Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.53■□□□□ 0.56
C3orf56Q8N813 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C3orf56Q8N813 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
C3orf56Q8N813 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
C3orf56Q8N813 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.52■□□□□ 0.56
C3orf56Q8N813 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.52■□□□□ 0.56
C3orf56Q8N813 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.52■□□□□ 0.56
C3orf56Q8N813 AL031432.3-201ENST00000607698 485 ntBASIC18.52■□□□□ 0.56
C3orf56Q8N813 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
C3orf56Q8N813 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C3orf56Q8N813 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.51■□□□□ 0.55
C3orf56Q8N813 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.51■□□□□ 0.55
C3orf56Q8N813 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C3orf56Q8N813 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
C3orf56Q8N813 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C3orf56Q8N813 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
C3orf56Q8N813 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C3orf56Q8N813 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
C3orf56Q8N813 AC024257.2-201ENST00000549699 147 ntBASIC18.5■□□□□ 0.55
C3orf56Q8N813 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.5■□□□□ 0.55
C3orf56Q8N813 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C3orf56Q8N813 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.5■□□□□ 0.55
C3orf56Q8N813 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C3orf56Q8N813 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.49■□□□□ 0.55
C3orf56Q8N813 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.49■□□□□ 0.55
C3orf56Q8N813 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C3orf56Q8N813 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C3orf56Q8N813 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
C3orf56Q8N813 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
C3orf56Q8N813 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.48■□□□□ 0.55
C3orf56Q8N813 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
C3orf56Q8N813 MIR6821-201ENST00000617625 74 ntBASIC18.48■□□□□ 0.55
C3orf56Q8N813 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
C3orf56Q8N813 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C3orf56Q8N813 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C3orf56Q8N813 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C3orf56Q8N813 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C3orf56Q8N813 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.47■□□□□ 0.55
C3orf56Q8N813 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
C3orf56Q8N813 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C3orf56Q8N813 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
C3orf56Q8N813 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.46■□□□□ 0.55
C3orf56Q8N813 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
C3orf56Q8N813 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
C3orf56Q8N813 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.46■□□□□ 0.55
C3orf56Q8N813 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
C3orf56Q8N813 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
C3orf56Q8N813 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C3orf56Q8N813 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
C3orf56Q8N813 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C3orf56Q8N813 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C3orf56Q8N813 AL449106.1-201ENST00000608517 1980 ntBASIC18.45■□□□□ 0.54
C3orf56Q8N813 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C3orf56Q8N813 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.45■□□□□ 0.54
C3orf56Q8N813 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.45■□□□□ 0.54
C3orf56Q8N813 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C3orf56Q8N813 AF213884.3-201ENST00000563833 479 ntBASIC18.45■□□□□ 0.54
C3orf56Q8N813 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
C3orf56Q8N813 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C3orf56Q8N813 AC097381.1-201ENST00000429019 1296 ntBASIC18.44■□□□□ 0.54
C3orf56Q8N813 AC004448.1-201ENST00000458332 883 ntBASIC18.44■□□□□ 0.54
C3orf56Q8N813 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.44■□□□□ 0.54
C3orf56Q8N813 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C3orf56Q8N813 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C3orf56Q8N813 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
C3orf56Q8N813 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C3orf56Q8N813 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C3orf56Q8N813 AL162430.1-201ENST00000480705 870 ntBASIC18.43■□□□□ 0.54
C3orf56Q8N813 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.43■□□□□ 0.54
C3orf56Q8N813 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
C3orf56Q8N813 AL136967.2-201ENST00000623968 743 ntBASIC18.43■□□□□ 0.54
C3orf56Q8N813 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C3orf56Q8N813 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C3orf56Q8N813 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C3orf56Q8N813 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C3orf56Q8N813 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C3orf56Q8N813 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms