RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
CTSB-216ENST00000530290 ABCC9O60706 1549 aa13.18□□□□□ -0.3
CTSB-216ENST00000530290 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
CTSB-216ENST00000530290 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
CTSB-216ENST00000530290 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
CTSB-216ENST00000530290 NACADO15069 1562 aa12.47□□□□□ -0.41
CTSB-216ENST00000530290 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
CTSB-216ENST00000530290 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
CTSB-216ENST00000530290 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
CTSB-216ENST00000530290 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
CTSB-216ENST00000530290 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
CTSB-216ENST00000530290 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
CTSB-216ENST00000530290 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
CTSB-216ENST00000530290 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
CTSB-216ENST00000530290 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
CTSB-216ENST00000530290 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
CTSB-216ENST00000530290 ZCCHC6Q5VYS8 1495 aaKnown RBP11.94□□□□□ -0.5
CTSB-216ENST00000530290 EIF4G1Q04637 1599 aaKnown RBP11.91□□□□□ -0.5
CTSB-216ENST00000530290 SCRIBQ14160 1630 aa11.82□□□□□ -0.52
CTSB-216ENST00000530290 CUX2O14529 1486 aa11.61□□□□□ -0.55
CTSB-216ENST00000530290 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
CTSB-216ENST00000530290 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
CTSB-216ENST00000530290 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
CTSB-216ENST00000530290 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
CTSB-216ENST00000530290 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
CTSB-216ENST00000530290 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
CTSB-216ENST00000530290 SMARCA4P51532 1647 aa11.32□□□□□ -0.6
CTSB-216ENST00000530290 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
CTSB-216ENST00000530290 LAMC3Q9Y6N6 1575 aa11.29□□□□□ -0.6
CTSB-216ENST00000530290 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
CTSB-216ENST00000530290 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
CTSB-216ENST00000530290 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
CTSB-216ENST00000530290 NESP48681 1621 aa11.23□□□□□ -0.61
CTSB-216ENST00000530290 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
CTSB-216ENST00000530290 KIF21AQ7Z4S6 1674 aa11.17□□□□□ -0.62
CTSB-216ENST00000530290 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
CTSB-216ENST00000530290 WDR62O43379 1518 aa11.1□□□□□ -0.63
CTSB-216ENST00000530290 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
CTSB-216ENST00000530290 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
CTSB-216ENST00000530290 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
CTSB-216ENST00000530290 AEBP2Q6ZN18 517 aaPredicted RBP10.97□□□□□ -0.65
CTSB-216ENST00000530290 FANCD2Q9BXW9 1451 aa10.94□□□□□ -0.66
CTSB-216ENST00000530290 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
CTSB-216ENST00000530290 CFTRP13569 1480 aa10.93□□□□□ -0.66
CTSB-216ENST00000530290 WIZO95785 1651 aa10.91□□□□□ -0.66
CTSB-216ENST00000530290 PRDM2Q13029 1718 aa10.9□□□□□ -0.66
CTSB-216ENST00000530290 RIMBP3CA6NJZ7 1639 aa10.86□□□□□ -0.67
CTSB-216ENST00000530290 RIMBP3BA6NNM3 1639 aa10.86□□□□□ -0.67
CTSB-216ENST00000530290 RIMBP3Q9UFD9 1639 aa10.86□□□□□ -0.67
CTSB-216ENST00000530290 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
CTSB-216ENST00000530290 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
CTSB-216ENST00000530290 IFT140Q96RY7 1462 aa10.82□□□□□ -0.68
CTSB-216ENST00000530290 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
CTSB-216ENST00000530290 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
CTSB-216ENST00000530290 ABCC8Q09428 1581 aa10.78□□□□□ -0.68
CTSB-216ENST00000530290 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
CTSB-216ENST00000530290 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
CTSB-216ENST00000530290 CYB5RLQ6IPT4 315 aa10.74□□□□□ -0.69
CTSB-216ENST00000530290 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
CTSB-216ENST00000530290 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
CTSB-216ENST00000530290 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
CTSB-216ENST00000530290 ZNF608Q9ULD9 1512 aaPredicted RBP10.7□□□□□ -0.7
CTSB-216ENST00000530290 CHD1O14646 1710 aa10.68□□□□□ -0.7
CTSB-216ENST00000530290 WDR97A6NE52 1622 aa10.68□□□□□ -0.7
CTSB-216ENST00000530290 ARAP1Q96P48 1450 aa10.65□□□□□ -0.7
CTSB-216ENST00000530290 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.7
CTSB-216ENST00000530290 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
CTSB-216ENST00000530290 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
CTSB-216ENST00000530290 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
CTSB-216ENST00000530290 MAGI1Q96QZ7 1491 aaPredicted RBP10.57□□□□□ -0.72
CTSB-216ENST00000530290 CLASP1Q7Z460 1538 aa10.57□□□□□ -0.72
CTSB-216ENST00000530290 AQRO60306 1485 aaKnown RBP eCLIP10.56□□□□□ -0.722e-8■■□□□ 13.8
CTSB-216ENST00000530290 SNAPC4Q5SXM2 1469 aa10.52□□□□□ -0.73
CTSB-216ENST00000530290 FBLN2P98095 1184 aa10.51□□□□□ -0.73
CTSB-216ENST00000530290 SOGA1O94964 1423 aa10.5□□□□□ -0.73
CTSB-216ENST00000530290 SYNJ2O15056 1496 aa10.5□□□□□ -0.73
CTSB-216ENST00000530290 GRIN2BQ13224 1484 aa10.5□□□□□ -0.73
CTSB-216ENST00000530290 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
CTSB-216ENST00000530290 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
CTSB-216ENST00000530290 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
CTSB-216ENST00000530290 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.74
CTSB-216ENST00000530290 PBRM1Q86U86 1689 aa10.46□□□□□ -0.74
CTSB-216ENST00000530290 GAPVD1Q14C86 1478 aa10.44□□□□□ -0.74
CTSB-216ENST00000530290 CUX1P39880 1505 aa10.42□□□□□ -0.74
CTSB-216ENST00000530290 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.74
CTSB-216ENST00000530290 ABCA10Q8WWZ4 1543 aa10.4□□□□□ -0.74
CTSB-216ENST00000530290 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
CTSB-216ENST00000530290 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
CTSB-216ENST00000530290 SHROOM2Q13796 1616 aa10.35□□□□□ -0.75
CTSB-216ENST00000530290 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
CTSB-216ENST00000530290 NUP160Q12769 1436 aa10.34□□□□□ -0.75
CTSB-216ENST00000530290 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
CTSB-216ENST00000530290 KIF13AQ9H1H9 1805 aa10.31□□□□□ -0.76
CTSB-216ENST00000530290 FHAD1B1AJZ9 1412 aa10.3□□□□□ -0.76
CTSB-216ENST00000530290 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
CTSB-216ENST00000530290 ERICH3Q5RHP9 1530 aa10.29□□□□□ -0.76
CTSB-216ENST00000530290 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.76
CTSB-216ENST00000530290 BIVM-ERCC5R4GMW8 1640 aa10.27□□□□□ -0.77
CTSB-216ENST00000530290 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
CTSB-216ENST00000530290 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms