Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.13e-8■□□□□ 10.2
XRN2Q9H0D6 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.13e-8■□□□□ 10.2
XRN2Q9H0D6 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.13e-8■□□□□ 10.2
XRN2Q9H0D6 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.143e-8■□□□□ 10.2
XRN2Q9H0D6 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.163e-8■□□□□ 10.2
XRN2Q9H0D6 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.69□□□□□ -1.183e-8■□□□□ 10.2
XRN2Q9H0D6 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.183e-8■□□□□ 10.2
XRN2Q9H0D6 GAS5-229ENST00000458220 469 ntTSL 24.02□□□□□ -1.773e-8■□□□□ 10.2
XRN2Q9H0D6 ZNF687-207ENST00000459919 840 ntTSL 224.68■■□□□ 1.541e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.36■□□□□ 0.851e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.781e-7■□□□□ 10.2
XRN2Q9H0D6 CTSB-225ENST00000532409 839 ntTSL 218.33■□□□□ 0.521e-7■□□□□ 10.2
XRN2Q9H0D6 KLF6-203ENST00000461124 764 ntTSL 518.28■□□□□ 0.521e-7■□□□□ 10.2
XRN2Q9H0D6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.98■□□□□ 0.471e-7■□□□□ 10.2
XRN2Q9H0D6 CLUHP3-205ENST00000532304 1571 ntTSL 1 (best)17.52■□□□□ 0.391e-7■□□□□ 10.2
XRN2Q9H0D6 CTSB-218ENST00000530624 430 ntTSL 517.03■□□□□ 0.321e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-204ENST00000546630 544 ntTSL 1 (best)16.82■□□□□ 0.281e-7■□□□□ 10.2
XRN2Q9H0D6 ZNF687-202ENST00000336715 4831 ntAPPRIS P1 TSL 1 (best)16.52■□□□□ 0.241e-7■□□□□ 10.2
XRN2Q9H0D6 CTSB-203ENST00000420692 2230 ntTSL 216.27■□□□□ 0.21e-7■□□□□ 10.2
XRN2Q9H0D6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.11e-7■□□□□ 10.2
XRN2Q9H0D6 CLUHP3-203ENST00000431761 723 ntTSL 315.47■□□□□ 0.071e-7■□□□□ 10.2
XRN2Q9H0D6 CLUHP3-204ENST00000525610 1449 ntTSL 215.41■□□□□ 0.061e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-212ENST00000548725 582 ntTSL 215.1■□□□□ 0.011e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-208ENST00000547703 675 ntTSL 514.68□□□□□ -0.061e-7■□□□□ 10.2
XRN2Q9H0D6 NDRG1-216ENST00000521026 2145 ntTSL 214.15□□□□□ -0.141e-7■□□□□ 10.2
XRN2Q9H0D6 NDRG1-226ENST00000523642 507 ntTSL 314.03□□□□□ -0.161e-7■□□□□ 10.2
XRN2Q9H0D6 CLUHP3-207ENST00000563678 1303 ntBASIC13.99□□□□□ -0.171e-7■□□□□ 10.2
XRN2Q9H0D6 SLC23A2-203ENST00000423430 911 ntTSL 512.33□□□□□ -0.441e-7■□□□□ 10.2
XRN2Q9H0D6 CLUHP3-201ENST00000254109 1812 ntTSL 1 (best) BASIC12.27□□□□□ -0.451e-7■□□□□ 10.2
XRN2Q9H0D6 ZNF687-203ENST00000426871 3277 ntTSL 212.18□□□□□ -0.461e-7■□□□□ 10.2
XRN2Q9H0D6 ZNF687-206ENST00000449313 4185 ntTSL 511.79□□□□□ -0.521e-7■□□□□ 10.2
XRN2Q9H0D6 CTSB-227ENST00000533110 399 ntTSL 511.74□□□□□ -0.531e-7■□□□□ 10.2
XRN2Q9H0D6 SRC-207ENST00000477066 3300 ntTSL 211.73□□□□□ -0.531e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-217ENST00000550639 419 ntTSL 511.19□□□□□ -0.621e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6B-203ENST00000548571 223 ntTSL 410.52□□□□□ -0.731e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-214ENST00000549392 411 ntTSL 510.45□□□□□ -0.741e-7■□□□□ 10.2
XRN2Q9H0D6 MYL6-221ENST00000552297 454 ntTSL 38.19□□□□□ -1.11e-7■□□□□ 10.2
XRN2Q9H0D6 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.11e-7■□□□□ 10.2
XRN2Q9H0D6 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.121e-7■□□□□ 10.2
XRN2Q9H0D6 CTSB-216ENST00000530290 498 ntTSL 37.06□□□□□ -1.281e-7■□□□□ 10.2
XRN2Q9H0D6 RPL11-204ENST00000467075 377 ntTSL 314.46□□□□□ -0.096e-8■□□□□ 10.2
XRN2Q9H0D6 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.756e-8■□□□□ 10.2
XRN2Q9H0D6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.73□□□□□ -0.054e-6■□□□□ 10.2
XRN2Q9H0D6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.97□□□□□ -0.331e-8■□□□□ 10.2
XRN2Q9H0D6 HJURP-203ENST00000414924 1776 ntAPPRIS ALT2 TSL 420.49■□□□□ 0.871e-7■□□□□ 10.2
XRN2Q9H0D6 HJURP-208ENST00000453122 634 ntTSL 420.06■□□□□ 0.81e-7■□□□□ 10.2
XRN2Q9H0D6 HJURP-209ENST00000454020 806 ntTSL 514.21□□□□□ -0.131e-7■□□□□ 10.2
XRN2Q9H0D6 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.361e-7■□□□□ 10.2
XRN2Q9H0D6 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.461e-7■□□□□ 10.2
XRN2Q9H0D6 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.571e-7■□□□□ 10.2
XRN2Q9H0D6 RNASET2-208ENST00000496851 881 ntTSL 510.8□□□□□ -0.681e-7■□□□□ 10.2
XRN2Q9H0D6 RNASET2-209ENST00000499370 2164 ntTSL 210.58□□□□□ -0.721e-7■□□□□ 10.2
XRN2Q9H0D6 ZFR-204ENST00000505366 1159 ntTSL 1 (best)16.62■□□□□ 0.252e-7■□□□□ 10.2
XRN2Q9H0D6 ZFR-203ENST00000505204 552 ntTSL 414.36□□□□□ -0.112e-7■□□□□ 10.2
XRN2Q9H0D6 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.212e-7■□□□□ 10.2
XRN2Q9H0D6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.17■■□□□ 1.941e-15■□□□□ 10.2
XRN2Q9H0D6 CIRBP-209ENST00000586555 716 ntTSL 224.48■■□□□ 1.512e-30■□□□□ 10.2
XRN2Q9H0D6 CIRBP-220ENST00000588917 1087 ntTSL 222.29■■□□□ 1.162e-30■□□□□ 10.2
XRN2Q9H0D6 CIRBP-245ENST00000621399 1044 ntTSL 1 (best)21.36■■□□□ 1.012e-30■□□□□ 10.2
XRN2Q9H0D6 CIRBP-227ENST00000590188 361 ntTSL 321.36■■□□□ 1.012e-30■□□□□ 10.2
XRN2Q9H0D6 CIRBP-203ENST00000444172 584 ntTSL 320.45■□□□□ 0.862e-30■□□□□ 10.2
XRN2Q9H0D6 RBM39-212ENST00000429968 2149 ntTSL 214.05□□□□□ -0.161e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-216ENST00000444878 2124 ntTSL 214□□□□□ -0.171e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC13.88□□□□□ -0.191e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-245ENST00000639702 5914 ntTSL 512.46□□□□□ -0.411e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-223ENST00000463004 4580 ntTSL 512.29□□□□□ -0.441e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.491e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-202ENST00000338163 2792 ntTSL 211.67□□□□□ -0.541e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-206ENST00000403542 2883 ntTSL 211.63□□□□□ -0.551e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-230ENST00000476806 754 ntTSL 58.28□□□□□ -1.081e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-225ENST00000465158 825 ntTSL 27.3□□□□□ -1.241e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-237ENST00000492779 2316 ntTSL 27□□□□□ -1.291e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-244ENST00000615771 686 ntTSL 56.65□□□□□ -1.341e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-227ENST00000470563 384 ntTSL 35.76□□□□□ -1.491e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-240ENST00000495293 759 ntTSL 25.12□□□□□ -1.591e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-226ENST00000468086 549 ntTSL 44.9□□□□□ -1.631e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-217ENST00000448303 1008 ntTSL 54.66□□□□□ -1.661e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-229ENST00000475651 555 ntTSL 54.13□□□□□ -1.751e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.751e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-228ENST00000471635 549 ntTSL 24.09□□□□□ -1.751e-15■□□□□ 10.2
XRN2Q9H0D6 RBM39-221ENST00000461283 2415 ntTSL 53.1□□□□□ -1.911e-15■□□□□ 10.2
XRN2Q9H0D6 SHMT2-208ENST00000553868 941 ntTSL 217.29■□□□□ 0.363e-7■□□□□ 10.1
XRN2Q9H0D6 SHMT2-218ENST00000555213 611 ntTSL 312.46□□□□□ -0.413e-7■□□□□ 10.1
XRN2Q9H0D6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.181e-6■□□□□ 10.1
XRN2Q9H0D6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 11e-6■□□□□ 10.1
XRN2Q9H0D6 TMEM106A-206ENST00000592564 568 ntTSL 520.83■□□□□ 0.931e-6■□□□□ 10.1
XRN2Q9H0D6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.36■□□□□ 0.691e-6■□□□□ 10.1
XRN2Q9H0D6 TRIM41-203ENST00000503114 1904 ntTSL 1 (best)19.08■□□□□ 0.651e-6■□□□□ 10.1
XRN2Q9H0D6 TRIM41-206ENST00000514219 459 ntTSL 517.92■□□□□ 0.461e-6■□□□□ 10.1
XRN2Q9H0D6 AKT2-207ENST00000416362 974 ntTSL 517.14■□□□□ 0.331e-6■□□□□ 10.1
XRN2Q9H0D6 AKT2-211ENST00000427375 554 ntTSL 417.14■□□□□ 0.331e-6■□□□□ 10.1
XRN2Q9H0D6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.02■□□□□ 0.321e-6■□□□□ 10.1
XRN2Q9H0D6 AKT2-205ENST00000392037 681 ntTSL 216.95■□□□□ 0.31e-6■□□□□ 10.1
XRN2Q9H0D6 TRIM41-207ENST00000515223 5707 ntTSL 216.28■□□□□ 0.21e-6■□□□□ 10.1
XRN2Q9H0D6 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC14.83□□□□□ -0.041e-6■□□□□ 10.1
XRN2Q9H0D6 TMEM106A-205ENST00000588693 913 ntTSL 514.83□□□□□ -0.041e-6■□□□□ 10.1
XRN2Q9H0D6 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.071e-6■□□□□ 10.1
XRN2Q9H0D6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11e-6■□□□□ 10.1
XRN2Q9H0D6 NADK-217ENST00000498806 269 ntTSL 314.23□□□□□ -0.132e-8■□□□□ 10.1
XRN2Q9H0D6 TRIM41-204ENST00000508930 3834 ntTSL 1 (best)13.65□□□□□ -0.221e-6■□□□□ 10.1
Retrieved 100 of 21,068 protein–RNA pairs in 104.1 ms