Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 LINC01124-201ENST00000409786 2117 ntBASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 CR559946.2-201ENST00000623684 991 ntBASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV9-2A0A087WT02 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 AP004609.3-201ENST00000610705 1884 ntBASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 LINC00565-201ENST00000562710 2331 ntBASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRAV9-2A0A087WT02 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 AC018358.1-201ENST00000631079 1402 ntBASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV9-2A0A087WT02 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 AC008813.1-201ENST00000536597 885 ntBASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 WHAMMP2-203ENST00000563942 1603 ntBASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV9-2A0A087WT02 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-2A0A087WT02 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-2A0A087WT02 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV9-2A0A087WT02 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRAV9-2A0A087WT02 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV9-2A0A087WT02 SLC25A24-204ENST00000569674 2357 ntBASIC17.33■□□□□ 0.37
TRAV9-2A0A087WT02 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV9-2A0A087WT02 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRAV9-2A0A087WT02 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV9-2A0A087WT02 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV9-2A0A087WT02 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAV9-2A0A087WT02 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 AC096887.2-201ENST00000623443 1957 ntBASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 MIR4449-201ENST00000578365 66 ntBASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRAV9-2A0A087WT02 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms