RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 NISCHQ9Y2I1 1504 aa55.57■■■■■ 6.49
SHISA9-205ENST00000639941 CCDC180Q9P1Z9 1646 aa49.52■■■■■ 5.52
SHISA9-205ENST00000639941 ABCC9O60706 1549 aa48.83■■■■■ 5.41
SHISA9-205ENST00000639941 RB1CC1Q8TDY2 1594 aa46.76■■■■■ 5.08
SHISA9-205ENST00000639941 NACADO15069 1562 aa46.63■■■■■ 5.06
SHISA9-205ENST00000639941 DCAF8L2P0C7V8 631 aa46.48■■■■■ 5.03
SHISA9-205ENST00000639941 ZCCHC6Q5VYS8 1495 aaKnown RBP46.24■■■■■ 4.99
SHISA9-205ENST00000639941 MYO15BQ96JP2 1530 aa46.23■■■■■ 4.99
SHISA9-205ENST00000639941 DCAF1Q9Y4B6 1507 aa45.93■■■■■ 4.94
SHISA9-205ENST00000639941 UNC13AQ9UPW8 1703 aa45.83■■■■■ 4.93
SHISA9-205ENST00000639941 PABPN1Q86U42 306 aaKnown RBP eCLIP45.58■■■■■ 4.89
SHISA9-205ENST00000639941 BICRAQ9NZM4 1560 aa45.48■■■■■ 4.87
SHISA9-205ENST00000639941 SCRIBQ14160 1630 aa45.22■■■■■ 4.83
SHISA9-205ENST00000639941 DNAJC5BQ9UF47 199 aa45.21■■■■■ 4.83
SHISA9-205ENST00000639941 SHROOM4Q9ULL8 1493 aa44.82■■■■■ 4.77
SHISA9-205ENST00000639941 EIF4G1Q04637 1599 aaKnown RBP44.25■■■■■ 4.67
SHISA9-205ENST00000639941 CC2D2AQ9P2K1 1620 aa44.17■■■■■ 4.66
SHISA9-205ENST00000639941 CECR2Q9BXF3 1484 aa43.89■■■■■ 4.62
SHISA9-205ENST00000639941 SMARCA4P51532 1647 aa43.21■■■■■ 4.51
SHISA9-205ENST00000639941 ATAD2BQ9ULI0 1458 aa43.06■■■■■ 4.48
SHISA9-205ENST00000639941 BAZ1AQ9NRL2 1556 aaPredicted RBP43.05■■■■■ 4.48
SHISA9-205ENST00000639941 NCAPD3P42695 1498 aa43.05■■■■■ 4.48
SHISA9-205ENST00000639941 SMARCA2P51531 1590 aa42.92■■■■■ 4.46
SHISA9-205ENST00000639941 MROH2BQ7Z745 1585 aa42.86■■■■■ 4.45
SHISA9-205ENST00000639941 HMGXB3Q12766 1538 aa42.81■■■■■ 4.44
SHISA9-205ENST00000639941 PEG3Q9GZU2 1588 aa42.78■■■■■ 4.44
SHISA9-205ENST00000639941 BAZ1BQ9UIG0 1483 aaKnown RBP42.63■■■■■ 4.42
SHISA9-205ENST00000639941 WIZO95785 1651 aa42.39■■■■■ 4.38
SHISA9-205ENST00000639941 RSF1Q96T23 1441 aaPredicted RBP42.22■■■■■ 4.35
SHISA9-205ENST00000639941 NESP48681 1621 aa42.2■■■■■ 4.35
SHISA9-205ENST00000639941 ERCC6Q03468 1493 aa42.04■■■■■ 4.32
SHISA9-205ENST00000639941 LAMC3Q9Y6N6 1575 aa41.95■■■■■ 4.31
SHISA9-205ENST00000639941 TOP2AP11388 1531 aaKnown RBP41.87■■■■■ 4.29
SHISA9-205ENST00000639941 CADPSQ9ULU8 1353 aa41.76■■■■■ 4.28
SHISA9-205ENST00000639941 CUX2O14529 1486 aa41.73■■■■■ 4.27
SHISA9-205ENST00000639941 KIF21AQ7Z4S6 1674 aa41.68■■■■■ 4.26
SHISA9-205ENST00000639941 PDS5BQ9NTI5 1447 aa41.64■■■■■ 4.26
SHISA9-205ENST00000639941 THOC2Q8NI27 1593 aaKnown RBP41.63■■■■■ 4.26
SHISA9-205ENST00000639941 CFTRP13569 1480 aa41.47■■■■■ 4.23
SHISA9-205ENST00000639941 CCDC88BA6NC98 1476 aa41.4■■■■■ 4.22
SHISA9-205ENST00000639941 FANCD2Q9BXW9 1451 aa41.31■■■■■ 4.2
SHISA9-205ENST00000639941 MRC2Q9UBG0 1479 aa41.29■■■■■ 4.2
SHISA9-205ENST00000639941 CEP164Q9UPV0 1460 aa41.27■■■■■ 4.2
SHISA9-205ENST00000639941 WDR62O43379 1518 aa41.2■■■■■ 4.19
SHISA9-205ENST00000639941 PRDM2Q13029 1718 aa41.14■■■■■ 4.18
SHISA9-205ENST00000639941 URB2Q14146 1524 aaKnown RBP40.97■■■■■ 4.15
SHISA9-205ENST00000639941 DNAJC5Q9H3Z4 198 aa40.86■■■■■ 4.13
SHISA9-205ENST00000639941 SUPT5HO00267 1087 aaKnown RBP40.84■■■■■ 4.13
SHISA9-205ENST00000639941 TOPBP1Q92547 1522 aa40.62■■■■■ 4.09
SHISA9-205ENST00000639941 DNMBPQ6XZF7 1577 aa40.53■■■■■ 4.08
SHISA9-205ENST00000639941 ABCC8Q09428 1581 aa40.49■■■■■ 4.07
SHISA9-205ENST00000639941 IFT140Q96RY7 1462 aa40.4■■■■■ 4.06
SHISA9-205ENST00000639941 ZNF608Q9ULD9 1512 aaPredicted RBP40.35■■■■■ 4.05
SHISA9-205ENST00000639941 POLA1P09884 1462 aaPredicted RBP40.26■■■■■ 4.04
SHISA9-205ENST00000639941 TARBP1Q13395 1621 aaKnown RBP40.24■■■■■ 4.03
SHISA9-205ENST00000639941 CUX1P39880 1505 aa40.23■■■■■ 4.03
SHISA9-205ENST00000639941 EIF4G3O43432 1585 aaKnown RBP40.14■■■■■ 4.02
SHISA9-205ENST00000639941 RAD54L2Q9Y4B4 1467 aa40.13■■■■■ 4.01
SHISA9-205ENST00000639941 FGD5Q6ZNL6 1462 aa40.11■■■■■ 4.01
SHISA9-205ENST00000639941 SOGA1O94964 1423 aa40.05■■■■■ 4
SHISA9-205ENST00000639941 AQRO60306 1485 aaKnown RBP eCLIP40.05■■■■■ 4
SHISA9-205ENST00000639941 OSCARQ8IYS5 282 aa39.9■■■■□ 3.98
SHISA9-205ENST00000639941 TDRD9Q8NDG6 1382 aaKnown RBP39.89■■■■□ 3.98
SHISA9-205ENST00000639941 WDR97A6NE52 1622 aa39.84■■■■□ 3.97
SHISA9-205ENST00000639941 SYNJ1O43426 1573 aa39.77■■■■□ 3.96
SHISA9-205ENST00000639941 WRNQ14191 1432 aaPredicted RBP eCLIP39.77■■■■□ 3.96
SHISA9-205ENST00000639941 BIVM-ERCC5R4GMW8 1640 aa39.76■■■■□ 3.96
SHISA9-205ENST00000639941 TOP2BQ02880 1626 aa39.76■■■■□ 3.95
SHISA9-205ENST00000639941 CHD1O14646 1710 aa39.71■■■■□ 3.95
SHISA9-205ENST00000639941 ABCA10Q8WWZ4 1543 aa39.7■■■■□ 3.95
SHISA9-205ENST00000639941 SNAPC4Q5SXM2 1469 aa39.66■■■■□ 3.94
SHISA9-205ENST00000639941 GRIN2BQ13224 1484 aa39.62■■■■□ 3.93
SHISA9-205ENST00000639941 ABCA5Q8WWZ7 1642 aa39.61■■■■□ 3.93
SHISA9-205ENST00000639941 GAPVD1Q14C86 1478 aa39.59■■■■□ 3.93
SHISA9-205ENST00000639941 PBRM1Q86U86 1689 aa39.57■■■■□ 3.93
SHISA9-205ENST00000639941 MAGI1Q96QZ7 1491 aaPredicted RBP39.55■■■■□ 3.92
SHISA9-205ENST00000639941 FBLN2P98095 1184 aa39.54■■■■□ 3.92
SHISA9-205ENST00000639941 RIMBP3CA6NJZ7 1639 aa39.41■■■■□ 3.9
SHISA9-205ENST00000639941 RIMBP3BA6NNM3 1639 aa39.41■■■■□ 3.9
SHISA9-205ENST00000639941 RIMBP3Q9UFD9 1639 aa39.41■■■■□ 3.9
SHISA9-205ENST00000639941 SYNJ2O15056 1496 aa39.41■■■■□ 3.9
SHISA9-205ENST00000639941 TRIM41Q8WV44 630 aa39.38■■■■□ 3.89
SHISA9-205ENST00000639941 CHMP7Q8WUX9 453 aaPredicted RBP39.37■■■■□ 3.89
SHISA9-205ENST00000639941 ARHGEF11O15085 1522 aa39.35■■■■□ 3.89
SHISA9-205ENST00000639941 CLASP1Q7Z460 1538 aa39.28■■■■□ 3.88
SHISA9-205ENST00000639941 ADAMTS12P58397 1594 aa39.25■■■■□ 3.87
SHISA9-205ENST00000639941 ERICH3Q5RHP9 1530 aa39.19■■■■□ 3.86
SHISA9-205ENST00000639941 GRIN2AQ12879 1464 aa39.13■■■■□ 3.85
SHISA9-205ENST00000639941 FHAD1B1AJZ9 1412 aa39.1■■■■□ 3.85
SHISA9-205ENST00000639941 ARAP1Q96P48 1450 aa39.05■■■■□ 3.84
SHISA9-205ENST00000639941 CEP170Q5SW79 1584 aa39.01■■■■□ 3.84
SHISA9-205ENST00000639941 NUP160Q12769 1436 aa38.99■■■■□ 3.83
SHISA9-205ENST00000639941 CYB5RLQ6IPT4 315 aa38.96■■■■□ 3.83
SHISA9-205ENST00000639941 KIF27Q86VH2 1401 aa38.93■■■■□ 3.82
SHISA9-205ENST00000639941 IGF1RP08069 1367 aa38.88■■■■□ 3.81
SHISA9-205ENST00000639941 ERCC6L2Q5T890 1561 aa38.77■■■■□ 3.8
SHISA9-205ENST00000639941 CUL7Q14999 1698 aa38.76■■■■□ 3.8
SHISA9-205ENST00000639941 SHROOM2Q13796 1616 aa38.75■■■■□ 3.79
SHISA9-205ENST00000639941 RUSC2Q8N2Y8 1516 aa38.68■■■■□ 3.78
SHISA9-205ENST00000639941 CARMIL1Q5VZK9 1371 aa38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms