RNA–Protein interactions for RNA: ENST00000553372.1

PTGDR-202, Transcript of prostaglandin D2 receptor, humanhuman

TSL 3 BASIC

Gene PTGDR, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDR-202ENST00000553372 NISCHQ9Y2I1 1504 aa53.68■■■■■ 6.18
PTGDR-202ENST00000553372 ABCC9O60706 1549 aa48.64■■■■■ 5.38
PTGDR-202ENST00000553372 CCDC180Q9P1Z9 1646 aa48.39■■■■■ 5.34
PTGDR-202ENST00000553372 RB1CC1Q8TDY2 1594 aa46.23■■■■■ 4.99
PTGDR-202ENST00000553372 DNAJC5BQ9UF47 199 aa45.93■■■■■ 4.94
PTGDR-202ENST00000553372 NACADO15069 1562 aa45.84■■■■■ 4.93
PTGDR-202ENST00000553372 DCAF8L2P0C7V8 631 aa45.42■■■■■ 4.86
PTGDR-202ENST00000553372 PABPN1Q86U42 306 aaKnown RBP eCLIP45.21■■■■■ 4.83
PTGDR-202ENST00000553372 UNC13AQ9UPW8 1703 aa45.14■■■■■ 4.82
PTGDR-202ENST00000553372 MYO15BQ96JP2 1530 aa45.12■■■■■ 4.81
PTGDR-202ENST00000553372 BICRAQ9NZM4 1560 aa44.83■■■■■ 4.77
PTGDR-202ENST00000553372 ZCCHC6Q5VYS8 1495 aaKnown RBP44.39■■■■■ 4.7
PTGDR-202ENST00000553372 DCAF1Q9Y4B6 1507 aa44.38■■■■■ 4.69
PTGDR-202ENST00000553372 SHROOM4Q9ULL8 1493 aa44.33■■■■■ 4.69
PTGDR-202ENST00000553372 CC2D2AQ9P2K1 1620 aa43.96■■■■■ 4.63
PTGDR-202ENST00000553372 SCRIBQ14160 1630 aa43.95■■■■■ 4.63
PTGDR-202ENST00000553372 CECR2Q9BXF3 1484 aa43.9■■■■■ 4.62
PTGDR-202ENST00000553372 EIF4G1Q04637 1599 aaKnown RBP43.79■■■■■ 4.6
PTGDR-202ENST00000553372 DNAJC5Q9H3Z4 198 aa42.57■■■■■ 4.41
PTGDR-202ENST00000553372 NCAPD3P42695 1498 aa42.31■■■■■ 4.36
PTGDR-202ENST00000553372 CUX2O14529 1486 aa42.19■■■■■ 4.34
PTGDR-202ENST00000553372 ERCC6Q03468 1493 aa42.09■■■■■ 4.33
PTGDR-202ENST00000553372 ATAD2BQ9ULI0 1458 aa42.08■■■■■ 4.33
PTGDR-202ENST00000553372 SMARCA2P51531 1590 aa42■■■■■ 4.31
PTGDR-202ENST00000553372 HMGXB3Q12766 1538 aa41.95■■■■■ 4.31
PTGDR-202ENST00000553372 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
PTGDR-202ENST00000553372 BAZ1AQ9NRL2 1556 aaPredicted RBP41.71■■■■■ 4.27
PTGDR-202ENST00000553372 BAZ1BQ9UIG0 1483 aaKnown RBP41.66■■■■■ 4.26
PTGDR-202ENST00000553372 NESP48681 1621 aa41.66■■■■■ 4.26
PTGDR-202ENST00000553372 PEG3Q9GZU2 1588 aa41.59■■■■■ 4.25
PTGDR-202ENST00000553372 LAMC3Q9Y6N6 1575 aa41.42■■■■■ 4.22
PTGDR-202ENST00000553372 THOC2Q8NI27 1593 aaKnown RBP41.36■■■■■ 4.21
PTGDR-202ENST00000553372 MROH2BQ7Z745 1585 aa41.3■■■■■ 4.2
PTGDR-202ENST00000553372 PDS5BQ9NTI5 1447 aa41.21■■■■■ 4.19
PTGDR-202ENST00000553372 KIF21AQ7Z4S6 1674 aa41.15■■■■■ 4.18
PTGDR-202ENST00000553372 CADPSQ9ULU8 1353 aa40.99■■■■■ 4.15
PTGDR-202ENST00000553372 MRC2Q9UBG0 1479 aa40.83■■■■■ 4.13
PTGDR-202ENST00000553372 WIZO95785 1651 aa40.79■■■■■ 4.12
PTGDR-202ENST00000553372 WDR62O43379 1518 aa40.74■■■■■ 4.11
PTGDR-202ENST00000553372 CEP164Q9UPV0 1460 aa40.6■■■■■ 4.09
PTGDR-202ENST00000553372 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
PTGDR-202ENST00000553372 TRIM41Q8WV44 630 aa40.47■■■■■ 4.07
PTGDR-202ENST00000553372 CFTRP13569 1480 aa40.44■■■■■ 4.06
PTGDR-202ENST00000553372 RSF1Q96T23 1441 aaPredicted RBP40.33■■■■■ 4.05
PTGDR-202ENST00000553372 TOP2AP11388 1531 aaKnown RBP40.3■■■■■ 4.04
PTGDR-202ENST00000553372 OSCARQ8IYS5 282 aa40.2■■■■■ 4.03
PTGDR-202ENST00000553372 URB2Q14146 1524 aaKnown RBP40.16■■■■■ 4.02
PTGDR-202ENST00000553372 PRDM2Q13029 1718 aa40.04■■■■■ 4
PTGDR-202ENST00000553372 CCDC88BA6NC98 1476 aa39.81■■■■□ 3.96
PTGDR-202ENST00000553372 IFT140Q96RY7 1462 aa39.81■■■■□ 3.96
PTGDR-202ENST00000553372 ZNF608Q9ULD9 1512 aaPredicted RBP39.7■■■■□ 3.95
PTGDR-202ENST00000553372 ABCC8Q09428 1581 aa39.68■■■■□ 3.94
PTGDR-202ENST00000553372 TOPBP1Q92547 1522 aa39.68■■■■□ 3.94
PTGDR-202ENST00000553372 RIMBP3CA6NJZ7 1639 aa39.65■■■■□ 3.94
PTGDR-202ENST00000553372 RIMBP3BA6NNM3 1639 aa39.65■■■■□ 3.94
PTGDR-202ENST00000553372 RIMBP3Q9UFD9 1639 aa39.65■■■■□ 3.94
PTGDR-202ENST00000553372 DNMBPQ6XZF7 1577 aa39.53■■■■□ 3.92
PTGDR-202ENST00000553372 EIF4G3O43432 1585 aaKnown RBP39.5■■■■□ 3.91
PTGDR-202ENST00000553372 ARHGEF11O15085 1522 aa39.49■■■■□ 3.91
PTGDR-202ENST00000553372 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
PTGDR-202ENST00000553372 AQRO60306 1485 aaKnown RBP eCLIP39.31■■■■□ 3.88
PTGDR-202ENST00000553372 CHD1O14646 1710 aa39.29■■■■□ 3.88
PTGDR-202ENST00000553372 POLA1P09884 1462 aaPredicted RBP39.25■■■■□ 3.87
PTGDR-202ENST00000553372 CYB5RLQ6IPT4 315 aa39.23■■■■□ 3.87
PTGDR-202ENST00000553372 FBLN2P98095 1184 aa39.15■■■■□ 3.86
PTGDR-202ENST00000553372 SOGA1O94964 1423 aa39.09■■■■□ 3.85
PTGDR-202ENST00000553372 SUPT5HO00267 1087 aaKnown RBP39.08■■■■□ 3.85
PTGDR-202ENST00000553372 RAD54L2Q9Y4B4 1467 aa39.07■■■■□ 3.85
PTGDR-202ENST00000553372 ARAP1Q96P48 1450 aa39.05■■■■□ 3.84
PTGDR-202ENST00000553372 WDR97A6NE52 1622 aa39.04■■■■□ 3.84
PTGDR-202ENST00000553372 TDRD9Q8NDG6 1382 aaKnown RBP39.01■■■■□ 3.84
PTGDR-202ENST00000553372 FGD5Q6ZNL6 1462 aa38.94■■■■□ 3.82
PTGDR-202ENST00000553372 TRHP20396 242 aaPredicted RBP38.93■■■■□ 3.82
PTGDR-202ENST00000553372 SNAPC4Q5SXM2 1469 aa38.92■■■■□ 3.82
PTGDR-202ENST00000553372 MAGI1Q96QZ7 1491 aaPredicted RBP38.86■■■■□ 3.81
PTGDR-202ENST00000553372 CHMP7Q8WUX9 453 aaPredicted RBP38.85■■■■□ 3.81
PTGDR-202ENST00000553372 CUX1P39880 1505 aa38.84■■■■□ 3.81
PTGDR-202ENST00000553372 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
PTGDR-202ENST00000553372 SYNJ1O43426 1573 aa38.82■■■■□ 3.81
PTGDR-202ENST00000553372 GRIN2BQ13224 1484 aa38.81■■■■□ 3.8
PTGDR-202ENST00000553372 SYNJ2O15056 1496 aa38.73■■■■□ 3.79
PTGDR-202ENST00000553372 GAPVD1Q14C86 1478 aa38.61■■■■□ 3.77
PTGDR-202ENST00000553372 PBRM1Q86U86 1689 aa38.61■■■■□ 3.77
PTGDR-202ENST00000553372 ABCA10Q8WWZ4 1543 aa38.52■■■■□ 3.76
PTGDR-202ENST00000553372 ABCA5Q8WWZ7 1642 aa38.47■■■■□ 3.75
PTGDR-202ENST00000553372 WRNQ14191 1432 aaPredicted RBP eCLIP38.3■■■■□ 3.72
PTGDR-202ENST00000553372 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
PTGDR-202ENST00000553372 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
PTGDR-202ENST00000553372 NUP160Q12769 1436 aa38.19■■■■□ 3.7
PTGDR-202ENST00000553372 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
PTGDR-202ENST00000553372 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
PTGDR-202ENST00000553372 CEP170Q5SW79 1584 aa38.14■■■■□ 3.7
PTGDR-202ENST00000553372 ERCC6L2Q5T890 1561 aa38.13■■■■□ 3.69
PTGDR-202ENST00000553372 FHAD1B1AJZ9 1412 aa38.12■■■■□ 3.69
PTGDR-202ENST00000553372 AEBP2Q6ZN18 517 aaPredicted RBP38.11■■■■□ 3.69
PTGDR-202ENST00000553372 SHROOM2Q13796 1616 aa38.06■■■■□ 3.68
PTGDR-202ENST00000553372 ERICH3Q5RHP9 1530 aa38.05■■■■□ 3.68
PTGDR-202ENST00000553372 PRG4Q92954 1404 aaPredicted RBP37.83■■■■□ 3.65
PTGDR-202ENST00000553372 JPH4Q96JJ6 628 aa37.81■■■■□ 3.64
PTGDR-202ENST00000553372 KIF13AQ9H1H9 1805 aa37.75■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms