RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
TRIM41-204ENST00000508930 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
TRIM41-204ENST00000508930 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.47
TRIM41-204ENST00000508930 HRCP23327 699 aa23.89■■□□□ 1.42
TRIM41-204ENST00000508930 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
TRIM41-204ENST00000508930 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
TRIM41-204ENST00000508930 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
TRIM41-204ENST00000508930 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
TRIM41-204ENST00000508930 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
TRIM41-204ENST00000508930 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
TRIM41-204ENST00000508930 ZCCHC6Q5VYS8 1495 aaKnown RBP23.01■■□□□ 1.27
TRIM41-204ENST00000508930 TRIM26Q12899 539 aaPredicted RBP22.9■■□□□ 1.26
TRIM41-204ENST00000508930 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
TRIM41-204ENST00000508930 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
TRIM41-204ENST00000508930 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
TRIM41-204ENST00000508930 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
TRIM41-204ENST00000508930 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.18
TRIM41-204ENST00000508930 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
TRIM41-204ENST00000508930 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
TRIM41-204ENST00000508930 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
TRIM41-204ENST00000508930 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
TRIM41-204ENST00000508930 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
TRIM41-204ENST00000508930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
TRIM41-204ENST00000508930 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
TRIM41-204ENST00000508930 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
TRIM41-204ENST00000508930 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
TRIM41-204ENST00000508930 MYT1Q01538 1121 aa21.92■■□□□ 1.1
TRIM41-204ENST00000508930 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
TRIM41-204ENST00000508930 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
TRIM41-204ENST00000508930 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
TRIM41-204ENST00000508930 ABCC9O60706 1549 aa21.79■■□□□ 1.08
TRIM41-204ENST00000508930 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
TRIM41-204ENST00000508930 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
TRIM41-204ENST00000508930 SCRIBQ14160 1630 aa21.64■■□□□ 1.06
TRIM41-204ENST00000508930 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
TRIM41-204ENST00000508930 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
TRIM41-204ENST00000508930 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
TRIM41-204ENST00000508930 MIER1Q8N108 512 aa21.28■■□□□ 1
TRIM41-204ENST00000508930 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
TRIM41-204ENST00000508930 MROH2BQ7Z745 1585 aa21.22■□□□□ 0.99
TRIM41-204ENST00000508930 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
TRIM41-204ENST00000508930 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.974e-9■■□□□ 14.1
TRIM41-204ENST00000508930 APLP2Q06481 763 aa21.1■□□□□ 0.97
TRIM41-204ENST00000508930 WIZO95785 1651 aa21.1■□□□□ 0.97
TRIM41-204ENST00000508930 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
TRIM41-204ENST00000508930 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
TRIM41-204ENST00000508930 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
TRIM41-204ENST00000508930 SOGA1O94964 1423 aa21■□□□□ 0.95
TRIM41-204ENST00000508930 ABCC8Q09428 1581 aa21■□□□□ 0.95
TRIM41-204ENST00000508930 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
TRIM41-204ENST00000508930 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.94
TRIM41-204ENST00000508930 EEA1Q15075 1411 aa20.87■□□□□ 0.93
TRIM41-204ENST00000508930 NACADO15069 1562 aa20.86■□□□□ 0.93
TRIM41-204ENST00000508930 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
TRIM41-204ENST00000508930 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
TRIM41-204ENST00000508930 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
TRIM41-204ENST00000508930 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
TRIM41-204ENST00000508930 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
TRIM41-204ENST00000508930 CLIP1P30622 1438 aa20.75■□□□□ 0.91
TRIM41-204ENST00000508930 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
TRIM41-204ENST00000508930 BCANQ96GW7 911 aa20.68■□□□□ 0.9
TRIM41-204ENST00000508930 ANP32EQ9BTT0 268 aa20.67■□□□□ 0.9
TRIM41-204ENST00000508930 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
TRIM41-204ENST00000508930 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
TRIM41-204ENST00000508930 VPS8Q8N3P4 1428 aa20.62■□□□□ 0.89
TRIM41-204ENST00000508930 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
TRIM41-204ENST00000508930 ITGAEP38570 1179 aa20.58■□□□□ 0.89
TRIM41-204ENST00000508930 NEFLP07196 543 aa20.53■□□□□ 0.88
TRIM41-204ENST00000508930 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRIM41-204ENST00000508930 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
TRIM41-204ENST00000508930 FKBP8Q14318 412 aa20.51■□□□□ 0.87
TRIM41-204ENST00000508930 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
TRIM41-204ENST00000508930 BCL11AQ9H165 835 aa20.45■□□□□ 0.86
TRIM41-204ENST00000508930 KCNH8Q96L42 1107 aa20.44■□□□□ 0.86
TRIM41-204ENST00000508930 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
TRIM41-204ENST00000508930 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
TRIM41-204ENST00000508930 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
TRIM41-204ENST00000508930 KIF21BO75037 1637 aa20.38■□□□□ 0.85
TRIM41-204ENST00000508930 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
TRIM41-204ENST00000508930 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
TRIM41-204ENST00000508930 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
TRIM41-204ENST00000508930 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
TRIM41-204ENST00000508930 ERICH6Q7L0X2 663 aa20.27■□□□□ 0.84
TRIM41-204ENST00000508930 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
TRIM41-204ENST00000508930 ANP32CO43423 234 aa20.22■□□□□ 0.83
TRIM41-204ENST00000508930 HIRIP3Q9BW71 556 aaPredicted RBP20.2■□□□□ 0.82
TRIM41-204ENST00000508930 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
TRIM41-204ENST00000508930 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
TRIM41-204ENST00000508930 RAB3GAP2Q9H2M9 1393 aa20.15■□□□□ 0.82
TRIM41-204ENST00000508930 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
TRIM41-204ENST00000508930 RRBP1Q9P2E9 1410 aaKnown RBP20.12■□□□□ 0.81
TRIM41-204ENST00000508930 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
TRIM41-204ENST00000508930 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
TRIM41-204ENST00000508930 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
TRIM41-204ENST00000508930 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
TRIM41-204ENST00000508930 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
TRIM41-204ENST00000508930 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
TRIM41-204ENST00000508930 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
TRIM41-204ENST00000508930 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
TRIM41-204ENST00000508930 CUX2O14529 1486 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms