RNA–Protein interactions for RNA: ENST00000481533.5

SMIM29-207, Transcript of small integral membrane protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM29, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-207ENST00000481533 NISCHQ9Y2I1 1504 aa54.91■■■■■ 6.38
SMIM29-207ENST00000481533 CCDC180Q9P1Z9 1646 aa49.01■■■■■ 5.44
SMIM29-207ENST00000481533 ABCC9O60706 1549 aa48.57■■■■■ 5.37
SMIM29-207ENST00000481533 RB1CC1Q8TDY2 1594 aa46.41■■■■■ 5.02
SMIM29-207ENST00000481533 DCAF8L2P0C7V8 631 aa46.33■■■■■ 5.01
SMIM29-207ENST00000481533 NACADO15069 1562 aa46.18■■■■■ 4.98
SMIM29-207ENST00000481533 ZCCHC6Q5VYS8 1495 aaKnown RBP45.64■■■■■ 4.9
SMIM29-207ENST00000481533 MYO15BQ96JP2 1530 aa45.63■■■■■ 4.9
SMIM29-207ENST00000481533 UNC13AQ9UPW8 1703 aa45.38■■■■■ 4.86
SMIM29-207ENST00000481533 PABPN1Q86U42 306 aaKnown RBP eCLIP45.32■■■■■ 4.85
SMIM29-207ENST00000481533 DCAF1Q9Y4B6 1507 aa45.3■■■■■ 4.84
SMIM29-207ENST00000481533 BICRAQ9NZM4 1560 aa44.99■■■■■ 4.79
SMIM29-207ENST00000481533 DNAJC5BQ9UF47 199 aa44.9■■■■■ 4.78
SMIM29-207ENST00000481533 SCRIBQ14160 1630 aa44.86■■■■■ 4.77
SMIM29-207ENST00000481533 SHROOM4Q9ULL8 1493 aa44.36■■■■■ 4.69
SMIM29-207ENST00000481533 EIF4G1Q04637 1599 aaKnown RBP43.88■■■■■ 4.61
SMIM29-207ENST00000481533 CC2D2AQ9P2K1 1620 aa43.84■■■■■ 4.61
SMIM29-207ENST00000481533 CECR2Q9BXF3 1484 aa43.63■■■■■ 4.57
SMIM29-207ENST00000481533 SMARCA4P51532 1647 aa42.75■■■■■ 4.43
SMIM29-207ENST00000481533 BAZ1AQ9NRL2 1556 aaPredicted RBP42.61■■■■■ 4.41
SMIM29-207ENST00000481533 ATAD2BQ9ULI0 1458 aa42.6■■■■■ 4.41
SMIM29-207ENST00000481533 NCAPD3P42695 1498 aa42.58■■■■■ 4.41
SMIM29-207ENST00000481533 SMARCA2P51531 1590 aa42.54■■■■■ 4.4
SMIM29-207ENST00000481533 HMGXB3Q12766 1538 aa42.37■■■■■ 4.37
SMIM29-207ENST00000481533 MROH2BQ7Z745 1585 aa42.37■■■■■ 4.37
SMIM29-207ENST00000481533 BAZ1BQ9UIG0 1483 aaKnown RBP42.3■■■■■ 4.36
SMIM29-207ENST00000481533 PEG3Q9GZU2 1588 aa42.22■■■■■ 4.35
SMIM29-207ENST00000481533 WIZO95785 1651 aa41.93■■■■■ 4.3
SMIM29-207ENST00000481533 ERCC6Q03468 1493 aa41.92■■■■■ 4.3
SMIM29-207ENST00000481533 NESP48681 1621 aa41.87■■■■■ 4.29
SMIM29-207ENST00000481533 RSF1Q96T23 1441 aaPredicted RBP41.68■■■■■ 4.26
SMIM29-207ENST00000481533 LAMC3Q9Y6N6 1575 aa41.59■■■■■ 4.25
SMIM29-207ENST00000481533 CUX2O14529 1486 aa41.49■■■■■ 4.23
SMIM29-207ENST00000481533 TOP2AP11388 1531 aaKnown RBP41.4■■■■■ 4.22
SMIM29-207ENST00000481533 CADPSQ9ULU8 1353 aa41.37■■■■■ 4.21
SMIM29-207ENST00000481533 KIF21AQ7Z4S6 1674 aa41.36■■■■■ 4.21
SMIM29-207ENST00000481533 PDS5BQ9NTI5 1447 aa41.35■■■■■ 4.21
SMIM29-207ENST00000481533 THOC2Q8NI27 1593 aaKnown RBP41.27■■■■■ 4.2
SMIM29-207ENST00000481533 CFTRP13569 1480 aa41.01■■■■■ 4.16
SMIM29-207ENST00000481533 MRC2Q9UBG0 1479 aa40.98■■■■■ 4.15
SMIM29-207ENST00000481533 CEP164Q9UPV0 1460 aa40.97■■■■■ 4.15
SMIM29-207ENST00000481533 FANCD2Q9BXW9 1451 aa40.96■■■■■ 4.15
SMIM29-207ENST00000481533 CCDC88BA6NC98 1476 aa40.92■■■■■ 4.14
SMIM29-207ENST00000481533 WDR62O43379 1518 aa40.82■■■■■ 4.12
SMIM29-207ENST00000481533 DNAJC5Q9H3Z4 198 aa40.76■■■■■ 4.12
SMIM29-207ENST00000481533 PRDM2Q13029 1718 aa40.73■■■■■ 4.11
SMIM29-207ENST00000481533 URB2Q14146 1524 aaKnown RBP40.57■■■■■ 4.09
SMIM29-207ENST00000481533 SUPT5HO00267 1087 aaKnown RBP40.49■■■■■ 4.07
SMIM29-207ENST00000481533 TOPBP1Q92547 1522 aa40.24■■■■■ 4.03
SMIM29-207ENST00000481533 DNMBPQ6XZF7 1577 aa40.15■■■■■ 4.02
SMIM29-207ENST00000481533 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
SMIM29-207ENST00000481533 IFT140Q96RY7 1462 aa40.08■■■■■ 4.01
SMIM29-207ENST00000481533 ZNF608Q9ULD9 1512 aaPredicted RBP40■■■■□ 3.99
SMIM29-207ENST00000481533 POLA1P09884 1462 aaPredicted RBP39.87■■■■□ 3.97
SMIM29-207ENST00000481533 EIF4G3O43432 1585 aaKnown RBP39.83■■■■□ 3.97
SMIM29-207ENST00000481533 TARBP1Q13395 1621 aaKnown RBP39.81■■■■□ 3.96
SMIM29-207ENST00000481533 CUX1P39880 1505 aa39.77■■■■□ 3.96
SMIM29-207ENST00000481533 RAD54L2Q9Y4B4 1467 aa39.75■■■■□ 3.95
SMIM29-207ENST00000481533 OSCARQ8IYS5 282 aa39.74■■■■□ 3.95
SMIM29-207ENST00000481533 FGD5Q6ZNL6 1462 aa39.74■■■■□ 3.95
SMIM29-207ENST00000481533 AQRO60306 1485 aaKnown RBP eCLIP39.72■■■■□ 3.952e-7■■■■■ 56.2
SMIM29-207ENST00000481533 SOGA1O94964 1423 aa39.71■■■■□ 3.95
SMIM29-207ENST00000481533 TDRD9Q8NDG6 1382 aaKnown RBP39.59■■■■□ 3.93
SMIM29-207ENST00000481533 FBLN2P98095 1184 aa39.46■■■■□ 3.91
SMIM29-207ENST00000481533 TRIM41Q8WV44 630 aa39.45■■■■□ 3.91
SMIM29-207ENST00000481533 CHD1O14646 1710 aa39.45■■■■□ 3.91
SMIM29-207ENST00000481533 WDR97A6NE52 1622 aa39.4■■■■□ 3.9
SMIM29-207ENST00000481533 WRNQ14191 1432 aaPredicted RBP eCLIP39.36■■■■□ 3.89
SMIM29-207ENST00000481533 SNAPC4Q5SXM2 1469 aa39.36■■■■□ 3.89
SMIM29-207ENST00000481533 SYNJ1O43426 1573 aa39.3■■■■□ 3.88
SMIM29-207ENST00000481533 GRIN2BQ13224 1484 aa39.29■■■■□ 3.88
SMIM29-207ENST00000481533 TOP2BQ02880 1626 aa39.29■■■■□ 3.88
SMIM29-207ENST00000481533 BIVM-ERCC5R4GMW8 1640 aa39.29■■■■□ 3.88
SMIM29-207ENST00000481533 ABCA10Q8WWZ4 1543 aa39.25■■■■□ 3.87
SMIM29-207ENST00000481533 GAPVD1Q14C86 1478 aa39.24■■■■□ 3.87
SMIM29-207ENST00000481533 PBRM1Q86U86 1689 aa39.24■■■■□ 3.87
SMIM29-207ENST00000481533 MAGI1Q96QZ7 1491 aaPredicted RBP39.2■■■■□ 3.87
SMIM29-207ENST00000481533 RIMBP3CA6NJZ7 1639 aa39.2■■■■□ 3.87
SMIM29-207ENST00000481533 RIMBP3BA6NNM3 1639 aa39.2■■■■□ 3.87
SMIM29-207ENST00000481533 RIMBP3Q9UFD9 1639 aa39.2■■■■□ 3.87
SMIM29-207ENST00000481533 CHMP7Q8WUX9 453 aaPredicted RBP39.18■■■■□ 3.86
SMIM29-207ENST00000481533 ABCA5Q8WWZ7 1642 aa39.17■■■■□ 3.86
SMIM29-207ENST00000481533 ARHGEF11O15085 1522 aa39.11■■■■□ 3.85
SMIM29-207ENST00000481533 SYNJ2O15056 1496 aa39.08■■■■□ 3.85
SMIM29-207ENST00000481533 CLASP1Q7Z460 1538 aa38.9■■■■□ 3.82
SMIM29-207ENST00000481533 ADAMTS12P58397 1594 aa38.87■■■■□ 3.81
SMIM29-207ENST00000481533 CYB5RLQ6IPT4 315 aa38.84■■■■□ 3.81
SMIM29-207ENST00000481533 GRIN2AQ12879 1464 aa38.79■■■■□ 3.8
SMIM29-207ENST00000481533 ERICH3Q5RHP9 1530 aa38.78■■■■□ 3.8
SMIM29-207ENST00000481533 ARAP1Q96P48 1450 aa38.77■■■■□ 3.8
SMIM29-207ENST00000481533 FHAD1B1AJZ9 1412 aa38.74■■■■□ 3.79
SMIM29-207ENST00000481533 CEP170Q5SW79 1584 aa38.64■■■■□ 3.78
SMIM29-207ENST00000481533 NUP160Q12769 1436 aa38.57■■■■□ 3.77
SMIM29-207ENST00000481533 KIF27Q86VH2 1401 aa38.56■■■■□ 3.76
SMIM29-207ENST00000481533 ERCC6L2Q5T890 1561 aa38.42■■■■□ 3.74
SMIM29-207ENST00000481533 IGF1RP08069 1367 aa38.41■■■■□ 3.74
SMIM29-207ENST00000481533 CUL7Q14999 1698 aa38.38■■■■□ 3.73
SMIM29-207ENST00000481533 SHROOM2Q13796 1616 aa38.34■■■■□ 3.73
SMIM29-207ENST00000481533 RUSC2Q8N2Y8 1516 aa38.3■■■■□ 3.72
SMIM29-207ENST00000481533 TRHP20396 242 aaPredicted RBP38.3■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms