RNA–Protein interactions for RNA: ENST00000265069.12

ZFR-201, Transcript of zinc finger RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFR, Length 4,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFR-201ENST00000265069 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
ZFR-201ENST00000265069 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
ZFR-201ENST00000265069 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
ZFR-201ENST00000265069 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
ZFR-201ENST00000265069 ABCC9O60706 1549 aa21.82■■□□□ 1.08
ZFR-201ENST00000265069 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
ZFR-201ENST00000265069 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
ZFR-201ENST00000265069 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
ZFR-201ENST00000265069 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
ZFR-201ENST00000265069 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
ZFR-201ENST00000265069 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
ZFR-201ENST00000265069 NACADO15069 1562 aa20.73■□□□□ 0.91
ZFR-201ENST00000265069 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
ZFR-201ENST00000265069 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
ZFR-201ENST00000265069 APLP2Q06481 763 aa20.64■□□□□ 0.89
ZFR-201ENST00000265069 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
ZFR-201ENST00000265069 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
ZFR-201ENST00000265069 RANGAP1P46060 587 aaPredicted RBP20.25■□□□□ 0.83
ZFR-201ENST00000265069 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
ZFR-201ENST00000265069 ATP1B4Q9UN42 357 aaPredicted RBP20.15■□□□□ 0.82
ZFR-201ENST00000265069 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
ZFR-201ENST00000265069 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.78
ZFR-201ENST00000265069 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
ZFR-201ENST00000265069 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
ZFR-201ENST00000265069 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
ZFR-201ENST00000265069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
ZFR-201ENST00000265069 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
ZFR-201ENST00000265069 FBLN2P98095 1184 aa19.75■□□□□ 0.75
ZFR-201ENST00000265069 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
ZFR-201ENST00000265069 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
ZFR-201ENST00000265069 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.74
ZFR-201ENST00000265069 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
ZFR-201ENST00000265069 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
ZFR-201ENST00000265069 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
ZFR-201ENST00000265069 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
ZFR-201ENST00000265069 ERCC6Q03468 1493 aa19.46■□□□□ 0.71
ZFR-201ENST00000265069 PPARGC1BQ86YN6 1023 aaKnown RBP19.4■□□□□ 0.7
ZFR-201ENST00000265069 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
ZFR-201ENST00000265069 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
ZFR-201ENST00000265069 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
ZFR-201ENST00000265069 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
ZFR-201ENST00000265069 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
ZFR-201ENST00000265069 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
ZFR-201ENST00000265069 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
ZFR-201ENST00000265069 ITGAEP38570 1179 aa19.28■□□□□ 0.68
ZFR-201ENST00000265069 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
ZFR-201ENST00000265069 EEA1Q15075 1411 aa19.28■□□□□ 0.68
ZFR-201ENST00000265069 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
ZFR-201ENST00000265069 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
ZFR-201ENST00000265069 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
ZFR-201ENST00000265069 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
ZFR-201ENST00000265069 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
ZFR-201ENST00000265069 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
ZFR-201ENST00000265069 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
ZFR-201ENST00000265069 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
ZFR-201ENST00000265069 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.66
ZFR-201ENST00000265069 WIZO95785 1651 aa19.14■□□□□ 0.66
ZFR-201ENST00000265069 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
ZFR-201ENST00000265069 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
ZFR-201ENST00000265069 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
ZFR-201ENST00000265069 CUX2O14529 1486 aa18.98■□□□□ 0.63
ZFR-201ENST00000265069 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
ZFR-201ENST00000265069 SOGA1O94964 1423 aa18.97■□□□□ 0.63
ZFR-201ENST00000265069 ABCC8Q09428 1581 aa18.94■□□□□ 0.62
ZFR-201ENST00000265069 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
ZFR-201ENST00000265069 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
ZFR-201ENST00000265069 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
ZFR-201ENST00000265069 CLIP1P30622 1438 aa18.9■□□□□ 0.62
ZFR-201ENST00000265069 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
ZFR-201ENST00000265069 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
ZFR-201ENST00000265069 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
ZFR-201ENST00000265069 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
ZFR-201ENST00000265069 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
ZFR-201ENST00000265069 PLEKHD1A6NEE1 506 aa18.81■□□□□ 0.6
ZFR-201ENST00000265069 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
ZFR-201ENST00000265069 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
ZFR-201ENST00000265069 ESF1Q9H501 851 aaKnown RBP18.73■□□□□ 0.59
ZFR-201ENST00000265069 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
ZFR-201ENST00000265069 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
ZFR-201ENST00000265069 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
ZFR-201ENST00000265069 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
ZFR-201ENST00000265069 CFTRP13569 1480 aa18.68■□□□□ 0.58
ZFR-201ENST00000265069 KCNH8Q96L42 1107 aa18.65■□□□□ 0.58
ZFR-201ENST00000265069 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
ZFR-201ENST00000265069 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
ZFR-201ENST00000265069 RAPGEF2Q9Y4G8 1499 aa18.57■□□□□ 0.56
ZFR-201ENST00000265069 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
ZFR-201ENST00000265069 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
ZFR-201ENST00000265069 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
ZFR-201ENST00000265069 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
ZFR-201ENST00000265069 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
ZFR-201ENST00000265069 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
ZFR-201ENST00000265069 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.56
ZFR-201ENST00000265069 NESP48681 1621 aa18.52■□□□□ 0.55
ZFR-201ENST00000265069 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
ZFR-201ENST00000265069 JPH4Q96JJ6 628 aa18.51■□□□□ 0.55
ZFR-201ENST00000265069 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
ZFR-201ENST00000265069 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
ZFR-201ENST00000265069 HRCP23327 699 aa18.46■□□□□ 0.55
ZFR-201ENST00000265069 CHIC2Q9UKJ5 165 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms