RNA–Protein interactions for RNA: ENST00000374550.7

RPL11-201, Transcript of ribosomal protein L11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL11, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL11-201ENST00000374550 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
RPL11-201ENST00000374550 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
RPL11-201ENST00000374550 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
RPL11-201ENST00000374550 ABCC9O60706 1549 aa18.57■□□□□ 0.56
RPL11-201ENST00000374550 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
RPL11-201ENST00000374550 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
RPL11-201ENST00000374550 NACADO15069 1562 aa18.3■□□□□ 0.52
RPL11-201ENST00000374550 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
RPL11-201ENST00000374550 DCAF8L2P0C7V8 631 aa18.04■□□□□ 0.48
RPL11-201ENST00000374550 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
RPL11-201ENST00000374550 SCRIBQ14160 1630 aa17.81■□□□□ 0.44
RPL11-201ENST00000374550 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
RPL11-201ENST00000374550 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
RPL11-201ENST00000374550 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
RPL11-201ENST00000374550 CECR2Q9BXF3 1484 aa17.3■□□□□ 0.36
RPL11-201ENST00000374550 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
RPL11-201ENST00000374550 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
RPL11-201ENST00000374550 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
RPL11-201ENST00000374550 RSF1Q96T23 1441 aaPredicted RBP17.17■□□□□ 0.34
RPL11-201ENST00000374550 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
RPL11-201ENST00000374550 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
RPL11-201ENST00000374550 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
RPL11-201ENST00000374550 WIZO95785 1651 aa16.97■□□□□ 0.31
RPL11-201ENST00000374550 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
RPL11-201ENST00000374550 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
RPL11-201ENST00000374550 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
RPL11-201ENST00000374550 HMGXB3Q12766 1538 aa16.88■□□□□ 0.29
RPL11-201ENST00000374550 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
RPL11-201ENST00000374550 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
RPL11-201ENST00000374550 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
RPL11-201ENST00000374550 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
RPL11-201ENST00000374550 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
RPL11-201ENST00000374550 CFTRP13569 1480 aa16.45■□□□□ 0.22
RPL11-201ENST00000374550 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
RPL11-201ENST00000374550 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
RPL11-201ENST00000374550 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
RPL11-201ENST00000374550 NESP48681 1621 aa16.28■□□□□ 0.2
RPL11-201ENST00000374550 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
RPL11-201ENST00000374550 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
RPL11-201ENST00000374550 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
RPL11-201ENST00000374550 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
RPL11-201ENST00000374550 KIF21AQ7Z4S6 1674 aa16.1■□□□□ 0.17
RPL11-201ENST00000374550 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.172e-15■■■□□ 14.9
RPL11-201ENST00000374550 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
RPL11-201ENST00000374550 CUX1P39880 1505 aa16.09■□□□□ 0.17
RPL11-201ENST00000374550 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.17
RPL11-201ENST00000374550 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
RPL11-201ENST00000374550 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
RPL11-201ENST00000374550 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
RPL11-201ENST00000374550 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
RPL11-201ENST00000374550 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
RPL11-201ENST00000374550 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
RPL11-201ENST00000374550 TOPBP1Q92547 1522 aa16■□□□□ 0.15
RPL11-201ENST00000374550 WDR62O43379 1518 aa15.99■□□□□ 0.15
RPL11-201ENST00000374550 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
RPL11-201ENST00000374550 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
RPL11-201ENST00000374550 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
RPL11-201ENST00000374550 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
RPL11-201ENST00000374550 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
RPL11-201ENST00000374550 CUX2O14529 1486 aa15.87■□□□□ 0.13
RPL11-201ENST00000374550 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
RPL11-201ENST00000374550 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
RPL11-201ENST00000374550 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
RPL11-201ENST00000374550 SOGA1O94964 1423 aa15.79■□□□□ 0.12
RPL11-201ENST00000374550 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
RPL11-201ENST00000374550 EEA1Q15075 1411 aa15.77■□□□□ 0.11
RPL11-201ENST00000374550 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
RPL11-201ENST00000374550 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
RPL11-201ENST00000374550 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
RPL11-201ENST00000374550 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
RPL11-201ENST00000374550 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
RPL11-201ENST00000374550 IGF1RP08069 1367 aa15.65■□□□□ 0.1
RPL11-201ENST00000374550 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
RPL11-201ENST00000374550 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
RPL11-201ENST00000374550 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
RPL11-201ENST00000374550 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
RPL11-201ENST00000374550 KIF21BO75037 1637 aa15.61■□□□□ 0.09
RPL11-201ENST00000374550 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
RPL11-201ENST00000374550 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
RPL11-201ENST00000374550 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.092e-13■■■■■ 34.1
RPL11-201ENST00000374550 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
RPL11-201ENST00000374550 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
RPL11-201ENST00000374550 CUL7Q14999 1698 aa15.55■□□□□ 0.08
RPL11-201ENST00000374550 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
RPL11-201ENST00000374550 MAGI1Q96QZ7 1491 aaPredicted RBP15.5■□□□□ 0.07
RPL11-201ENST00000374550 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
RPL11-201ENST00000374550 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
RPL11-201ENST00000374550 FAM9AQ8IZU1 332 aaPredicted RBP15.48■□□□□ 0.07
RPL11-201ENST00000374550 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
RPL11-201ENST00000374550 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
RPL11-201ENST00000374550 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
RPL11-201ENST00000374550 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
RPL11-201ENST00000374550 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
RPL11-201ENST00000374550 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
RPL11-201ENST00000374550 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
RPL11-201ENST00000374550 NUP160Q12769 1436 aa15.37■□□□□ 0.05
RPL11-201ENST00000374550 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
RPL11-201ENST00000374550 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
RPL11-201ENST00000374550 CHD1O14646 1710 aa15.29■□□□□ 0.04
RPL11-201ENST00000374550 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms