RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
TRIM41-207ENST00000515223 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.86
TRIM41-207ENST00000515223 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
TRIM41-207ENST00000515223 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
TRIM41-207ENST00000515223 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
TRIM41-207ENST00000515223 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
TRIM41-207ENST00000515223 APLP2Q06481 763 aa25.36■■□□□ 1.65
TRIM41-207ENST00000515223 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
TRIM41-207ENST00000515223 PCGF6Q9BYE7 350 aa24.98■■□□□ 1.59
TRIM41-207ENST00000515223 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
TRIM41-207ENST00000515223 ATP1B4Q9UN42 357 aaPredicted RBP24.48■■□□□ 1.51
TRIM41-207ENST00000515223 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
TRIM41-207ENST00000515223 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
TRIM41-207ENST00000515223 HRCP23327 699 aa24.17■■□□□ 1.46
TRIM41-207ENST00000515223 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
TRIM41-207ENST00000515223 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
TRIM41-207ENST00000515223 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
TRIM41-207ENST00000515223 ERICH6Q7L0X2 663 aa23.99■■□□□ 1.43
TRIM41-207ENST00000515223 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
TRIM41-207ENST00000515223 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
TRIM41-207ENST00000515223 MYT1LQ9UL68 1186 aa23.87■■□□□ 1.41
TRIM41-207ENST00000515223 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
TRIM41-207ENST00000515223 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
TRIM41-207ENST00000515223 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
TRIM41-207ENST00000515223 YTHDC1Q96MU7 727 aaKnown RBP23.75■■□□□ 1.39
TRIM41-207ENST00000515223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
TRIM41-207ENST00000515223 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
TRIM41-207ENST00000515223 NEFLP07196 543 aa23.72■■□□□ 1.39
TRIM41-207ENST00000515223 POLR3GLQ9BT43 218 aa23.38■■□□□ 1.33
TRIM41-207ENST00000515223 ITGAEP38570 1179 aa23.37■■□□□ 1.33
TRIM41-207ENST00000515223 MYT1Q01538 1121 aa23.37■■□□□ 1.33
TRIM41-207ENST00000515223 DAXXQ9UER7 740 aaPredicted RBP23.19■■□□□ 1.3
TRIM41-207ENST00000515223 SLC4A1APQ9BWU0 796 aaKnown RBP23.16■■□□□ 1.3
TRIM41-207ENST00000515223 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
TRIM41-207ENST00000515223 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
TRIM41-207ENST00000515223 GTF3C3Q9Y5Q9 886 aa22.9■■□□□ 1.26
TRIM41-207ENST00000515223 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
TRIM41-207ENST00000515223 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
TRIM41-207ENST00000515223 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
TRIM41-207ENST00000515223 FBLN2P98095 1184 aa22.75■■□□□ 1.23
TRIM41-207ENST00000515223 CLSPNQ9HAW4 1339 aa22.73■■□□□ 1.23
TRIM41-207ENST00000515223 ABCC9O60706 1549 aa22.69■■□□□ 1.22
TRIM41-207ENST00000515223 ACIN1Q9UKV3 1341 aaKnown RBP22.64■■□□□ 1.22
TRIM41-207ENST00000515223 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
TRIM41-207ENST00000515223 BCANQ96GW7 911 aa22.54■■□□□ 1.2
TRIM41-207ENST00000515223 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
TRIM41-207ENST00000515223 ZBTB47Q9UFB7 747 aaPredicted RBP22.52■■□□□ 1.19
TRIM41-207ENST00000515223 DCAF1Q9Y4B6 1507 aa22.51■■□□□ 1.19
TRIM41-207ENST00000515223 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
TRIM41-207ENST00000515223 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
TRIM41-207ENST00000515223 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
TRIM41-207ENST00000515223 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
TRIM41-207ENST00000515223 NEFMP07197 916 aa22.41■■□□□ 1.18
TRIM41-207ENST00000515223 ESF1Q9H501 851 aaKnown RBP22.39■■□□□ 1.18
TRIM41-207ENST00000515223 RTL5Q5HYW3 569 aaPredicted RBP22.36■■□□□ 1.17
TRIM41-207ENST00000515223 CDK11AQ9UQ88 783 aaPredicted RBP22.26■■□□□ 1.15
TRIM41-207ENST00000515223 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
TRIM41-207ENST00000515223 ANP32CO43423 234 aa22.24■■□□□ 1.15
TRIM41-207ENST00000515223 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
TRIM41-207ENST00000515223 CANXP27824 592 aaKnown RBP22.22■■□□□ 1.15
TRIM41-207ENST00000515223 NPM1P06748 294 aaKnown RBP eCLIP22.21■■□□□ 1.15
TRIM41-207ENST00000515223 ZNF777Q9ULD5 760 aaPredicted RBP22.2■■□□□ 1.14
TRIM41-207ENST00000515223 P3H3Q8IVL6 736 aa22.18■■□□□ 1.14
TRIM41-207ENST00000515223 STAG3Q9UJ98 1225 aa22.15■■□□□ 1.14
TRIM41-207ENST00000515223 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
TRIM41-207ENST00000515223 CHGAP10645 457 aaKnown RBP22.03■■□□□ 1.12
TRIM41-207ENST00000515223 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
TRIM41-207ENST00000515223 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
TRIM41-207ENST00000515223 SCRIBQ14160 1630 aa21.95■■□□□ 1.11
TRIM41-207ENST00000515223 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
TRIM41-207ENST00000515223 MIER1Q8N108 512 aa21.91■■□□□ 1.1
TRIM41-207ENST00000515223 FKBP8Q14318 412 aa21.87■■□□□ 1.09
TRIM41-207ENST00000515223 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
TRIM41-207ENST00000515223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.7■■□□□ 1.066e-9■■■■□ 23.1
TRIM41-207ENST00000515223 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
TRIM41-207ENST00000515223 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
TRIM41-207ENST00000515223 DDX10Q13206 875 aaKnown RBP21.69■■□□□ 1.06
TRIM41-207ENST00000515223 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
TRIM41-207ENST00000515223 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
TRIM41-207ENST00000515223 ANP32AP39687 249 aaKnown RBP21.62■■□□□ 1.05
TRIM41-207ENST00000515223 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
TRIM41-207ENST00000515223 A0A0G2JS52 829 aa21.59■■□□□ 1.05
TRIM41-207ENST00000515223 UPF2Q9HAU5 1272 aaKnown RBP21.57■■□□□ 1.04
TRIM41-207ENST00000515223 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
TRIM41-207ENST00000515223 CHIC2Q9UKJ5 165 aa21.55■■□□□ 1.04
TRIM41-207ENST00000515223 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
TRIM41-207ENST00000515223 ANP32BQ92688 251 aaKnown RBP21.52■■□□□ 1.04
TRIM41-207ENST00000515223 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
TRIM41-207ENST00000515223 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
TRIM41-207ENST00000515223 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
TRIM41-207ENST00000515223 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
TRIM41-207ENST00000515223 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRIM41-207ENST00000515223 IRX6P78412 446 aaPredicted RBP21.47■■□□□ 1.03
TRIM41-207ENST00000515223 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
TRIM41-207ENST00000515223 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
TRIM41-207ENST00000515223 MTUS2Q5JR59 1369 aa21.46■■□□□ 1.03
TRIM41-207ENST00000515223 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
TRIM41-207ENST00000515223 FAM9BQ8IZU0 186 aa21.43■■□□□ 1.02
TRIM41-207ENST00000515223 SALL2Q9Y467 1007 aaPredicted RBP21.42■■□□□ 1.02
TRIM41-207ENST00000515223 CLIP1P30622 1438 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms