RNA–Protein interactions for RNA: ENST00000253407.3

C1QL1-201, Transcript of complement C1q like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1QL1, Length 1,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QL1-201ENST00000253407 NISCHQ9Y2I1 1504 aa53.63■■■■■ 6.18
C1QL1-201ENST00000253407 ABCC9O60706 1549 aa49.5■■■■■ 5.52
C1QL1-201ENST00000253407 CCDC180Q9P1Z9 1646 aa48.52■■■■■ 5.36
C1QL1-201ENST00000253407 DNAJC5BQ9UF47 199 aa47.27■■■■■ 5.16
C1QL1-201ENST00000253407 RB1CC1Q8TDY2 1594 aa46.66■■■■■ 5.06
C1QL1-201ENST00000253407 NACADO15069 1562 aa46.09■■■■■ 4.97
C1QL1-201ENST00000253407 PABPN1Q86U42 306 aaKnown RBP eCLIP45.96■■■■■ 4.95
C1QL1-201ENST00000253407 DCAF8L2P0C7V8 631 aa45.76■■■■■ 4.92
C1QL1-201ENST00000253407 UNC13AQ9UPW8 1703 aa45.62■■■■■ 4.89
C1QL1-201ENST00000253407 BICRAQ9NZM4 1560 aa45.34■■■■■ 4.85
C1QL1-201ENST00000253407 MYO15BQ96JP2 1530 aa45.11■■■■■ 4.81
C1QL1-201ENST00000253407 CECR2Q9BXF3 1484 aa44.67■■■■■ 4.74
C1QL1-201ENST00000253407 CC2D2AQ9P2K1 1620 aa44.64■■■■■ 4.74
C1QL1-201ENST00000253407 SHROOM4Q9ULL8 1493 aa44.59■■■■■ 4.73
C1QL1-201ENST00000253407 EIF4G1Q04637 1599 aaKnown RBP44.31■■■■■ 4.68
C1QL1-201ENST00000253407 ZCCHC6Q5VYS8 1495 aaKnown RBP44.24■■■■■ 4.67
C1QL1-201ENST00000253407 SCRIBQ14160 1630 aa44.21■■■■■ 4.67
C1QL1-201ENST00000253407 DCAF1Q9Y4B6 1507 aa44.2■■■■■ 4.67
C1QL1-201ENST00000253407 DNAJC5Q9H3Z4 198 aa44.07■■■■■ 4.65
C1QL1-201ENST00000253407 CUX2O14529 1486 aa43■■■■■ 4.47
C1QL1-201ENST00000253407 ERCC6Q03468 1493 aa42.81■■■■■ 4.44
C1QL1-201ENST00000253407 NCAPD3P42695 1498 aa42.57■■■■■ 4.41
C1QL1-201ENST00000253407 ATAD2BQ9ULI0 1458 aa42.32■■■■■ 4.37
C1QL1-201ENST00000253407 NESP48681 1621 aa42.25■■■■■ 4.35
C1QL1-201ENST00000253407 HMGXB3Q12766 1538 aa42.16■■■■■ 4.34
C1QL1-201ENST00000253407 SMARCA2P51531 1590 aa42.14■■■■■ 4.34
C1QL1-201ENST00000253407 SMARCA4P51532 1647 aa42.05■■■■■ 4.32
C1QL1-201ENST00000253407 THOC2Q8NI27 1593 aaKnown RBP41.98■■■■■ 4.31
C1QL1-201ENST00000253407 BAZ1BQ9UIG0 1483 aaKnown RBP41.88■■■■■ 4.29
C1QL1-201ENST00000253407 TRIM41Q8WV44 630 aa41.81■■■■■ 4.28
C1QL1-201ENST00000253407 LAMC3Q9Y6N6 1575 aa41.76■■■■■ 4.28
C1QL1-201ENST00000253407 BAZ1AQ9NRL2 1556 aaPredicted RBP41.69■■■■■ 4.26
C1QL1-201ENST00000253407 KIF21AQ7Z4S6 1674 aa41.67■■■■■ 4.26
C1QL1-201ENST00000253407 PEG3Q9GZU2 1588 aa41.61■■■■■ 4.25
C1QL1-201ENST00000253407 PDS5BQ9NTI5 1447 aa41.57■■■■■ 4.25
C1QL1-201ENST00000253407 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
C1QL1-201ENST00000253407 MRC2Q9UBG0 1479 aa41.28■■■■■ 4.2
C1QL1-201ENST00000253407 CADPSQ9ULU8 1353 aa41.25■■■■■ 4.19
C1QL1-201ENST00000253407 WDR62O43379 1518 aa41.19■■■■■ 4.18
C1QL1-201ENST00000253407 CEP164Q9UPV0 1460 aa40.93■■■■■ 4.14
C1QL1-201ENST00000253407 OSCARQ8IYS5 282 aa40.91■■■■■ 4.14
C1QL1-201ENST00000253407 WIZO95785 1651 aa40.81■■■■■ 4.12
C1QL1-201ENST00000253407 FANCD2Q9BXW9 1451 aa40.8■■■■■ 4.12
C1QL1-201ENST00000253407 CFTRP13569 1480 aa40.58■■■■■ 4.09
C1QL1-201ENST00000253407 URB2Q14146 1524 aaKnown RBP40.52■■■■■ 4.08
C1QL1-201ENST00000253407 RIMBP3CA6NJZ7 1639 aa40.49■■■■■ 4.07
C1QL1-201ENST00000253407 RIMBP3BA6NNM3 1639 aa40.49■■■■■ 4.07
C1QL1-201ENST00000253407 RIMBP3Q9UFD9 1639 aa40.49■■■■■ 4.07
C1QL1-201ENST00000253407 ARHGEF11O15085 1522 aa40.26■■■■■ 4.03
C1QL1-201ENST00000253407 TOP2AP11388 1531 aaKnown RBP40.2■■■■■ 4.03
C1QL1-201ENST00000253407 ZNF608Q9ULD9 1512 aaPredicted RBP40.19■■■■■ 4.02
C1QL1-201ENST00000253407 IFT140Q96RY7 1462 aa40.13■■■■■ 4.02
C1QL1-201ENST00000253407 RSF1Q96T23 1441 aaPredicted RBP40.13■■■■■ 4.01
C1QL1-201ENST00000253407 PRDM2Q13029 1718 aa40.08■■■■■ 4.01
C1QL1-201ENST00000253407 CYB5RLQ6IPT4 315 aa40.05■■■■■ 4
C1QL1-201ENST00000253407 TRHP20396 242 aaPredicted RBP39.92■■■■□ 3.98
C1QL1-201ENST00000253407 TOPBP1Q92547 1522 aa39.91■■■■□ 3.98
C1QL1-201ENST00000253407 EIF4G3O43432 1585 aaKnown RBP39.91■■■■□ 3.98
C1QL1-201ENST00000253407 CHD1O14646 1710 aa39.8■■■■□ 3.96
C1QL1-201ENST00000253407 ARAP1Q96P48 1450 aa39.8■■■■□ 3.96
C1QL1-201ENST00000253407 CCDC88BA6NC98 1476 aa39.77■■■■□ 3.96
C1QL1-201ENST00000253407 ABCC8Q09428 1581 aa39.74■■■■□ 3.95
C1QL1-201ENST00000253407 AQRO60306 1485 aaKnown RBP eCLIP39.71■■■■□ 3.95
C1QL1-201ENST00000253407 FBLN2P98095 1184 aa39.68■■■■□ 3.94
C1QL1-201ENST00000253407 DNMBPQ6XZF7 1577 aa39.67■■■■□ 3.94
C1QL1-201ENST00000253407 TARBP1Q13395 1621 aaKnown RBP39.63■■■■□ 3.93
C1QL1-201ENST00000253407 POLA1P09884 1462 aaPredicted RBP39.45■■■■□ 3.91
C1QL1-201ENST00000253407 AEBP2Q6ZN18 517 aaPredicted RBP39.45■■■■□ 3.91
C1QL1-201ENST00000253407 RAD54L2Q9Y4B4 1467 aa39.35■■■■□ 3.89
C1QL1-201ENST00000253407 TDRD9Q8NDG6 1382 aaKnown RBP39.33■■■■□ 3.89
C1QL1-201ENST00000253407 CLASP1Q7Z460 1538 aa39.3■■■■□ 3.88
C1QL1-201ENST00000253407 SNAPC4Q5SXM2 1469 aa39.27■■■■□ 3.88
C1QL1-201ENST00000253407 SOGA1O94964 1423 aa39.26■■■■□ 3.88
C1QL1-201ENST00000253407 CHMP7Q8WUX9 453 aaPredicted RBP39.2■■■■□ 3.87
C1QL1-201ENST00000253407 SYNJ1O43426 1573 aa39.2■■■■□ 3.87
C1QL1-201ENST00000253407 WDR97A6NE52 1622 aa39.12■■■■□ 3.85
C1QL1-201ENST00000253407 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
C1QL1-201ENST00000253407 FGD5Q6ZNL6 1462 aa39.08■■■■□ 3.85
C1QL1-201ENST00000253407 GRIN2BQ13224 1484 aa39.02■■■■□ 3.84
C1QL1-201ENST00000253407 SYNJ2O15056 1496 aa38.99■■■■□ 3.83
C1QL1-201ENST00000253407 GAPVD1Q14C86 1478 aa38.97■■■■□ 3.83
C1QL1-201ENST00000253407 CUX1P39880 1505 aa38.89■■■■□ 3.82
C1QL1-201ENST00000253407 SUPT5HO00267 1087 aaKnown RBP38.85■■■■□ 3.81
C1QL1-201ENST00000253407 PBRM1Q86U86 1689 aa38.81■■■■□ 3.8
C1QL1-201ENST00000253407 ERCC6L2Q5T890 1561 aa38.65■■■■□ 3.78
C1QL1-201ENST00000253407 ABCA5Q8WWZ7 1642 aa38.6■■■■□ 3.77
C1QL1-201ENST00000253407 ABCA10Q8WWZ4 1543 aa38.55■■■■□ 3.76
C1QL1-201ENST00000253407 GRIN2AQ12879 1464 aa38.52■■■■□ 3.76
C1QL1-201ENST00000253407 CEP170Q5SW79 1584 aa38.49■■■■□ 3.75
C1QL1-201ENST00000253407 NUP160Q12769 1436 aa38.41■■■■□ 3.74
C1QL1-201ENST00000253407 KIF13AQ9H1H9 1805 aa38.38■■■■□ 3.73
C1QL1-201ENST00000253407 ADAMTS12P58397 1594 aa38.38■■■■□ 3.73
C1QL1-201ENST00000253407 SHROOM2Q13796 1616 aa38.35■■■■□ 3.73
C1QL1-201ENST00000253407 WRNQ14191 1432 aaPredicted RBP eCLIP38.23■■■■□ 3.71
C1QL1-201ENST00000253407 FHAD1B1AJZ9 1412 aa38.22■■■■□ 3.71
C1QL1-201ENST00000253407 PRG4Q92954 1404 aaPredicted RBP38.15■■■■□ 3.7
C1QL1-201ENST00000253407 FAM69CQ0P6D2 419 aa38.1■■■■□ 3.69
C1QL1-201ENST00000253407 ABCC10Q5T3U5 1492 aa38.05■■■■□ 3.68
C1QL1-201ENST00000253407 ERICH3Q5RHP9 1530 aa38.05■■■■□ 3.68
C1QL1-201ENST00000253407 JPH4Q96JJ6 628 aa38.03■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms