6 1462 aa39.67■■■■□ 3.94
GATM-206ENST00000558336 SOGA1O94964 1423 aa39.65■■■■□ 3.94
GATM-206ENST00000558336 RAD54L2Q9Y4B4 1467 aa39.61■■■■□ 3.93
GATM-206ENST00000558336 EIF4G3O43432 1585 aaKnown RBP39.58■■■■□ 3.93
GATM-206ENST00000558336 AQRO60306 1485 aaKnown RBP eCLIP39.52■■■■□ 3.928e-6■■■■□ 23.2
GATM-206ENST00000558336 WRNQ14191 1432 aaPredicted RBP eCLIP39.48■■■■□ 3.91
GATM-206ENST00000558336 TDRD9Q8NDG6 1382 aaKnown RBP39.43■■■■□ 3.9
GATM-206ENST00000558336 WDR97A6NE52 1622 aa39.41■■■■□ 3.9
GATM-206ENST00000558336 TOP2BQ02880 1626 aa39.41■■■■□ 3.9
GATM-206ENST00000558336 BIVM-ERCC5R4GMW8 1640 aa39.39■■■■□ 3.9
GATM-206ENST00000558336 OSCARQ8IYS5 282 aa39.38■■■■□ 3.89
GATM-206ENST00000558336 SYNJ1O43426 1573 aa39.36■■■■□ 3.89
GATM-206ENST00000558336 ABCA10Q8WWZ4 1543 aa39.3■■■■□ 3.88
GATM-206ENST00000558336 GRIN2BQ13224 1484 aa39.2■■■■□ 3.87
GATM-206ENST00000558336 GAPVD1Q14C86 1478 aa39.18■■■■□ 3.86
GATM-206ENST00000558336 SNAPC4Q5SXM2 1469 aa39.14■■■■□ 3.86
GATM-206ENST00000558336 ABCA5Q8WWZ7 1642 aa39.13■■■■□ 3.85
GATM-206ENST00000558336 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
GATM-206ENST00000558336 CHD1O14646 1710 aa39.1■■■■□ 3.85
GATM-206ENST00000558336 FBLN2P98095 1184 aa39.08■■■■□ 3.85
GATM-206ENST00000558336 PBRM1Q86U86 1689 aa39.06■■■■□ 3.84
GATM-206ENST00000558336 CHMP7Q8WUX9 453 aaPredicted RBP38.97■■■■□ 3.83
GATM-206ENST00000558336 SYNJ2O15056 1496 aa38.96■■■■□ 3.83
GATM-206ENST00000558336 ERICH3Q5RHP9 1530 aa38.82■■■■□ 3.81
GATM-206ENST00000558336 ADAMTS12P58397 1594 aa38.76■■■■□ 3.8
GATM-206ENST00000558336 FHAD1B1AJZ9 1412 aa38.73■■■■□ 3.79
GATM-206ENST00000558336 RIMBP3CA6NJZ7 1639 aa38.71■■■■□ 3.79
GATM-206ENST00000558336 RIMBP3BA6NNM3 1639 aa38.71■■■■□ 3.79
GATM-206ENST00000558336 RIMBP3Q9UFD9 1639 aa38.71■■■■□ 3.79
GATM-206ENST00000558336 ARHGEF11O15085 1522 aa38.7■■■■□ 3.79
GATM-206ENST00000558336 CLASP1Q7Z460 1538 aa38.7■■■■□ 3.79
GATM-206ENST00000558336 GRIN2AQ12879 1464 aa38.69■■■■□ 3.78
GATM-206ENST00000558336 KIF27Q86VH2 1401 aa38.68■■■■□ 3.78
GATM-206ENST00000558336 TRIM41Q8WV44 630 aa38.6■■■■□ 3.77
GATM-206ENST00000558336 IGF1RP08069 1367 aa38.55■■■■□ 3.76
GATM-206ENST00000558336 NUP160Q12769 1436 aa38.53■■■■□ 3.76
GATM-206ENST00000558336 CEP170Q5SW79 1584 aa38.48■■■■□ 3.75
GATM-206ENST00000558336 CUL7Q14999 1698 aa38.43■■■■□ 3.74
GATM-206ENST00000558336 ARAP1Q96P48 1450 aa38.38■■■■□ 3.73
GATM-206ENST00000558336 CYB5RLQ6IPT4 315 aa38.37■■■■□ 3.73
GATM-206ENST00000558336 CARMIL1Q5VZK9 1371 aa38.31■■■■□ 3.72
GATM-206ENST00000558336 RUSC2Q8N2Y8 1516 aa38.25■■■■□ 3.71
GATM-206ENST00000558336 SHROOM2Q13796 1616 aa38.24■■■■□ 3.71
GATM-206ENST00000558336 JPH4Q96JJ6 628 aa38.15■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms