RNA–Protein interactions for RNA: ENST00000549659.1

NKX2-2-AS1-201, NKX2-2 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene NKX2-2-AS1, Length 638 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-AS1-201ENST00000549659 NISCHQ9Y2I1 1504 aa54.57■■■■■ 6.33
NKX2-2-AS1-201ENST00000549659 CCDC180Q9P1Z9 1646 aa48.78■■■■■ 5.4
NKX2-2-AS1-201ENST00000549659 ABCC9O60706 1549 aa48.49■■■■■ 5.35
NKX2-2-AS1-201ENST00000549659 RB1CC1Q8TDY2 1594 aa46.3■■■■■ 5
NKX2-2-AS1-201ENST00000549659 NACADO15069 1562 aa46.08■■■■■ 4.97
NKX2-2-AS1-201ENST00000549659 DCAF8L2P0C7V8 631 aa45.98■■■■■ 4.95
NKX2-2-AS1-201ENST00000549659 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.88
NKX2-2-AS1-201ENST00000549659 ZCCHC6Q5VYS8 1495 aaKnown RBP45.29■■■■■ 4.84
NKX2-2-AS1-201ENST00000549659 PABPN1Q86U42 306 aaKnown RBP eCLIP45.23■■■■■ 4.83
NKX2-2-AS1-201ENST00000549659 DNAJC5BQ9UF47 199 aa45.21■■■■■ 4.83
NKX2-2-AS1-201ENST00000549659 UNC13AQ9UPW8 1703 aa45.19■■■■■ 4.82
NKX2-2-AS1-201ENST00000549659 DCAF1Q9Y4B6 1507 aa45.1■■■■■ 4.81
NKX2-2-AS1-201ENST00000549659 BICRAQ9NZM4 1560 aa44.91■■■■■ 4.78
NKX2-2-AS1-201ENST00000549659 SCRIBQ14160 1630 aa44.48■■■■■ 4.71
NKX2-2-AS1-201ENST00000549659 SHROOM4Q9ULL8 1493 aa44.38■■■■■ 4.69
NKX2-2-AS1-201ENST00000549659 CC2D2AQ9P2K1 1620 aa43.8■■■■■ 4.6
NKX2-2-AS1-201ENST00000549659 EIF4G1Q04637 1599 aaKnown RBP43.8■■■■■ 4.6
NKX2-2-AS1-201ENST00000549659 CECR2Q9BXF3 1484 aa43.65■■■■■ 4.58
NKX2-2-AS1-201ENST00000549659 NCAPD3P42695 1498 aa42.55■■■■■ 4.4
NKX2-2-AS1-201ENST00000549659 SMARCA4P51532 1647 aa42.47■■■■■ 4.39
NKX2-2-AS1-201ENST00000549659 ATAD2BQ9ULI0 1458 aa42.46■■■■■ 4.39
NKX2-2-AS1-201ENST00000549659 SMARCA2P51531 1590 aa42.35■■■■■ 4.37
NKX2-2-AS1-201ENST00000549659 BAZ1AQ9NRL2 1556 aaPredicted RBP42.33■■■■■ 4.37
NKX2-2-AS1-201ENST00000549659 HMGXB3Q12766 1538 aa42.23■■■■■ 4.35
NKX2-2-AS1-201ENST00000549659 PEG3Q9GZU2 1588 aa42.06■■■■■ 4.32
NKX2-2-AS1-201ENST00000549659 BAZ1BQ9UIG0 1483 aaKnown RBP42.06■■■■■ 4.32
NKX2-2-AS1-201ENST00000549659 MROH2BQ7Z745 1585 aa42.05■■■■■ 4.32
NKX2-2-AS1-201ENST00000549659 ERCC6Q03468 1493 aa41.85■■■■■ 4.29
NKX2-2-AS1-201ENST00000549659 NESP48681 1621 aa41.74■■■■■ 4.27
NKX2-2-AS1-201ENST00000549659 CUX2O14529 1486 aa41.66■■■■■ 4.26
NKX2-2-AS1-201ENST00000549659 WIZO95785 1651 aa41.54■■■■■ 4.24
NKX2-2-AS1-201ENST00000549659 LAMC3Q9Y6N6 1575 aa41.51■■■■■ 4.24
NKX2-2-AS1-201ENST00000549659 RSF1Q96T23 1441 aaPredicted RBP41.33■■■■■ 4.21
NKX2-2-AS1-201ENST00000549659 PDS5BQ9NTI5 1447 aa41.3■■■■■ 4.2
NKX2-2-AS1-201ENST00000549659 DNAJC5Q9H3Z4 198 aa41.29■■■■■ 4.2
NKX2-2-AS1-201ENST00000549659 CADPSQ9ULU8 1353 aa41.28■■■■■ 4.2
NKX2-2-AS1-201ENST00000549659 THOC2Q8NI27 1593 aaKnown RBP41.22■■■■■ 4.19
NKX2-2-AS1-201ENST00000549659 KIF21AQ7Z4S6 1674 aa41.18■■■■■ 4.18
NKX2-2-AS1-201ENST00000549659 TOP2AP11388 1531 aaKnown RBP41.05■■■■■ 4.16
NKX2-2-AS1-201ENST00000549659 MRC2Q9UBG0 1479 aa40.9■■■■■ 4.14
NKX2-2-AS1-201ENST00000549659 CFTRP13569 1480 aa40.87■■■■■ 4.13
NKX2-2-AS1-201ENST00000549659 CEP164Q9UPV0 1460 aa40.8■■■■■ 4.12
NKX2-2-AS1-201ENST00000549659 FANCD2Q9BXW9 1451 aa40.79■■■■■ 4.12
NKX2-2-AS1-201ENST00000549659 WDR62O43379 1518 aa40.76■■■■■ 4.12
NKX2-2-AS1-201ENST00000549659 CCDC88BA6NC98 1476 aa40.61■■■■■ 4.09
NKX2-2-AS1-201ENST00000549659 URB2Q14146 1524 aaKnown RBP40.42■■■■■ 4.06
NKX2-2-AS1-201ENST00000549659 PRDM2Q13029 1718 aa40.42■■■■■ 4.06
NKX2-2-AS1-201ENST00000549659 TOPBP1Q92547 1522 aa40.06■■■■■ 4
NKX2-2-AS1-201ENST00000549659 ABCC8Q09428 1581 aa40.02■■■■■ 4
NKX2-2-AS1-201ENST00000549659 IFT140Q96RY7 1462 aa39.99■■■■□ 3.99
NKX2-2-AS1-201ENST00000549659 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
NKX2-2-AS1-201ENST00000549659 OSCARQ8IYS5 282 aa39.88■■■■□ 3.97
NKX2-2-AS1-201ENST00000549659 ZNF608Q9ULD9 1512 aaPredicted RBP39.87■■■■□ 3.97
NKX2-2-AS1-201ENST00000549659 SUPT5HO00267 1087 aaKnown RBP39.79■■■■□ 3.96
NKX2-2-AS1-201ENST00000549659 POLA1P09884 1462 aaPredicted RBP39.67■■■■□ 3.94
NKX2-2-AS1-201ENST00000549659 TARBP1Q13395 1621 aaKnown RBP39.65■■■■□ 3.94
NKX2-2-AS1-201ENST00000549659 EIF4G3O43432 1585 aaKnown RBP39.63■■■■□ 3.94
NKX2-2-AS1-201ENST00000549659 TRIM41Q8WV44 630 aa39.61■■■■□ 3.93
NKX2-2-AS1-201ENST00000549659 AQRO60306 1485 aaKnown RBP eCLIP39.57■■■■□ 3.93
NKX2-2-AS1-201ENST00000549659 SOGA1O94964 1423 aa39.53■■■■□ 3.92
NKX2-2-AS1-201ENST00000549659 RAD54L2Q9Y4B4 1467 aa39.52■■■■□ 3.92
NKX2-2-AS1-201ENST00000549659 CUX1P39880 1505 aa39.48■■■■□ 3.91
NKX2-2-AS1-201ENST00000549659 FGD5Q6ZNL6 1462 aa39.47■■■■□ 3.91
NKX2-2-AS1-201ENST00000549659 TDRD9Q8NDG6 1382 aaKnown RBP39.4■■■■□ 3.9
NKX2-2-AS1-201ENST00000549659 FBLN2P98095 1184 aa39.29■■■■□ 3.88
NKX2-2-AS1-201ENST00000549659 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
NKX2-2-AS1-201ENST00000549659 CHD1O14646 1710 aa39.26■■■■□ 3.88
NKX2-2-AS1-201ENST00000549659 RIMBP3CA6NJZ7 1639 aa39.23■■■■□ 3.87
NKX2-2-AS1-201ENST00000549659 RIMBP3BA6NNM3 1639 aa39.23■■■■□ 3.87
NKX2-2-AS1-201ENST00000549659 RIMBP3Q9UFD9 1639 aa39.23■■■■□ 3.87
NKX2-2-AS1-201ENST00000549659 SNAPC4Q5SXM2 1469 aa39.17■■■■□ 3.86
NKX2-2-AS1-201ENST00000549659 ARHGEF11O15085 1522 aa39.15■■■■□ 3.86
NKX2-2-AS1-201ENST00000549659 GRIN2BQ13224 1484 aa39.13■■■■□ 3.85
NKX2-2-AS1-201ENST00000549659 MAGI1Q96QZ7 1491 aaPredicted RBP39.09■■■■□ 3.85
NKX2-2-AS1-201ENST00000549659 CHMP7Q8WUX9 453 aaPredicted RBP39.06■■■■□ 3.84
NKX2-2-AS1-201ENST00000549659 ABCA10Q8WWZ4 1543 aa39.04■■■■□ 3.84
NKX2-2-AS1-201ENST00000549659 GAPVD1Q14C86 1478 aa39.04■■■■□ 3.84
NKX2-2-AS1-201ENST00000549659 WRNQ14191 1432 aaPredicted RBP eCLIP38.98■■■■□ 3.83
NKX2-2-AS1-201ENST00000549659 SYNJ2O15056 1496 aa38.95■■■■□ 3.83
NKX2-2-AS1-201ENST00000549659 PBRM1Q86U86 1689 aa38.94■■■■□ 3.82
NKX2-2-AS1-201ENST00000549659 TOP2BQ02880 1626 aa38.93■■■■□ 3.82
NKX2-2-AS1-201ENST00000549659 ABCA5Q8WWZ7 1642 aa38.92■■■■□ 3.82
NKX2-2-AS1-201ENST00000549659 BIVM-ERCC5R4GMW8 1640 aa38.92■■■■□ 3.82
NKX2-2-AS1-201ENST00000549659 CYB5RLQ6IPT4 315 aa38.91■■■■□ 3.82
NKX2-2-AS1-201ENST00000549659 SYNJ1O43426 1573 aa38.88■■■■□ 3.81
NKX2-2-AS1-201ENST00000549659 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
NKX2-2-AS1-201ENST00000549659 ARAP1Q96P48 1450 aa38.8■■■■□ 3.8
NKX2-2-AS1-201ENST00000549659 GRIN2AQ12879 1464 aa38.6■■■■□ 3.77
NKX2-2-AS1-201ENST00000549659 ADAMTS12P58397 1594 aa38.6■■■■□ 3.77
NKX2-2-AS1-201ENST00000549659 FHAD1B1AJZ9 1412 aa38.56■■■■□ 3.76
NKX2-2-AS1-201ENST00000549659 ERICH3Q5RHP9 1530 aa38.56■■■■□ 3.76
NKX2-2-AS1-201ENST00000549659 NUP160Q12769 1436 aa38.47■■■■□ 3.75
NKX2-2-AS1-201ENST00000549659 CEP170Q5SW79 1584 aa38.43■■■■□ 3.74
NKX2-2-AS1-201ENST00000549659 TRHP20396 242 aaPredicted RBP38.37■■■■□ 3.73
NKX2-2-AS1-201ENST00000549659 ERCC6L2Q5T890 1561 aa38.27■■■■□ 3.72
NKX2-2-AS1-201ENST00000549659 KIF27Q86VH2 1401 aa38.23■■■■□ 3.71
NKX2-2-AS1-201ENST00000549659 SHROOM2Q13796 1616 aa38.23■■■■□ 3.71
NKX2-2-AS1-201ENST00000549659 IGF1RP08069 1367 aa38.19■■■■□ 3.7
NKX2-2-AS1-201ENST00000549659 JPH4Q96JJ6 628 aa38.14■■■■□ 3.7
NKX2-2-AS1-201ENST00000549659 PRG4Q92954 1404 aaPredicted RBP38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms